Geospiza fortis (medium ground-finch): 102038008
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Entry
102038008 CDS
T03755
Symbol
NUP155
Name
(RefSeq) nucleoporin 155
KO
K14312
nuclear pore complex protein Nup155
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102038008 (NUP155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102038008 (NUP155)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102038008 (NUP155)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
102038008
NCBI-ProteinID:
XP_014164563
LinkDB
All DBs
Position
Un
AA seq
1353 aa
AA seq
DB search
MSDMDYPLQGPGLLSIPNLPEITSVRRVPLPPELVEQFGHMQCNCMMGVFPEISRAWLTI
DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLH
CSNIQSGTGSLNDSMSGGMQLLPDPLYSLPTDNTYILAITSTDNGRIFLAGKDGCLYEVA
YQAEAGWFSQRCRKINHSKSALSFLIPSLLQFTFSEDDPVVQIAIDNSRNILYTRSEKGV
LQVYDLGQDGQGMTRVTSLSQNAIVSAAGSIARTIDRSVFKPIIQIAVIENSESIDCQLL
AITHAGVRLYFSTSQFKHPTARPSMLTLVHVRLPPGFSASSNVEKPAKVHRALYSKGVLL
MAASENEDNDILWCVNHDSFPFQKPMMETQMTTRVDGHSWALSAIDEFKVQKIVTPLNKD
IIPITDSPVVVQQHMLPPKKFVLLSAQGSVMFHKLRPVDQLRHLLVSNTGGDGEEIERFF
KLHQEDQACATCLILACSNAACDREVSAWATRAFFRYGGEAQMRFPSALPPPSNVGPILG
SPVSAVTGPGGRWHYSSPTTFSVCSKGTPLTVDSPYSNPSILTSGQGIQPPAMSTPIFPP
GNSMSHPSTSISGMMGPEIVFSGRHNGICIYFARIIGNIWDGSIVVERVFKSGNREIVAI
ESSVPSRMLECVLQELKGLQEFLDRNSQFATVGALGNPSTPANLQQRLLGFMRPDGGSSQ
QVQQELQRKYHAEAQLTEKTSLQGIQQLVRKTCQALALWKLLCEHQFSVAVGELQKELQE
QLKVTAFKDLVIRDRELTGALIASLINCYIRDNAAVDGIIAHLRDICPLLYSTDDAVCSK
ANELLQRSRQAQSKMEKEKMLRESLKEYQKISNQVDLANVCAQYRQVRFYEGVVELSLTA
AEKKDPQGLGLHFYKNGEPEEDVVGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVP
KKPGPPMLSSDPNMLSNEEAGHHFEQMLKLVQRSTDELFSIALYNWLIQADLADKLLQVT
APFLEPYLVRMTKIDQNKVRYMDLLWRYFEKNRNFSNAARVLAKLADLHSTEISLQQRLE
YIARAILSAKSSTAISSLAADGEFLHELEEKMEVARIQLQIQETLQQQYSHHSSVQDAIS
QLDAELMDITKLYGEFADLFKLSECKLAIIHCAGHSDPILVQTLWQEVIEKELSDSVSLS
PADRMQALCLKLALLGKIYAGTPRYFPLDFLVQFLEQQVCTLNWDVGFVTYTMQEIGVPL
PRLLEVYDQLFKARDPYWSRMKKPLHLLECIHVLLSGYVQDPSRVPMRRRFTNVCLDAVS
CYLVELQSMSPTLMVQTTIGNFKSLQAKLERLH
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatggattatcccttacaaggaccaggtttgctgtcaatacccaatcttcca
gaaatcacctcagtccgccgagtcccacttccaccagagctagtggagcagtttggacat
atgcagtgcaattgtatgatgggagtatttccagagataagcagagcttggctgaccatt
gacagtgacatctttatgtggaactatgaggatggaggagatctggcttattttgatggc
ctcagtgaaactattcttgcagtgggccttgtaaagccaaaggcaggtatcttccagcct
catgtacgacacttacttgttctggctactcctgtggatattgtgattttagggcttcat
tgttctaatatacaatcaggtactggatcactcaatgacagcatgtctggaggaatgcag
ttgttaccagatcctctgtattcgctccctactgacaacacctacatcctggcaatcaca
tccactgataatggcaggatcttcctggcaggaaaagatggctgcttatatgaagtagca
taccaggctgaagcaggctggtttagccagcgctgtagaaaaattaatcattcaaagagt
gcgctgtcttttcttattccttcgttgctacagttcacattctcagaggatgatcctgtc
gttcaaattgccattgacaactctcgaaatatcttgtacacccgctcagaaaaaggagtc
ttgcaagtttatgatctggggcaagatggtcaaggaatgaccagagttacttctctttca
caaaatgctatagtttctgctgcagggagcattgccagaacaattgatcgttctgtattt
aagcctattattcaaatagcagtgattgaaaattctgaatccatagactgtcaactacta
gcaatcacgcatgcaggtgtccgactgtattttagtacatcacaatttaagcatccaaca
gctcgtccttccatgttaaccttggtccatgtccgtttgccacctggattttcagcttct
tcgaatgtagagaagcctgcaaaggttcacagagctctttatagcaaaggggtcctgctg
