Geospiza fortis (medium ground-finch): 102038231
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Entry
102038231 CDS
T03755
Symbol
USP24
Name
(RefSeq) ubiquitin specific peptidase 24
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102038231 (USP24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102038231 (USP24)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102038231 (USP24)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102038231 (USP24)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102038231 (USP24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
102038231
NCBI-ProteinID:
XP_014163296
LinkDB
All DBs
Position
Un
AA seq
2443 aa
AA seq
DB search
MDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPVGLLGVLTMA
FNPDNEYHFKNRMKVCQRNWAEVFGEGNMHAVSPISTFQKEPHGWLVDLVNRFAELGGFS
AIQSKLNSEDIELGAISALVQPFGVCAEYLNSSVVQPMLDPVIHKMIKYVQNVEEKDLKD
KRLVSIPELLSGIKLLCMRFQPDLVTAVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIE
DSTVSKSVKNAIDTDRLLNWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDEL
TKIWRIQSGQSSTVIENIHTIIAAAAVKFSSDQLNHLFVLIQKSWETESDRVRQKLLSLI
GRIGREARVETTTGKVLEVLWELAHLPTLPCSLIQQALEEHLTILSDAYAVKEAIKRSYI
IKCIEDIKRKMKPPRKVMSSSKNESSQHNNPQFVWVVPALRQLHEITRSFIKQTYQKQDK
SIIQDLKKNFEIVKLVTGSLISCHRLAASVAGPGGLVGATLVDGRYTYREYLEAHLKFLA
FFLQEATLYLGWNRAREIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKI
LKLESYEITMNGFSLFKTFFENVNLCDHRLKRQGTQLSVEKLELIGMDFIWKIAMESPDE
EIANEAIQLIINYSYINLTPRLKKDSVSLHKKFIADCYTRLEAASSALGGPTLTHAVTRA
TKMLTATAMPTVATSVQSPYRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFH
GHLLTLNVTYESTKDTFTIEAHSNETVGSVRWKIAKMLNSPVENIQIFANDSLLTVNKDQ
KLLHQLGFSDEQILTVKTSGSGTPSGSSADSSTSSSNSSSVFSSSYAMEQEKSLPGVVMA
LVCNVFDMLYQLANLEEPRITLRVRKLLLLIPTDPAIQEALDQLDSLGRKKTLLSESSSQ
SSKSPSLSSKHQHQPSASSILESLFRSFAPGMSTFRVLYNLEVLSSKLMPTADDEMARNC
AKSFCENFLRAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQTMPTLLD
EDFVKDGVEALSSRPFRNVSRQASRQMSICGTPEKSSYRQLSVSDRSSIRVEEIIPAARV
AIQTMEVNDFTSTVACFMRLSWAAAAGRLDLVGSSQPIKESNTLFPAGIRNRLSSSGSNC
SSGSEGEPTALHAGICVRQQSVSTKDALIAGEALSLLVTCLQLRSQQLGSFYNLPCVADF
IIDILLGSPSAEIRRVACDQLYTLSQTDTSAHPDVQKPNQFLLSVVLGAQLPLWSPTSIM
RGINQRLLSQCTEYFDLRCQLLDDLTSSEMEQLKISPAAMLEDEITWLDNFEPNRTAECE
TSEADNILLAGHLRLIKTLLSLCGAEKEMVGSSLIKPLLDDFLFRASRIILNSHSPAGSA
AISQQDFHPKCSTADSRLAAYEVLVMLADSSPSNLQLITKELLSMHHQCDPALTKEFDYL
PPVDSRSISGFVGLKNGGATCYMNAVFQQLYMQPGLPEALLSIDDDTDNPDDNVFYQVQS
LFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKIGRDQI
FKNTFQGIFSDQKICKDCPHRYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSNAY
YCEKCKEKRTTVKRTCIKVLPSLLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPYTV
SGMARQDSSSEVGENGRNTEQGGGGSPRKKVAPTENYELVGVIVHSGQAHAGHYYSFIKD
RRGCGKGKWYKFNDTVVEEFDLTDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYML
