Geospiza fortis (medium ground-finch): 102038226
Help
Entry
102038226 CDS
T03755
Symbol
XBP1
Name
(RefSeq) X-box binding protein 1
KO
K09027
X box-binding protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102038226 (XBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102038226 (XBP1)
04131 Membrane trafficking [BR:
gfr04131
]
102038226 (XBP1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
102038226 (XBP1)
Membrane trafficking [BR:
gfr04131
]
Autophagy
ER-phagy
ER stress-related proteins
102038226 (XBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
102038226
NCBI-ProteinID:
XP_014162655
LinkDB
All DBs
Position
Un
AA seq
358 aa
AA seq
DB search
MSFEVALYGTFYDSRALQQSYDSRAIRHLLRQSRFMAVLRQSRYTAPFYDSRVLRQLRFT
EALRQSRFTAGCATVALYGTFYNSHALQHLLWQSRFTVPFTTVALCGTFYDSVLYGRFYD
SRALRQLLRQLRFMADFTTVALYEVASSQFSPHEKECPNWESANTFPSAPPFSVPMAAEN
SSIDTELEQQVVELEEENQKLLRENQLLRERTCDLARENQELRCRLGLDALKTEEEGDEF
QVVKESQVDEIRLVTGSAESAALRLRVPLQQVQAQQSPFLIVSTWILMAVTLQTLSLMSY
WAFWTVWTQSCFSNMLIQSQRAWKSWMKRSLEKQIPYQPPSLPLWGPHQPSWKPLMNS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgaagtcgcgctttacggcaccttttacgacagtcgcgctttacagcagtct
tacgacagtcgcgctatacggcaccttttacgacagtcgcgctttatggcagtcttacga
cagtcgcgctatacggcacctttttacgacagtcgtgttttgcgacagttgcgctttacg
gaagctttacgacagtcgcgctttacggccggttgtgcgacagtcgcgctttacggcacc
ttttacaacagtcacgctttacaacaccttttatggcagtcgcgctttacggtgcctttt
acgacagtcgcgctttgcggcaccttttacgacagcgtgctttacggccgattttatgac
agtcgcgctttacgacagcttttacgacagttgcgctttatggccgattttacgacagtc
gcgctttacgaggtggcctcctctcagttctctccccatgagaaggagtgtccaaactgg
gaatcagcaaacactttcccctcagcccctcccttctcagtgcctatggctgctgagaac
tcctctattgatacagagctggagcagcaggtggtggagctggaggaggagaaccagaag
ctgctgcgggagaaccagctcttgcgggaaaggacgtgtgacctcgcgcgggagaaccag
gagctccgctgccgcctgggtttggatgctctgaagacggaggaggagggtgacgagttc
caggttgtgaaggaatcccaggtggatgaaatcagattggtgaccgggtccgctgagtcc
gcagcactcagactacgtgttcctctgcagcaggtgcaggcccagcagtcaccatttctg
atagtttccacatggattctgatggcagtgactcttcagactctgagtctgatgtcctat
tgggctttctggacagtctggacccagagttgtttctcaaatatgctgattcagagtcaa
cgtgcctggaaaagctggatgaagagatctctggagaaacaaattccataccagccgccc
tctctccctctttggggtccccatcagccaagctggaagccattaatgaactcataa
DBGET
integrated database retrieval system