Geospiza fortis (medium ground-finch): 102037607
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Entry
102037607 CDS
T03755
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gfr00535
]
102037607
04091 Lectins [BR:
gfr04091
]
102037607
Proteoglycans [BR:
gfr00535
]
Cell surface proteoglycans
Others
102037607
Lectins [BR:
gfr04091
]
C-Type lectins
Others
102037607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
TMEM52
Motif
Other DBs
NCBI-GeneID:
102037607
NCBI-ProteinID:
XP_014162881
UniProt:
A0A6I9ZA05
LinkDB
All DBs
Position
Un
AA seq
2430 aa
AA seq
DB search
MWAGPTRSTLYPHQRDSRSHPKHALTHSCEGRSRLWESTAPSPVPGRCSWSWGGPAQGLR
LSFYGGSFVEVNMAEASPQTSLQLQFRTSQPQGLLLLAAGKTDYCLMELRSGYVQLRINF
GMGERVLHSQQRSQLNDLAWHLVELHHEHDNVTLVIDKHDRTSAKMPGILYELNIDFGFY
IGGTGKLHVPYLFGALPSFRGCIDGVSFNQLDILMPLRPSPGFKNIHEVSVGCSDEFFAG
EEEPISFFSSRSYISFPSWSVDSEGIFEYALQTSAACGLLLYQPGQAGDFIAMEMEDGLI
KAYVGKHESRTHLSSHRSVNDSRWHYIKLKFTAEYLQLTLDEETVKKSLPPQGKLPLLKG
SFFVGGVDDSIRSEVMKLISVSRKYARGGSFKGCLRNLKANSEKKSLKNVLVTKDISAGC
ELPSSFKANLSLETAEKNPPVKAAPVFAISHESSISLGKEDKSHLLVLSNLIVLEGEQAS
LESKHIKVNLDFQKLGINQSQILFDVKKPPSHGHLKLNVEPLQEVNTFTMQDVWQGKILY
VHDGSEDTYDYFNFSISASSEKIVPPYLQGNEQHMFSITVTPVNDAPEIILPEGNLLLLL
ENSKKRLTNDLIKVLDEDTDSVGLRLSVLGNLNADAGFLENSRHPGKAITTFSNEDLDNG
TVYFVHTGVRNSRIVLRASDGEKVSNTVVLRVMAVPLDYRVVNNSGINLLQGVTALIRPR
HLAVETNAVLQELEIRYEITEPPHFGQVQRQHSGGVWKQVNSFSQRSLQRSRVRYCSTFK
DIQLENITDQFKFKVSIGNRISDEHTFPIRVKWLRYNLLKHAPLEIEKPKKKYLNSDNLF
AVIADLEIPEDELRFKLLSLPKNGQIVLNDQALKEGSVFSQKDITDQKVAYELISQYHEG
YDSFRFLISTKYLDSNFYDFEVYIKSDLRNLILTNNGLNVIEGEGELITSTKLFVQTPDN
KTFQYEVIQFPKHGKLKYTNFSGSFENNDNLTTFTNKDITDKCLMYVHDDSETMFDELLV
RAYSKELGKGANFDPEVKPLSVEIRFHISVQLKNDEKPVRVVDKIFDIVRNGQRLLTLAD
LCYHDPDSDFDDGQLLYTRRGISNGDLVLTNDTLHRLYQFKQVDLEQKQVLFIHHGADFG
RFVLFVTDGKHYTSLLLEVNATDPYVKLVNNTGLLVQKGKEETVSTAILSAATNQDIRND
HELTYKILSFPKYGRICVNNVLKDSFTQLDLIKGHVSYRHDDSNNLIDTFNFTVHAGDVR
LDAGLQVRVYLESHQQPPRIVNKNNLLVEEGKPVKISKGKLQVVHENSPPSEIVFTVRQL
PIHGYIRKFSSEESYLSSNQKPALSFTQQDVDEGKVQYVQTVSDQLHDHFFLDVTNGVRT
VSGIEISVDIIPRMIPLEVQNFTVFEGGSKALLEDYLKISSRHFAGLSCEFILTEQPKHG
YVENSRVPGIKLATFTRKQVEQELIYYVHDDSEEPMDSFTVIVNNTELWKQSLPRTVFVT
VTAVNDEAPVVKVNKILQVWVGSVTEITIDDLCAEDKDSSPSELVYSITPPTNGHLALKS
SPNKSILTFTQAHIIKGQLVFVHNRAVSGGFNFQVTDGLNFAPRQIFSIRAQMLVISLEV
NKGLGVFPGSRKPISQHDLKAITNDVTSAGNRTITFVIVTSPKLGRLMRVDSDDTTQEIF
SFTQSMVDEGVIMYEHLHAESADWSAEDFFTFTVSSPPSALDIQMFHIVISYEIDRHDQN
SHLLANTGAVVQEGGRVLINKTNLDASNLLIKLPDVQRSAYEVWYQVVSLPQHGMMVVGE
RNVTKEKPNFSQYVLDKFGIMYIHDNSESLYDNFTFAVWLNLKSKPPTKPHSEVLEEMFN
ITVFPVNDQSPELKTKRLHLKVLQGDMSMLGAENLKVEDLDNAPAELKYTIVSNPNNGYL
AMKSNLNVSIKDFTQADVDSGKVWFVQDGSSSSGVFYFSVTDGKHRPLYKLFNLEVVPIA
LVLVNLTNVVLPQGQTSVTITDVQLSAVTNGKSTTIMYEITQPLKYGHLMIGNEQVTKFE