FYQRVSDQNSPVLPKKSRVSVVRQEAEDLSLSAPSSPEISPQSSPRPHRPNSDRLSILTK
LVRKGEKKGLFVEKMPVRIYQMVRDENLKFMKNRDVYSSDYFSFVLSLASLNATKVKHPY
YPCMAKVSLQLAVQFLFQTYLRTKKKLRADTEEWIATIDALLSKSIDACQWLVEYFVGPE
GRELVKTFLLECSVREVRVAVATILEKTLDSALLYQEKLKTLHQLLEVLLALLDKDVPEN
CKNCAQYFLLFNNFVQKQGIRASSLLLRHSALRHMVNFLLGPNRQSNQNRRWSSAQAREF
GYLHNTVALLVLHSDVSSQRNVAPGLFKQRPPLSITASGPLLALHEEVEALLFLSEGKPY
LMEVMHALRELTGSLSVLMEMVVYCCFCNEHFSFTVLHFIKTQLETAPPHELKNIFQLLH
EILVIEDPLQVERIKFAFETENGLIALMHHSNHVDSSRCYQCVKFLVTLAQKCPTAKDYF
KENSHHWSWAVQWLQKKMSEHYWAPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKD
QSGSSNGSESSPANENGERHLQQGSESPMMIGEPKSDLDDVDP
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atggacagatgcatgcctgaggcatttaaaaagctgttgacatccagtgctgttcacaag
tggggaaccgaaatccatgaaggaatctacaacatgctcatgctgctggtggacctggtt
gcagagagagtaaaacaagatccaatccccgtgggcctgcttggtgtgcttacaatggca
tttaatcccgacaatgaatatcatttcaagaaccgaatgaaggtgtgccagagaaactgg
gcagaagtctttggggagggcaacatgcatgctgtctcacccatatccacttttcagaag
gaacctcatgggtggctggtggatctggtaaacaggtttgcagagttgggtggattttca
gcaattcagtccaaactcaattctgaagatattgaacttggggcaatctctgcgttagtt
caaccatttggagtttgtgcagagtatcttaactcttctgtagtacagcccatgctggat
ccagtcattcataaaatgattaaatatgtacagaatgtagaagagaaggacttgaaagac
aagaggctggtgagtatccctgagctcctgtctgggatcaaactgctgtgtatgcgcttc
cagcctgacctggtcacggcggtcgatgacttgcggctggacattctgctgcgcatgttg
aaatccccccacttcagtgcaaaaatgaattccctcaaagaggtgacaaaattaatagaa
gacagcactgtgtccaagtcagtgaagaatgcaatagacacagaccgactgctgaattgg
ctcgtggagaattcagtcctgtcaattgctctggaaggtaatatagaccaagcacaatac
tgtgatcgtataaagggaattattgaactgctgggcagcaaattatctttagatgagctc
actaaaatttggagaattcagtcgggacaatcctccactgtgattgagaacatacacacc
attattgctgcagctgctgtgaagtttagctctgaccagctcaatcatttatttgttcta
atccaaaagagctgggagacagagagtgaccgagtgaggcagaagctgctgagcctcatt
gggcgcattggccgagaagcacgagtggaaacaaccactggcaaggttctggaggtactt
tgggagctggctcatcttccaacgttaccgtgtagtcttatccagcaggccttggaggaa
cacctgacaatcctcagtgatgcttatgcagtgaaagaggcaatcaaaaggagctacatc
atcaagtgcatagaggatatcaagaggaaaatgaagcctcccagaaaagtgatgagcagt
tctaaaaatgagtcgtcccagcacaataatcctcagtttgtgtgggtggtgccagccctg
cgtcagctccacgaaatcacgcgttcgtttattaagcagacttaccaaaaacaagacaag
agcattattcaagatttaaagaaaaactttgaaatagtgaagttggtgacaggaagcttg
atatcctgtcaccgtttggctgcatctgtggcaggcccaggagggctggtgggagcaaca
ctggtggatggacgatacacttaccgggagtatttggaggcacatctaaaatttttggca
ttttttctgcaagaagccaccctttatttgggctggaatcgtgccagggagatctgggaa
tgccttgtaactggccaagatgtttgtgagttggaccgagagatgtgctttgagtggttt
acaaaagggcagcacgatctggagagtgatgtgcagcaacagctcttcaaagagaaaatt
cttaaactggaatcatatgaaattactatgaatggttttagtttatttaaaacgttcttt
gaaaatgtgaacctgtgtgaccatcggctgaagaggcaaggaactcagctgagcgtagaa
aaactggaattaataggaatggatttcatttggaagattgcaatggagtcaccagatgaa
gaaattgccaatgaagctattcaactgataataaattacagctatattaatctaactccc
