Geospiza fortis (medium ground-finch): 102037657
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Entry
102037657 CDS
T03755
Symbol
STXBP5L
Name
(RefSeq) syntaxin binding protein 5 like
KO
K08518
syntaxin-binding protein 5
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102037657 (STXBP5L)
Membrane trafficking [BR:
gfr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102037657 (STXBP5L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
102037657 (STXBP5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Synaptobrevin
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
102037657
NCBI-ProteinID:
XP_005420635
UniProt:
A0A6I9HHP1
LinkDB
All DBs
Position
Un
AA seq
1186 aa
AA seq
DB search
MKKFNFRKVLDGLTAASPVGSSGGGSGSGAGGSVHPGGTAGAAGTPREEIQETLTSDYFQ
ICKTVRHGFPYLPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFL
INEGALVSACADDALHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTERGNTH
IVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTIVFWDLRS
KRADLRAYYDEAIHSVAWHHEGKQFMCSHSDGSLTLWNLKSPNRPFQTTIPHGKVQRDGK
KPESCKPILKVEYKTCKNSEPFVVFSGGLSYDKPCRRPSLTIMHGKAITVLEMDHPIVDF
LTLCETPYPNEFQEPYAVAVLLEKDLIVVDLTQTNFPIFENPYPIDIHESPVTCTEYFAD
CPPDLIPVLYSVGAKHKKQGYSNKEWPISGGAWNLGAQTYPEIIITGHADGSVKFWDASA
ITLQMLYKLKTSKVFEKQKVGEGKATAEIVEEDPFAVQMMYWCPESRIFCVAGVSAYVIV
YRFSKHEVNTEIASLEVRLQCEVEDIITPEPETNPPFPDASSQLPPVKSLSGSTNTVAGE
GTMKDSIPCLSVKARPVRMPPGYQADLVIQLVWVDGEPPQQITSLAVNSAYGLVAFGNCN
GLAVVDFMQKTVLLSMGTLDLYGSSDPYQRQPRSPRKSRQFAADNFCMRGLSNFYPDLTK
RIRTSYQSLTELSDSPVSLELERCKSPTSDHVNGHCTSPTSQSCSSGKRLSSADVSRANR
RGPGRPPFRKAQSAACMEISLPVTTEENRENSFSRSRSSSVSSIDRDSKEAITALFFMES
FARKNDSAVSSCLWVGTGLGMVIILSLNLPASDDLRQSEPVMVSPSGTVLTLKGAVLTFA
CLDCMGTLTHQPYEVWRDPHSADDGDKTRKRKLVMHSPSSSQDMGDHQFAVICSEKQAKV
FSLPSQTCLYVHNITETSFLLRADVVTLCNSVCLACFCANGHIMTLSLPSLRPLLDMNYL
PVTDMRIARTFCFTNEGQALYLSSPTEIQRLTYSQEMCDNLQDMLGDLFTPVETPEAQNR
GFLKGLFGGSGQAFDREELFGEATAGKASRSLAQHIPGSGGIEGVRGAAGGVIGDLTRAR
IALDERGQKLGELDERTASMMASAEAFSKHAHEVMLKYKDKKWYQF
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaattttcgcaaagttttggatggtttaactgccgcatcccctgttgga
agcagtggcggtggcagtggaagtggggctggtggctccgtgcacccaggagggactgcg
ggagctgcagggacacccagagaggagatccaggagacgctcacttcagattattttcag
atctgtaagacggttcgccatggctttccttacctacccactgccttagcgtttgaccca
gttcagaaaattctggccattggaacaagaacaggagccatacgaatattgggcaggcct
ggtgttgattgctactgccaacatgaaagtggtgctgcagttctgcagctccagttccta
atcaatgagggtgctttggtcagtgcatgtgcagatgatgcacttcatttgtggaacctc
cggcagaaacgaccagctattctacattctctgaaattcaacagagaaaggattacttac
tgccatctacctttccagagtaaatggctttatgttggaacagagagaggaaatacacac
attgtaaatattgagtccttcattctttctggatatgttatcatgtggaacaaggcaata
gaactatccaccaagactcaccctggcccagttgtacatttaagcgacagcccaagagac
gagggaaaactgttgataggctatgaaaatgggaccatcgtgttctgggacttaagatct
aaaagagccgatctgagagcttattacgatgaggctattcattctgttgcttggcatcat
gaagggaagcagttcatgtgtagtcactctgatggcagcttgaccctgtggaatctgaaa