QADLYSGRLSYHLTNLTASSDVLEFMLFTAEGNLTGQVLNITVKPLVQIVSDLQISNQAA
YKFGSSDLDASELANLTNSNPRFEVIVPPLHGRIVKKRFVNDAVFEDIQMFTQADIDSGV
LLLDIDTNMTGIDLLNDSFTFILKADAVQPAVGCFQYSIVPHSPPLVQGFTTEVLFATSM
TTFKAHSASKDEALVSSQNEEPAIAPQKTEPTMWPGQNHWGNLHEESPLLNQAVGTSASM
ELKITNQVNARSPREQAGESSPWYIIIPLVLVSVLLIIAVTCVCISLMCQKKEKTKPLVK
SQTNAILSSADRCLERSLTVPSVTVTPLLKGAERTTASTFVAVKHEQLLPTVASPTSERY
LKNSFLNLDPEMIQYCRKTNPTLKHNQYWV
NT seq
7293 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcaggtcccacccgaagcacgctgtacccacatcagcgggacagcaggtcccac
ccgaagcacgcactaacccacagctgtgaagggcgctcccggctatgggaaagcactgcc
ccatctcccgtcccaggccggtgctcctggagctggggcggaccggcgcaggggctgcgc
ttatcattttatggtggtagctttgtggaggtgaacatggcagaagcatcccctcagaca
tccttacagttgcagtttcgaacaagccagccacagggactgcttcttcttgcagctggg
aagactgattattgtttaatggaactgcgctcaggatatgtacagttgagaattaacttt
ggtatgggagaacgagtactgcattctcagcaaagatctcagctgaatgatttggcttgg
cacctggttgaactgcatcatgaacatgataatgtcacattggtaattgataaacatgat
agaactagtgcaaaaatgcctggaattctttacgaattaaacattgattttggattctac
ataggtggtactggtaaacttcatgttccctacctttttggagcactacccagtttccga
ggatgtattgatggtgtgtcattcaatcagttagacattctgatgcctctgagaccttct
cctggcttcaaaaacatccatgaagtttcagtggggtgcagtgatgaattctttgcaggt
gaagaagaacccattagtttcttcagttccaggtcctatatttctttcccatcatggagt
gtggacagcgagggaatcttcgagtatgctttacaaacctcagctgcatgtggcttgctg
ctttaccagcctgggcaagcaggagatttcattgcgatggaaatggaagatggtttaatt
aaagcttatgttggaaaacatgaaagtagaacccatctttcttctcataggtcagtcaat
gatagtcgttggcactacatcaaactgaaatttactgcagaatatttgcagctaacattg
gatgaggaaactgtgaaaaagtcattacctccccagggtaagttgcctcttctgaaggga
tccttctttgtaggtggtgtagatgacagcatacgatcagaagtgatgaagttaatctca
gtatctaggaagtacgccagaggaggatccttcaaaggctgcttaaggaacctgaaagcc
aactcagaaaagaaatcactgaagaatgttctagtaactaaggacatttcagctggatgt
gaactgccaagttcttttaaagcaaatctttctttagagacagctgaaaaaaaccctcct
gtgaaagcagctcctgtatttgccatttcccatgaaagctcaatttctctgggcaaggaa
gacaaaagccaccttttagttctgagtaacttgattgtgctagagggtgaacaggcttca
cttgaatctaagcatattaaagttaacttagactttcagaaattaggaattaatcagtca
caaattctttttgatgtaaagaaaccaccctctcatggacacttgaaactgaatgttgaa
ccattgcaggaggtaaatacatttactatgcaggatgtatggcaagggaagattctgtat
gtccatgatggctctgaggacacttacgattattttaatttctccatttctgccagcagt
gagaagattgtgcctccatatttgcaaggaaatgagcagcatatgtttagcattactgtt
actccggtaaatgatgcacctgagatcatacttcctgagggaaacttgcttcttctctta
gagaactcaaagaagcgtttgactaatgacctgataaaggttctagatgaagatacagat
tctgtgggcctcagactttcagtgcttggaaatctgaatgcagatgcaggatttttagaa
aattcaaggcatcctggaaaagctatcactactttttctaatgaggatttagacaacggc
actgtttactttgtccacacaggtgtcaggaactcaaggattgttctcagggcaagtgat
ggtgagaaggtgagcaacactgttgtgttacgtgtcatggcagttcctttggattacaga
gttgtcaacaactcaggaataaatctcctccaaggtgttacagctcttataagacctagg