agattgaaaaaggattcagtttccctgcacaagaaattcattgctgattgctacacacga
ttagaggcagccagctccgcgctcggcggtccaacattaacacacgctgtcaccagagct
acaaaaatgctcacagcaactgccatgcctacggtggcaacatcagttcagtctccttac
aggtcaactaaacttgtaataattgagagactgctgctgttggcagagcgttatgtgata
acaatagaggacctttactctgttcccagaactattctacctcatggtgcctctttccat
ggacatcttttaacccttaatgttacatatgagtctaccaaagataccttcaccatagag
gctcatagcaatgaaactgtaggaagtgtcaggtggaagatagcaaagatgttgaattca
cctgtggaaaatatacagatatttgccaatgacagcctgctaacagtaaacaaagatcag
aaactactccatcagctgggcttctctgatgaacaaatccttacagtaaaaacatcaggc
agtgggactccatcagggagctctgcagattcctcaaccagctccagcaacagcagcagt
gtatttagttcatcctatgcaatggaacaggagaaatccctccctggagtcgtcatggct
ctcgtgtgcaatgtgtttgatatgctttaccagcttgccaacctggaggagccaaggata
acgctgcgagtgaggaaactcctgctcctgattcccactgacccagctattcaggaggct
cttgatcagcttgattccctgggaaggaagaaaacactgctttcagaatccagttctcag
tcctcaaaatccccatccttgtcttcaaaacaccaacatcagcccagtgccagttcaata
ctagaaagtcttttcagatcttttgctccaggcatgtccacgttcagagtgctctacaat
ttagaggtgctgagctccaagctgatgccaactgcagatgatgaaatggcaagaaactgt
gccaaatctttctgtgaaaacttcctcagagcgggaggtttgagtttggtggtgaatgtg
atgcagagagattccatcccatcagaggtggactatgaaacaagacaaggagtctattcc
atctgcctgcagcttgcaaggtttttgctggttgggcagacaatgcccaccctgctggat
gaggatttcgtcaaggatggggtggaagctctgtcctcgcggcccttccgcaacgtgagc
aggcaggccagcaggcagatgtccatctgtggcactcctgagaagtcctcctaccgccag
ctctccgtgtctgacagatcctccatcagggtagaagaaatcatcccagctgcaagagtt
gccatacaaaccatggaggtgaatgatttcacctccacagtggcttgtttcatgcgcctc
tcgtgggctgctgctgcaggacgcctggacctcgtgggaagtagtcagcccatcaaagag
agcaacactctcttccctgctgggattagaaacagacttagcagctcaggaagcaactgc
agttcaggaagcgaaggggagcccacagcactacacgctgggatctgtgtgaggcagcag
tctgtgtccaccaaagatgctctcattgctggggaagccttgtctctcttagtaacctgc
cttcagctacgtagtcagcagctaggatctttttacaatttgccttgtgttgctgatttc
atcattgatattctgcttggatcaccaagtgctgagattcgtcgcgttgcctgtgaccag
ctgtacacccttagccagacagacacatcagcccacccagatgtacaaaagccaaaccag
ttcctcctgagcgttgttcttggggcccagctgcctctttggtcaccaaccagcatcatg
agaggaatcaaccagagacttttgtcccagtgtacagaatattttgacctgagatgtcaa
ttactggatgacctgacatcatcagaaatggagcagctgaagatcagcccagctgccatg
ttagaagatgagatcacttggctggacaattttgagcccaaccgcacagccgagtgtgag
accagtgaggctgacaacatcctgctagcaggacacttgaggctcatcaagactctcctc
tcactctgtggggcagagaaggaaatggttggttcatctttgattaagccattgttggat
gatttcctgttccgagcatccaggattattctgaacagccattccccagcaggcagtgct
gcaatcagtcagcaagacttccatccaaagtgcagcacagcagacagcagattagctgct
tatgaggtgctggtaatgctggctgatagctcaccctccaatctccagcttattacaaag
gagctgctttccatgcaccaccagtgtgaccctgcactcaccaaggagtttgattacctt
ccaccagtggacagtcgctccatttctggatttgtgggactgaagaatggtggtgctact
tgttacatgaatgctgttttccagcagctctatatgcagcctggtctcccagaggccttg
ctttccattgatgatgatactgacaatcctgatgacaatgtgttctatcaagttcaatct
