Geospiza fortis (medium ground-finch): 102038295
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Entry
102038295 CDS
T03755
Symbol
MATN1
Name
(RefSeq) matrilin 1, cartilage matrix protein
KO
K19467
matrilin
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102038295 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
102038295 (MATN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
Plasmod_Pvs28
EGF_LRP2
ASD2
Motif
Other DBs
NCBI-GeneID:
102038295
NCBI-ProteinID:
XP_005426977
LinkDB
All DBs
Position
Un
AA seq
471 aa
AA seq
DB search
MGSRSCAGTLCRTKPTDLVFIIDSSRSVRPHEFEKIKVFVSRVIEALDVGPNATRVGVIN
YASAVRSELSLQGPQSKAALLQAVRRIQPLSTGTMTGLAIQFAISRAFSATEGARGSAPN
FKKVAIVVTDGRPQDGVQDVSARARAAGIEIFAIGVGRVDMGTLRQMASEPLDEHVDYVE
SYSVIEKLTHKFQEAFCVVSDLCATGDHDCEQVCVSTPGAYRCACRDGFSLNSDGKTCTA
CNGGLGSALDLVFLIDGSKSVRPENFELVKKFINQIVDSLEVSDKQAQVGLVQYSSSVRQ
EFPLGQFKSKKDIKAAVKKMSYMEKGTMTGQALKYLVDSSFSVINGARPGVPKVGIVFTD
GRSQDYISDAAKKAKDSGFRMFAVGVGNAVEDELREIASEPVAEHYFYTADFRTISKIGK
KLQMKICVEEDPCECKSIVKFQTKVEELINSLQQKLEAVAKRIEALENKII
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccggagctgtgcaggcaccctgtgcaggaccaagcccacagacctggtgttc
atcatcgacagctcgcgcagcgtgcggccgcacgagttcgagaagatcaaggtgttcgtg
tcgcgcgtcatcgaggcgctggacgtgggccccaacgccacccgcgtgggcgtcatcaac
tacgccagcgccgtgcgcagcgagctgtccctgcagggcccccagagcaaggcagccctg
ctgcaggccgtgcgcaggatccagcccctctccacgggcaccatgaccggcctggccatc
cagtttgccatcagccgcgccttcagcgccaccgagggcgccaggggcagcgcgcccaac
ttcaaaaaggtggccatcgtggtgacggacgggcggccccaggacggggtgcaggacgtg
tctgcccgggccagggccgcgggcatcgagatcttcgccatcggcgtgggcagggtggac
atgggcacgctgaggcagatggccagcgagcccctggacgagcacgtggactacgtggag
agctacagcgtcatcgagaagctgacccacaagttccaggaggctttctgcgtggtgtct
gacctgtgtgccacgggggaccatgactgcgagcaggtgtgtgtcagcaccccgggggcc
tacaggtgcgcctgcagggacggcttcagcctcaacagcgacggcaagacctgcactgct
tgcaatggtggcttggggtctgctctggatcttgtgttcctcatcgatggctccaagagt
gtgaggcctgagaactttgagctggtgaagaaattcatcaaccaaatcgtggattcgctg
gaggtatcggacaaacaggcgcaggtggggctggtgcagtactccagctccgtccggcag
gagttccccctgggccagttcaagagcaagaaggacatcaaagcagcagtgaagaaaatg
tcctacatggagaagggcaccatgacaggccaggctctcaagtacctcgttgacagctcc
ttctccgtcatcaacggagcccggcctggcgtccccaaggtggggattgtcttcactgat
gggcgctcacaggattacatctcagatgctgccaagaaagccaaggactcaggatttcgg
atgtttgccgtgggagtgggcaacgctgtggaggatgagctgagggagatcgcctcagaa
cccgtggctgagcattatttctacactgccgacttcaggaccatcagcaagatcgggaag
aagctgcagatgaagatctgtgttgaggaagatccgtgcgagtgcaaatccatcgtgaag
ttccagaccaaagtggaagagctcatcaattccttgcagcagaaactggaagctgtggcc
aaaagaatcgaagccctggagaacaagatcatctaa
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