atggcagcttcagaaaatgaagataatgacatcctgtggtgtgtcaatcatgattctttc
ccttttcaaaaaccaatgatggaaacccagatgacgacccgtgttgatggacattcctgg
gctctttctgctattgatgaatttaaagttcagaagattgtaacaccactaaataaagac
attattcccataactgattcacctgttgttgtgcaacaacacatgctgccacctaagaag
tttgttctgctttcagcccaaggaagtgttatgtttcataaactcagacctgttgatcag
ctgcggcatctgcttgtcagcaatacaggtggagatggagaggagattgagagatttttc
aagttgcatcaggaggatcaggcctgtgccacttgccttattttggcctgttctaatgct
gcatgtgatagagaagtatctgcctgggctactcgagcattcttcaggtatggtggagaa
gcacaaatgagatttccatcagctctgcctcctcccagcaacgttggacctattttgggt
tctcccgtttctgcagtaacaggtccaggtggaagatggcactattcttctcctactact
ttctcggtttgctcaaagggtactcctttgactgttgatagtccatattctaatcctagc
attttgacatctggacaaggtatacaacctcctgctatgtcaactcccatttttcctcct
ggaaattccatgtctcaccctagtacatccattagcggaatgatgggtcctgagatagta
ttttctggaagacacaatggcatctgcatatactttgcccggattataggaaatatttgg
gatggcagtatagtcgtggagagagttttcaaaagtggcaatcgagaaattgttgcaata
gaaagcagtgttccatcccgtatgctggaatgtgtactacaagaactaaaaggtttacaa
gaatttttggatagaaattcacagtttgctacagtaggagcacttggaaatccaagcaca
ccagccaatctacagcagagactcctgggttttatgcggcctgatggtggaagttctcag
caagtccagcaagaactccaaaggaaatatcatgctgaggcacagctaactgagaagacc
tcacttcaaggcatccagcagcttgttcgcaaaacctgccaggcactggctttatggaag
ttgctatgtgagcaccagttcagtgttgctgtaggtgagcttcagaaggaacttcaagaa
cagctaaaggttactgcttttaaagacttggtgattagagatagagagttgactggagca
ctcattgcctctcttataaactgttacatcagagataatgcagctgtggatggaatcatt
gcccatttgagagatatctgccctcttctttacagcactgatgatgctgtgtgttcaaag
gcaaatgaacttcttcagcgatctcgacaagctcaaagcaaaatggaaaaagagaagatg
ctgagggagtcactgaaagagtaccagaagatcagcaatcaagtagaccttgctaatgtt
tgtgcacagtacagacaggtgcgtttctatgagggagtagtagagctctctcttacagca
gctgaaaagaaagatccccaaggtcttggccttcatttctataaaaatggagaaccagaa
gaagatgtggttggactccaagcttttcaagaaagattgaacagctacaagtgtatcact
gacacccttcaagagttagtgaatcaaagtaaagctgctcctcagtctcccagtgtaccc
aaaaagccaggtcctccaatgctgtcatctgatcccaatatgttaagcaatgaagaagct
ggacatcattttgaacaaatgctaaagctggttcagcgttcaacagatgagctcttcagt
attgcgctttacaattggttgatacaagctgacttggcggacaagctgttacaggttact
gccccgtttttggagccctacctggtgcggatgaccaagattgaccaaaacaaagtccgc
tatatggatttgctctggagatactttgaaaaaaacagaaattttagtaatgctgctaga
gtcttggctaagttggctgacctccatagcacagaaatttctcttcagcagcgtcttgaa
tacattgcacgtgccattttgagtgccaaaagttccactgccatatcctctttagctgca
gatggtgaattcctacatgaactagaagaaaaaatggaagttgcaaggatccagcttcaa
atacaagaaacattacagcagcagtattcccatcattcttcagtacaagatgcaatttcc
cagcttgatgctgagctgatggatataaccaagctgtatggagaatttgctgaccttttt
aagctctcggagtgtaagcttgcaattatacattgtgcaggtcattctgatcctatcttg
gtgcaaactctctggcaagaagtaattgaaaaagagttgagcgacagtgtatctctgagc
cccgctgacagaatgcaagcactttgtctgaagctggcattgcttggaaagatctatgct
ggcacacctcgctactttcctttagattttctagtgcagtttctagagcaacaagtctgc
actttgaactgggatgtaggttttgtaacatataccatgcaagaaattggagtgccattg
ccaaggctgcttgaagtgtatgaccagctgttcaaagcacgggatccatattggagtaga
atgaaaaagcctttgcacctcttggagtgtattcatgtattactgtcaggatatgtacag
gatccaagcagagtacctatgaggcgacgattcacaaatgtttgcttggatgctgttagt
tgctacctggttgaacttcagtctatgagccccacactaatggtgcagactactattggg
aattttaaatctctacaggccaagttagaacggcttcactga
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