ctttttggtcatttgatggaaagcaagctacaatattatgtacctgagaacttttggaag
attttcaagatgtggaataaggaactttatgttagagagcaacaggatgcttatgagttc
ttcaccagtcttatagatcaaatggatgagtacctcaagaaaataggaagagaccaaata
tttaagaatacttttcaaggaatcttctctgatcagaagatctgcaaggactgtcctcac
aggtatgagcgtgaggaagccttcatggctctcaaccttggtgtgacttcatgtcaaagc
ctggaaatatcactggatcagtttgttagaggagaggttctggaaggaagcaatgcatac
tactgtgaaaagtgcaaagaaaagagaactacagtgaagcgcacctgcattaaggttttg
cccagcctgctggtgattcacctgatgaggtttggctttgactgggagagtggccgctct
attaaatacgatgaacaaataaggtttccctggatgctgaacatggaaccttacactgtg
tcagggatggctcgtcaggactcgtcctcagaagtgggggaaaatggcaggaacacagag
cagggaggaggaggctccccgaggaagaaggttgcccctacagaaaactacgagctcgtt
ggtgtgattgtccacagtggccaggctcatgcagggcactactactccttcatcaaggac
aggagaggatgtggaaaaggaaagtggtataaatttaatgacaccgttgttgaagaattt
gatttgactgatgaaaccctggaatatgaatgttttggtggagaatatagacctaaagtc
tatgatcaatcaaatccctaccccgacgtgcgccggcgctactggaacgcctacatgctg
ttctaccagagagtgtccgaccagaactcccctgtgctgccaaagaaaagcagagtcagt
gtcgtgaggcaggaagctgaggacctctccttatctgctccctcttcaccagaaatatca
ccccagtcatcacctcgaccccacaggcccaacagtgaccgtctgtccatcttgaccaag
ctggttcgaaaaggagaaaaaaaggggctctttgtagagaaaatgcctgtgaggatttat
cagatggtgagagatgaaaacttgaaatttatgaagaacagagatgtatacagtagtgac
tacttcagttttgttctgtcattagcttccctgaatgctactaaggtaaagcatccctat
tatccctgcatggcaaaagtgagcttacagctggcagtccaattcctcttccaaacctat
ctccgaaccaagaagaaactcagggctgatacagaagaatggattgccaccatagatgca
ctgctctccaaaagcattgatgcttgtcagtggttggtggagtattttgttgggccagag
ggccgggagcttgtaaagactttcctcctggaatgcagcgtgagggaggtgcgagttgct
gtggccacaatccttgaaaaaaccctcgacagtgccttgctttatcaggagaagttaaaa
actctacatcagttactggaggtgctacttgctctactggataaagatgtacctgaaaac
tgtaaaaactgtgctcagtactttttgctattcaataactttgtacagaagcagggaata
agggctagcagtcttctcctcaggcactctgccctgaggcacatggtcaactttctcctt
ggccccaacaggcaaagcaatcagaaccgcaggtggagttcagcacaggcacgtgagttt
ggatatctccacaacactgtagcactgcttgtcttgcactctgatgtctcctcacaaaga
aatgttgctcctggtctctttaagcagcgtccacctctcagcatcaccgcttcagggcca
cttctggcactccatgaagaagtggaagccttgctattcctgtctgagggaaaaccctac
ttaatggaggtgatgcacgcgctgcgggagctgacggggtcgctgtcggtgctcatggag
atggtggtgtactgctgcttctgcaacgagcacttctccttcactgtgctgcacttcatc
aagactcaactggaaactgctcctcctcatgaactgaaaaacatattccagttactccat
gagatcctggttattgaagatccattgcaagtagagcgcatcaaatttgcctttgaaact
gaaaatggattaatagccttgatgcaccacagcaaccacgtggacagcagccgttgctac
cagtgtgtcaagttcctggttaccctggctcagaagtgccctactgcaaaagattacttc
aaggagaattcacaccactggagttgggctgtgcagtggctacagaaaaagatgtctgaa
cattactgggctcctcagagtaacgtgtccaatgaaacatccactgcaaaaaccttccag
cgcactatttcagcacaggacactctggcctatgccacagccctgctgaatgagaaggat
cagtctggaagcagcaatgggtcagaaagcagccctgccaatgagaatggagagaggcac
ctgcagcagggctcagagtctcctatgatgattggggagcctaaaagtgaccttgatgat
gttgacccttag
DBGET
integrated database retrieval system