catctggcagttgaaacaaatgctgtcctccaggaactggagatacggtatgagatcaca
gagccacctcactttggtcaggtccaaaggcagcattcagggggggtatggaagcaagtc
aactctttttctcagcggtctcttcagcgcagccgggtgagatactgtagcacttttaaa
gacattcagctggaaaacattaccgaccaatttaagttcaaagttagcataggaaacaga
ataagtgatgagcacacatttccaatcagagtgaaatggttaaggtacaatctattgaaa
catgcccctctagaaattgaaaaaccaaaaaagaagtacttgaattctgataatctgttt
gctgtgattgcagatctagaaatacctgaagatgagcttcgtttcaaacttctgtcccta
ccaaagaatggacagatagtgcttaatgaccaggctttgaaagaaggttcagtctttagc
caaaaagatattactgatcaaaaagtggcatatgaattaatcagccagtaccatgaaggc
tatgattcatttagatttctcatttctacaaagtatctggattcaaatttctatgacttt
gaagtctacatcaaatcagatttgagaaaccttattttgactaacaacggccttaatgtt
attgaaggggaaggagaattaataacaagcacaaaactatttgtgcaaacaccagataat
aaaactttccaatatgaagttatacagtttcctaagcatgggaaattaaaatatactaat
ttttctggttcattcgagaataatgacaatcttacaactttcactaataaagatataact
gataagtgccttatgtatgtgcatgatgattctgagacgatgtttgatgaacttcttgtc
cgagcttacagcaaagagttgggaaagggggcaaactttgatccagaagtaaaacctttg
tcagtagaaatcagattccatatttctgtccagctgaagaatgatgagaagccagttcgt
gtagttgataagatatttgacatagtgagaaacggacagcgattattaactttggcagat
ctttgctatcatgatcctgattctgattttgatgatggacagttgctatatactaggcgt
ggtatttccaatggggacttggtgctaacaaatgatactttgcatagactctaccaattc
aaacaagtggacctggagcaaaagcaagtcctgttcatacaccatggtgcagattttggg
cgttttgtgctttttgtgacagatggcaagcactatacttctttgcttctggaagtgaat
gccaccgatccttatgttaagttggtaaataatacaggattgttggttcaaaaagggaaa
gaagaaactgtttcaacagctatcctcagtgctgctacaaaccaagacataagaaatgat
catgagcttacatacaagatactctctttcccaaaatatggaagaatatgtgtgaataat
gtattaaaggattcgtttactcagcttgatctgataaagggacatgtgagctacagacat
gatgacagcaacaaccttattgacacatttaactttacagtccatgctggagatgtccgt
ctggatgctggactacaggttcgtgtgtacttggaaagtcatcagcagccaccaaggatt
gtgaacaaaaacaatctcttggttgaagaaggaaaaccagttaaaatcagtaaaggaaaa
ctgcaagttgttcatgaaaatagtcctccatctgagattgtgttcacagtaagacagctt
cccatacatggatacattcggaagttttcctcggaagaaagttatctcagttctaaccaa
aagccagctttgagcttcacacagcaagatgtcgacgagggcaaagttcagtatgtgcag
acagtttctgaccaactacatgaccatttttttctggatgtgaccaatggtgtcagaaca
gtgagtggaatagagatctctgtagacatcatccccagaatgattccactggaagtacag
aactttacagtatttgaagggggctcaaaagccctactggaagactatctaaaaatttct
agtagacactttgcaggactcagctgtgaattcattttaactgagcagccaaaacatggg
tatgttgaaaactctcgtgttcctggaataaagttagccacatttaccagaaaacaggtg
gaacaagaattaatctactatgttcatgatgacagtgaagaaccgatggacagttttact
gttatagtaaataacacagagttgtggaaacagagtttaccccgaactgtgtttgtaact
gttactgcagtaaatgatgaagctcctgttgtaaaagtaaacaaaattcttcaggtctgg
gtgggttcagtcacagaaataactattgatgacctctgtgcagaagacaaggactcctca
ccatcagaactggtgtattctattactccacctaccaatggacacttggctctgaagtct
tctccaaacaagagcatccttacttttacccaggctcacataattaaagggcagctggta