agccctaacagaccattccagaccacaattccacacggaaaagttcaaagagatgggaaa
aaacctgagtcttgtaaaccaattcttaaagtagaatacaagacctgtaaaaacagtgaa
ccatttgtggtattttctggtggattgtcatatgataagccttgtcgaagaccaagctta
acaatcatgcatgggaaagcaattacagttcttgaaatggatcatcctatagttgatttt
ttaactctttgtgaaacgccttatccaaatgaatttcaagaaccttatgctgtagctgtt
cttttggaaaaagatctcattgtcgttgacctgacacaaaccaattttccaatctttgaa
aatccatatcctattgacattcatgagtcacctgttacctgcacagaatattttgcggac
tgtcctccagatttgatccctgtactctattctgtaggagcaaaacataaaaagcaagga
tacagcaataaggagtggcctatcagtggtggagcatggaaccttggagctcagacatat
cctgaaatcattattacaggccatgcagatggatcagtaaaattttgggatgcttctgcc
attactctacagatgttgtacaaactaaaaacatcaaaggtctttgaaaaacagaaagtg
ggagaaggaaaagcaacagctgaaattgtggaagaagatccttttgctgttcagatgatg
tactggtgccctgaaagccgaattttctgtgtggcaggagtttctgcctatgtgattgtt
tacaggttcagcaaacatgaagtaaatactgaaattgcatcattagaggtacgacttcag
tgcgaagtagaagacatcattactcctgaaccagaaacaaatcctccattcccagatgcc
tcctcccagctcccgcctgtaaagagcctttcaggcagtaccaacactgtagcaggtgaa
ggaacaatgaaggacagtatcccatgtcttagcgttaaggctcgacctgtgcggatgcct
cctggctaccaggcagatctggttatccagttggtgtgggtggatggtgagcctccacaa
cagattaccagtcttgctgtaaactctgcttatggactagtggcttttgggaactgcaat
ggtttggcagttgtggatttcatgcagaagacagtcctgctgagcatgggcaccctcgac
ctctatggctccagtgatccgtaccagcggcagccccgctcaccccgcaagagcaggcag
tttgctgcagacaacttttgcatgcgtggcctgtctaacttttatccagatttaacgaaa
cggatccgtacttcctatcagagcctgactgaactcagtgacagtccagtttccctggag
cttgagcgttgcaagtctcccacttcagatcacgtgaatggtcactgtaccagcccaacc
tcccagagctgcagttcaggcaaacgcctttccagtgcagatgtgtcgagagcaaaccgc
cgagggcctggcaggccccccttcaggaaagcccagtctgcagcctgcatggagatttct
ctcccagtcaccacagaagaaaatagggaaaactccttcagccgttcccgaagctccagc
gtgtccagcatcgacagggactccaaggaggcaatcacagctttgttcttcatggagtcc
tttgcccgaaagaacgactctgctgtttcctcctgcctctgggttgggacaggccttgga
atggtcataatcctgtccctcaatctgcctgcaagtgacgacttacggcagtcagagcca
gtcatggtgtctccaagtggcaccgtgctgaccctgaagggagccgtgctgaccttcgcg
tgcttggactgcatggggacactgacacaccagccctatgaagtatggagggatccacac
agtgctgatgacggtgacaaaacaaggaaaaggaaacttgtcatgcattccccttcctcc
tcccaggatatgggtgatcatcaatttgcagtcatttgttcagaaaaacaagccaaagtc
ttctcattgccttcccaaacatgtctttatgtccacaacatcaccgaaacgtccttttta
ttgcgagcagatgtggtcaccctctgtaacagcgtctgtctggcgtgcttttgtgctaat
gggcacatcatgacactgagcttgcccagcctccgcccgctgctggacatgaactatttg
cctgtcacagacatgaggatagcacggaccttttgtttcactaatgaagggcaggctttg
tacctgagctctcccacagagatccagcgcctgacctacagccaggagatgtgtgacaac
ctgcaggacatgcttggggacctgtttactcctgtggaaacaccagaagcccaaaacaga
ggcttcctcaaaggactttttggaggaagcggacaagcttttgacagagaggagcttttc
ggcgaggccacagcaggaaaagcgtcccgcagcctggcccagcacatccctgggtcgggc
gggatcgaaggcgtgcgaggagcggcgggcggggtcattggggacctgacccgagcgcgc
atcgccctggacgagaggggacagaagctgggcgagctggatgaaaggactgccagcatg
atggccagtgcagaggccttttccaaacatgcacacgaggtgatgctcaaatacaaggac
aaaaagtggtaccagttttag
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