Geospiza fortis (medium ground-finch): 102037591
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Entry
102037591 CDS
T03755
Symbol
VCL
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04510
Focal adhesion
gfr04520
Adherens junction
gfr04810
Regulation of actin cytoskeleton
gfr04820
Cytoskeleton in muscle cells
gfr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102037591 (VCL)
04520 Adherens junction
102037591 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102037591 (VCL)
04810 Regulation of actin cytoskeleton
102037591 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102037591 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gfr04812
]
102037591 (VCL)
04147 Exosome [BR:
gfr04147
]
102037591 (VCL)
Cytoskeleton proteins [BR:
gfr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102037591 (VCL)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102037591 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
102037591
NCBI-ProteinID:
XP_014165244
UniProt:
A0A6I9ZB36
LinkDB
All DBs
Position
Un
AA seq
993 aa
AA seq
DB search
MPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRK
IIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVN
SMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSW
DEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIRQILDEAGKAGELC
AGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARK
LEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKVAELCEEPKERDDILR
SLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHL
EGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQELLARCDRVEQLSA
QLAELAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAA
TAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVEGIQATVKSARELTP
QVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKD
LDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKT
ISPMVMDAKAVAGNISDPGLQKSFLDSGYKILGAVAKVREAFQPQEPDFPPPPPDLEHLH
LTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMMAARQLHDEARKWS
SKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEVTRLAKEVAKQCT
DKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQS
VKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgccgccagcatttatcaaagtggagaatgcctgcaccaagctggtgcgggcagcccag
atgctgcaggcagacccttactcagtaccagctcgtgattatctcattgatggctcgaga
ggaatcctttctggaacatcagacttgctcctgacattcgatgaagcagaggtccgtaaa
atcatccgtgtctgcaaaggaatattggaatatttgactgtggcagaagtggtcgagaca
atggaggatctggtgacttacacaaagaatttagggccaggaatgacaaagatggccaaa
atgattgacgagcgacaacaggaattaactcatcaggaacatagggttatgctggtaaac
tccatgaatacagtcaaggagctattgccagtacttatttcagctatgaagatttttgta
accacaaaaaattctaaaagccagggaatagaagaggccttgaaaaatcgcaatttcaca
gtagagaaaatgagtgctgagataaacgaaataattcgtgtgttacaactcacttcctgg
gatgaagatgcctgggcaagcaaggacactgaagccatgaagagagctttagccttaata
gattcaaagatgaatcaggcaaaaggttggctgagagatccaaatgcacctccaggggat
gctggtgagcaggccataaggcagatccttgatgaagctggcaaagcaggagagctgtgt
gcaggcaaagagcgcagagagatcctgggcacgtgcaaaaccctggggcagatgacagat
cagctggctgacctccgggccagaggacagggtgccacacccatggccatgcagaaagcc
cagcaggtgtcccaggggctggacctgctcactgccaaggtggagaacgcagcccgcaag
ctggaggccatgaccaactccaagcaggcaattgctaagaaaattgatgctgctcagaat
tggcttgcagatcctaatgggggcagtgaaggggaggagcatattcggggaattatggct
gaagcaaggaaagttgcagaactgtgtgaggagcctaaagagagagatgacatcctgcgt
tccttgggggagatctctgctttgacagccaagctgtcagatctgcgacgacatgggaaa
ggtgattctcctgaggcccgtgctttggctaagcaaatagctacatcacttcagaattta
cagtccaaaacaaacagggctgtagcaaataccaggccagttaaagcagctgtccatttg
gagggcaagattgaacaagctcagaggtggatagacaatcccacagttgctgatagggga
gtaggccaggctgccatccgcgggctggttgccgaaggccggcgcttggccaacgtcatg
atgggcccgtaccggcaggagctgctggcccggtgtgaccgcgtggagcagctctctgcc
cagctggccgagctggctgcccgcggggagggcgagtccccgcaggccagggccattgca
gctcagctccaggactcactgaaggatcttaaagcacgaatgcaagaagcaatgacccag
gaagtttctgatgtttttagtgacaccacaactcctattaaattgttagcagtagcagcc
actgctccctctgatgctcccaacagagatgaggtgtttgatgaaagagcagcaaacttt
gaaaaccatgctgctagactgggagctacagcagaaaaagcagctgcagttggaactgcc
aataaaactactgtggagggcattcaggcaacggtgaaatcagcaagggaactcacccca
caggtagtatcagcagctcgtatcctcttgagaaatcctggaaatcaagctgcttatgaa
cattttgagaccatgaaaaaccagtggattgataatgtagagaaaatgaccgggttggtg
gatgaagccatcgatactaaatctctgttggatgcatcagaagaagccattaagaaggac
ctggacaaatgtaaagttgcaatggccaacatgcagcctcagatgctggtagctggtgcc
accagcattgccaggcgagcaaaccgcatcctgctggtcgcaaagcgggaggtggaaaat
tccgaagaccccaaatttcgggaggctgttaaagcagcctctgatgagctgagcaaaact
atatcacccatggtaatggatgctaaagctgtggcaggcaacatttctgatcctggtttg
cagaagagtttcttggattctggatacaaaattctgggagctgtggccaaagtcagagaa
gccttccagcctcaggaaccagattttcctcctcctcctcctgaccttgagcaccttcat
ctgactgacgagcttgctcctccaaaaccaccactgccagagggggaggtccccccaccc
agaccaccaccacctgaagaaaaggatgaagagttcccagagcaaaaggcaggagaagca
atcaatcagcccatgatgatggctgcaaggcagttgcatgatgaagcccggaaatggtct
agcaagggcaacgacatcattgcggcggcgaagcgcatggcgctgctcatggctgagatg
tcgcgcctggtgcgaggtggcagcggcaacaagcgtgccctcatccagtgcgccaaggac
atcgccaaggcctccgacgaggtcacccggctcgccaaggaggtggccaagcagtgcacg
gacaagcgcatcagaaccaacctcctgcaggtctgtgagcgaatcccaaccatcagtaca
cagctgaaaattctctccaccgtcaaagctaccatgctgggcagaactaatatcagtgat
gaagagtcagaacaggcaactgagatgttggttcataatgcccagaatctcatgcagtct
gtgaaggaaactgtgagagaagctgaagcagcatccattaagataagaacagatgctgga
ttcactcttcgctgggtcagaaagaccccatggtatcagtaa
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