KEGG   Geospiza fortis (medium ground-finch): 102037845
Entry
102037845         CDS       T03755                                 
Symbol
PADI1, PADI3
Name
(RefSeq) protein-arginine deiminase type-4
  KO
K01481  protein-arginine deiminase [EC:3.5.3.15]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    102037845 (PADI1)
Enzymes [BR:gfr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.3  In linear amidines
    3.5.3.15  protein-arginine deiminase
     102037845 (PADI1)
SSDB
Motif
Pfam: PAD PAD_M PAD_N TRAF2_zf
Other DBs
NCBI-GeneID: 102037845
NCBI-ProteinID: XP_014165486
LinkDB
Position
Un
AA seq 1211 aa
MDICGTASSKGDPSRGISAWKPPFPRSSRPKRDTEEVEFPREASGCWLSTPRGAVSFDVH
ATPAVTVHMIHSPATKPSLDARWPLDPDIEVVVTIDATSRTVDDNQVKISYYDREGRELA
VAWLYLTCVEVSLDVDWSRSGRVKSKGKDKDKWTWGPDGQGAVLLVNCDRDSPGAGGTDS
GQADIRTPADLQDMSVMLLRTEGPSAIFAEYPVVLHVPESDADKVRVFHAVRGDAYPLYK
PVLGPDKLSYVLDQAGHGDSTFYVEGLAFPDRGFSGLVSFSASLLEVPHKDSPGTPIFTD
TVVFRVAPWIMTPNTQQPLEVFVCRYEGCPWTGVFLSPPRAFLLLLLLLLLFLLLVSFPQ
DELEFGYVEAPHKTFPVVFDSPRNRGLKDFAFKKILGPDFGYVTREPPGKKSLALTPKMA
GRRMCRAVRDFLYAQTVQAPLEVYSEWLSVGHVDEFLTFVPALDRKGFRLLLASPNACYK
LFKEKQQQGHGEATQFIGSSGARGWDVEGWDGSSGSFPQRCIDWNRDLLKQELGLSEQDR
VDIPQLFILTNSRADALFPDMQPGFINPPRPPGAAPEGAMAQQRRVQLSTQRPGSAVCVL
GTELALDVCGNADFGEIRAPIGNADFGEIRVPVGNADFGEIRALIRNDDFGEIRARTTPG
QRRHRSHRGPAPSPLPSGEVSLDADVTRSGAVSRTLLDKASWTWGPDGHGAVLLVNCDRD
DPGAEGLDNEDSAVRSYNDLQDMAQLVLRARGPRATFAGHRLLRHSVTEDNVELEMFKAV
LGGSKLSYTVRPSRHQHESVFYVEGLAFPDVAFSGLVSLHVTLLESPGKGLLESPIFTDS
VVFRVAPWIMTPNTAPPLEVFVCSVDKNGEFGAAVGALAERAQVPLTVCPAPQNQQDRWI
QDEVEFGYIQAPHKTLPVVFDSPRDRGLKDFPVRSILGPDFGYVARQAPEGTSSLDSFGN
LEVSPPVTVQGKEYPLGRILIGSSFPREGGRRMAKAVRDFLVAQKVQAPVELFSDWLSVG
HVDEFLSFVPAPDRKGFRLLLASPSACYQLLREKQEEGFGEAAMFQGRAGRPTINAILAD
EELRKFNDYAQSCISWNRDILKRSLGLAEPDILDIPQLFQSNADSEAEAFFPDMVNMLVL
GRHLGIPKPFGPVVGGRCCLEQRVRELLEPLGLSCTFIDDFFSYHVLLGEVHCGTNVRRK
PFAFKWWHVVP
NT seq 3636 nt   +upstreamnt  +downstreamnt
atggatatctgtggtacagcttccagcaaaggggatccttcccgtgggatctcggcctgg
aaacctccgttcccccggagctcgaggcccaagcgagacacagaggaggttgagtttcct
cgggaagcctctggttgttggctgtccaccccgagaggtgccgtgtcctttgacgtgcac
gccacgccggcggtgacggtgcacatgatccacagccccgccacaaagcccagcctggac
gcccggtggcccctggatcccgacatcgaggtggtggtgaccatcgatgccaccagcagg
actgtcgatgacaaccaggtgaagatctcctactacgaccgcgagggccgtgagctggcg
gtggcctggctgtacctcacctgtgtcgaggtgtccctggacgtggactggagccggagt
ggccgcgtgaagagcaagggcaaggacaaggacaagtggacgtggggcccggatggacaa
ggggccgtgctcttggtcaactgtgaccgggacagccccggcgcggggggcacggacagc
ggccaggcagacatacggacgccggcagacctccaggacatgtcggtgatgctgctgcgg
accgagggccccagcgccatcttcgccgagtacccggtggtgctgcacgtccccgagagc
gacgcggacaaagtgcgggtgttccatgccgtccgtggtgatgcctacccgctctacaag
cccgtgctgggcccagacaagctctcctacgtgctggaccaagctggccacggggacagc
accttctacgtggaggggctggcgttccccgacaggggcttctccggcctcgtgtccttc
agcgccagcctgctggaggtgccccacaaggactcgccgggcacgccgatcttcacggac