tttgtacacaatagagcagtgtctggaggcttcaactttcaggtgacagatggtttgaac
tttgcaccccgacagatttttagcatcagagctcagatgctggtcattagccttgaagtg
aacaaagggctcggagtctttccaggttccaggaaacctatttcacaacatgatctgaaa
gctataaccaatgatgtgaccagtgcaggaaacagaactataacttttgtgattgtaact
tccccgaaacttggaaggctgatgagagtagattctgatgataccactcaggaaatcttc
agttttacgcagtctatggttgatgaaggtgtgatcatgtatgaacacttacatgctgag
tcagctgactggagtgcagaagatttctttacatttactgtatcctctccaccatcagct
ctggatatccagatgttccacattgtcatttcatatgaaattgacaggcatgatcagaat
agtcatcttctagcaaatacaggtgccgtagtccaggaaggaggtagagtattaatcaac
aaaacaaatctagatgcttcaaacctattgattaagctacctgatgtacagcgctctgca
tatgaagtctggtatcaggttgtgtctttaccccaacatggcatgatggttgttggagaa
cgaaacgttaccaaagaaaagcctaacttctcccagtatgtactggacaaatttggaatt
atgtacatacatgataattctgaatctctatatgacaatttcacttttgctgtttggttg
aacctgaagagcaagcctcctacaaagccccatagtgaagttttagaggagatgtttaat
atcactgttttcccagtgaatgaccagtctccagaactgaagactaaaagactgcacttg
aaagtcctgcagggagatatgtcaatgctgggggcagagaatctgaaagttgaagactta
gataatgctccagctgagctgaaatacaccattgttagcaaccccaataatggttactta
gcaatgaaaagcaatctcaatgtctctataaaagatttcacacaagctgatgttgacagt
ggtaaagtgtggtttgtacaggatggaagttcatcttctggggtgttttatttcagtgtg
actgatggtaaacatcgccctttatacaaactgttcaatcttgaagtcgtaccaattgct
cttgtcctcgtcaaccttaccaatgttgtgctgccacagggccagacatctgtcactatt
actgacgttcagctttcagccgtcacaaatggaaaaagcactactattatgtatgaaata
actcagccactcaagtatgggcacctcatgattggaaatgagcaggttactaaatttgag
caggcagatttgtactcgggaaggctctcttaccacctgacaaatcttactgcttccagt
gatgtactggagtttatgctttttactgcagaaggcaatctaacaggacaagtgctgaac
atcacagtgaagcctttagtacaaattgtatctgacctgcagatttcaaatcaagcagct
tataaatttggaagcagtgacctggatgcttctgagctagccaatttgacaaacagcaat
cctagatttgaagtgatagtgccccccttgcacgggaggattgttaagaaaaggtttgtg
aatgatgcagtatttgaagatattcagatgttcacccaggctgacattgatagtggtgtt
ttgcttctagatatagacacaaatatgacgggcattgatctgttgaatgactcatttaca
tttatactcaaggcagatgctgtgcagcctgctgttggctgttttcagtattccattgtg
ccacacagtcctccacttgtgcagggttttacaacagaagtgctttttgcaaccagcatg
accactttcaaggctcactctgcctcaaaggatgaggcactagtctcctcacagaacgaa
gagcctgcaatagcaccacagaagactgagccaaccatgtggccagggcagaatcactgg
ggaaacctacatgaggaaagtcccttgctaaatcaggccgtgggaacaagtgcatccatg
gagttgaagattacaaaccaggttaatgccaggagtcccagagagcaggcaggtgaaagc
agcccttggtacattattattcccctggtcctagtgtctgtgctactcattattgctgtt
acttgtgtgtgcatttcgttaatgtgtcagaagaaagagaagacaaaacctttagtcaaa
agtcaaacaaatgcaatcctcagtagtgcagatcgatgtctggaacggagtttgactgtg
ccctctgtcacagtgactcctctcctgaagggggctgagaggactacagcctctacattt
gtggcagtaaaacatgagcagctgcttcctacagtggcttctccaacttcagaaaggtat
ctgaaaaacagttttttaaatcttgatcctgaaatgatccagtattgtcgaaaaacaaac
ccaactttgaagcacaatcagtactgggtataa
DBGET
integrated database retrieval system