accgtggtgttccgcgtggcgccctggatcatgacacccaacacccagcagcccctggag
gtgtttgtctgcaggtacgaggggtgtccatggacaggggtattcctatcacccccaaga
gccttcctcctcctcctcctcctcctcctcctcttcctcctcctcgtctcattcccacag
gatgagctggagtttggctacgtggaggctccacacaaaaccttccccgtggtcttcgac
tctcccaggaacagaggcctgaaggatttcgcttttaagaagatcctgggcccggatttt
ggctacgtgacccgggagccgcccgggaagaaaagcttggccctcacaccgaagatggcc
gggcgcaggatgtgccgcgccgtgcgggatttcctctacgcgcagacggtgcaggcgccg
ctcgaggtctactcggagtggctcagcgtgggccacgtggatgagttcctcaccttcgtc
cctgccctggacaggaagggattccggctgctcctggccagtcccaacgcctgctacaag
ctcttcaaggagaagcagcagcagggccacggggaggccacgcagttcatcggatccagc
ggggcccgtgggtgggatgtggagggctgggatggcagttctggttccttcccgcagcgc
tgcatcgactggaaccgcgacctgctgaagcaggagctggggctgagtgagcaggacaga
gtggacatcccacagctcttcatcctgaccaactcccgtgccgacgcgctcttcccagac
atgcagcccggctttataaaccccccgcggccgccgggcgcggcacccgagggtgcgatg
gcgcagcagcgccgtgtccagctgtccacgcagcgccccggcagcgccgtgtgcgtgctg
ggcaccgagctggccctggacgtgtgcggaaatgccgattttggggagatccgcgcccca
attggaaatgccgattttggggagatccgtgtcccagtcggaaatgccgattttggggag
atccgtgccctaatcagaaatgacgattttggggagatccgtgcccgaaccacccccggg
cagcgccggcatcgatcgcatcgcggcccggccccatccccgctgccctcgggagaggtg
tcgctggacgctgatgtcacccgcagcggggccgtgagccggacactgctggacaaggcc
agctggacgtggggccccgatggccacggggccgtgctcctcgtcaactgcgaccgcgac
gaccccggcgccgagggcctggacaacgaggacagcgccgtgcgctcctacaacgacctg
caggacatggcgcagctggtgctgagggcgcgcgggccccgcgccaccttcgccgggcac
cgcctcctgcggcactctgttacagaagacaacgtggagctggagatgttcaaggccgtc
ctggggggctccaagctgtcctacaccgtgcggcccagccggcaccagcacgagagcgtc
ttctacgtggagggcctggccttccccgacgtggccttctcggggctcgtgtccctgcac
gtcaccctgctcgagagccccggaaagggcctcctggagtctccgatcttcacggactcc
gtggtgttccgcgtggctccctggatcatgacgcccaacacggcgccgccgctcgaggtc
tttgtctgcagcgtggacaagaacggggagtttggggcggccgtgggcgcgctggccgag
cgggcgcaggtgccgctgaccgtgtgcccagcgccgcagaaccagcaggaccgctggatc
caggatgaggtggagttcggctacatccaagccccccacaagaccctccccgtggtcttc
gactcgccccgggaccgcggcctgaaggattttcccgtcaggagcatcctgggccccgat
tttggctacgtggcccggcaggctccagagggcacttccagcctggattccttcgggaat
ttggaggtgagcccgcccgtgacggtgcagggcaaggagtaccccttggggcgcatcctg
atcggcagcagcttccccagggagggcggccgcaggatggccaaggccgtgcgggatttc
ctggtggcccagaaggtacaggcgcccgtggagctcttctcggactggctcagcgtcggg
cacgtggatgagttcctgagcttcgtccccgcgcccgaccggaagggattccggctgctc
ctggccagccccagcgcctgctaccagctcctgagggagaagcaggaggaggggttcggc
gaggccgcgatgttccagggtagggcaggacggccgaccataaacgcgatcctggctgac
gaggagctccgcaagttcaatgactacgcccagagctgcatcagctggaaccgggacatc
ctgaagcgctcgctgggcctggccgagccggacatcctggacatcccgcagctcttccag
agcaacgccgactcggaggccgaggccttcttcccggacatggtgaacatgctggtgctg
ggccggcacctgggcatccccaagcccttcgggcccgtggtgggcgggcgctgctgcctg
gagcagcgcgtgcgggagctgctggagccgctgggcctctcctgcaccttcatcgacgac
ttcttctcctaccacgtgctgctgggcgaggtgcactgcggcaccaacgtgcgccgcaag
cccttcgccttcaagtggtggcacgtggtgccctga

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