Geospiza fortis (medium ground-finch): 102038408
Help
Entry
102038408 CDS
T03755
Symbol
ABCA2
Name
(RefSeq) ATP binding cassette subfamily A member 2
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr02010
ABC transporters
gfr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102038408 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102038408 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102038408 (ABCA2)
Transporters [BR:
gfr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102038408 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
102038408
NCBI-ProteinID:
XP_005423870
LinkDB
All DBs
Position
Un
AA seq
2526 aa
AA seq
DB search
MGTPVLPMLLPGGCSVPKHPVPSALCHPQWVLAFEIFIPLVLFFILLGLRQKKPTIPVKE
VSFYTAAPLTSAGILPVMQSLCPDGQRDEFGFLQYSNSTVTQILEHLSEAVEQSSLFDPQ
HPGLEEELESLRRHLEALSSPEPSSMETHFSSQAGSSFTLAWAAKDQGELRRFLMQNLSL
PNSTAELLLGSSINLREVYQQFFDSFPLVPDETHKQNLWDGFGPSKKMTQLEKSLPSGWR
SLQEGLVHRVLRDPVAAPHRPALLHMLSQALGLTSTAVAPAISDSPQAFVTEMENVLFTG
PVLEQLTCEQYPGALHRLLRVSPRQRPLLAAYRALACNGSQTIRQERFAQLASELQKQLD
TPKIVSRLKLEEVNSTATQHRLRALLEDLMEMEKVLQDMDILSALAKLLPRGACASKAAP
PMANSTSWASANATTGNATAEEEEGAGESLSGIDNPQGQFSAFVQLWAGLQPILCGNNRT
IEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTSNPKILYAPVGTEVDKVILKANETFAFV
GNVTHYAKAWLNISPEIRAYLEEGRLQRRIHWLQQLTADLHKHPEILNVSDSDVLHNFLN
GNFSLPNASILLQQLDTIDNAACGWVRFMAKVSVDIFKGFPDEESIVNYTLNQAYQDNVT
VFASVIFQTNRDGSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWI
QDMMERALINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMM
IQHIVTEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLMHSDV
LIIWLFLAIYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKI
TAFEKCIAEFTQTCSXXXXXXXXXXXXXXFGLGSKYFALYEVAGVGIQWHTFSQSPVEGD
DFNLLLSMMMLVVDAMVYGVLTWYIEAVHPGMFGLPRPWYFPFQKSYWLGNGRVETWEWT
WPWSRNTRLSIMEEDQACAMESRRLEETRGIEEEPTHLPLVVCIDKLTKVYKTDKKLALN
KLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDKIRKNLGM
CPQHNVLFDRLTVEEHLWFYSQLKSMAEEEIRKEMDKMIEDLELSNKRHCQVQTLSGGMK
RKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLG
DRIAIISHGKLKCCGSPLFLKSTYGDGYKLTVVKKQSDTRNGTGLGSSHSPLSHSSVSPC
SEPRVSQFIKKYVASCLLISDTNTELSYILPSEAVKKGCFERLFQHLEQSLEELDLTSFG
LMDTTLEEVFLKVSEEDQSLENSDVDLKDSKDALQPPASELGPKSEANGESLAEAAMPEK
PEVELSNLVTCSKLAQSQASLRSASSVGSVRGDEGGAYSEFFGDYVPLFDNRQDPDNISL
QEVEAEDRDLAGQGSFKLEGSWLKLRQFHGLIVKRFHCAKRNTKALFSQILLPAFFVCVA
MTVALSVPEIGDLPPLILSPSQYHNYTQPKGNFIPYANEERREYRIRLSPDASPQQLVNT
FHLPSGVGATCVLKTPFNNTLDQPMQTLNLNSNESKMLAAKYFDAMCIDSFTQGLPLSNF
VPPPPSPAPSDYPMSVDEDLAPWVVTLHPICSSGTVTSAPALPHIIHEPIKCTCSMQGTG
FSCPSGVGGHPPQMKVVTGDILTDITGRNVSEYLLYTSDRFRLHRYGALTFGNVQKSIPA
SFGAKAPATVRKIAVRRTAQVFYNNKGYHSMPTYLNALNNAILRANLPKSKGNPAAYGIT
VTNHPMNKTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKATKAKHLQFVS
GCDPVIYWLANYMWDMLNYLVPATCCIIILFVFDLPAYTSPTNFPAVLSLCLMGWSITPI
MYPASFWFEVPSSAYVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLVFP
NYNLGHGLMEMAYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAMTIEGFVGFFITIMC
QYNFFRKPQRLPVSTKPIEDDIDVANERHRVLRGDADNDMLKIENLTKVYKSRKIGRILA
VDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFINGHSILKELLQVQQSL
GYCPQFDALFDELTAQEHLELYTRLRGIPWKDEERVVKWALKKLELTKHADKPASTYSGG
NKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDVIKTGRSVVLTSHSMEECE
ALCTRLAIMVNGRLKCLGSIQHLKNRFGDGYMITVRTKSSLNVKEVVRFFNRNFPEAVLK
ERHHTKAQYQLKSDQISLAQVFSKMEQVVDVLGIEDYSVSQTTLDNVFVNFAKKQSDNLE
QQETSPSCVLQSPLERVLSLLRPRTAPTELRALVVEEQEDLETDDEGLISFEEERAQLSF
NTDTLC
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atggggacccctgtactgcctatgcttctcccaggtggctgttccgtccctaagcatcct
gttccctctgctctgtgtcatccccagtgggtactggccttcgagatcttcatccccctg
gtgctcttcttcatcctcctggggctgcggcagaagaagcccaccatccctgtgaaggaa
gtctctttctacacggcggccccactcacgtcagccgggatcctgccggtcatgcagtcc
ctgtgccccgacggccagcgtgatgagtttggcttcctgcagtactccaactccacggtg
acacagattctggaacacctcagcgaggcagtagagcaaagcagcctcttcgacccgcag
catccaggactggaggaggagctggagtcgctgcgccggcacctggaggccctcagcagc
cctgagcccagctccatggagacccacttcagcagccaagcagggtccagcttcacactg
gcatgggcagccaaagaccagggtgagctgcggcgcttcctgatgcagaacctgtccctc
cccaacagcacagctgagctgctcctaggctccagcattaacctgcgggaggtgtaccag
cagttttttgattcctttcctttggtacctgatgagacccataagcaaaacctgtgggat
gggtttggccccagcaagaagatgacacagctggagaagagtctccccagtggctggagg
agcctgcaggaagggctggttcacagggtgctgcgggacccagtggcagccccacatcgt
ccagcactgctccacatgctctcccaggctctgggcctcaccagcactgctgtggcacct
gctatctctgatagcccccaggcctttgtcaccgagatggagaatgtcctcttcaccggg
ccagtgctagagcagctgacatgtgagcagtacccaggggcactacaccgcctcctgcgc
gtgtctcccaggcagcggccactgctggcagcgtaccgggcactggcctgcaatggcagc
caaaccatccgccaggagcgctttgcccagctggcctccgagctccagaagcagctggac
acccccaagatagttagcaggctgaagctggaggaagtgaacagcacagccactcagcat
cgcctccgtgccctcctcgaggatttgatggagatggagaaggttctccaggacatggac
atcctctcagcactggctaagctgctgcccaggggagcctgtgccagcaaggctgcgcca
cccatggccaacagcaccagctgggccagcgccaatgccacgactggcaatgccacggca
gaggaggaagagggcgccggggagagcctgtctggcatcgacaacccccaggggcagttc
tcagcatttgtgcagctctgggcagggctgcagcccattctttgcggcaacaaccggacc
atcgagcctgaggcactgaagcagggcaacatgagctcgctgggcttcaccagcaaggag
cagcgaaacttgggcctccttgtgcatctgatgaccagcaaccccaaaatcctgtatgca
cctgtgggcactgaagttgacaaggtcatcctgaaggccaacgagaccttcgcctttgtg
ggcaatgtcacccactatgccaaggcatggctgaacatctcccctgagatccgagcctac
ctggaggagggcaggctgcagaggcgcatccactggctccagcagttgactgctgacctc
cacaagcacccagagattctgaatgtctctgacagtgatgttcttcacaactttctcaat
ggcaacttctccctgcccaatgccagcatcctgctccagcagctggataccattgacaat
gctgcctgcggctgggtccgcttcatggccaaggtcagcgtggacatcttcaaaggcttc
ccagatgaggagagcattgtcaactacacgctgaaccaggcctatcaggacaatgtcacg
gtctttgccagtgtcatcttccagaccaacagggatggctcgttgcctccccatgtcatg
tacaagatccggcagaattccagcttcacagagaagaccaatgagatccggcgggcatac
tggcggcctggccccaacaccggcggccgcttctacttcctctatggctttgtctggatc
caggacatgatggagcgtgcccttatcaacacatttgttggccacgatgtggtggagcct
ggcaactatgtacagatgttcccatacccatgttatacccgggatgactttctctttgtc
atcgagcacatgatgcctctctgcatggtgatctcctgggtctactcagtggccatgatg
atccagcacattgtgacagagaaggagcatcgcctgaaagaggtgatgaagatgatgggc
ctgaacaatgcggtgcactgggtggcttggttcatcactggctttgtccagctctccatc
tcggtcacagcactcactgccattctcaagtacggcaaggtcctgatgcatagcgacgtc
ctcatcatatggctcttccttgccatctatgctgtggccaccatcatgttctgctttctg
gtgtcggtgctctactccaaggccaagctggcctctgcctgtggtggcatcatctacttc
ctcagctacgtgccctacatgtatgtcgccatccgggaggaggtggcccatgacaagatc
acggcctttgagaagtgcattgcggaattcacccaaacctgttctnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnncctttgggttgggctccaagtactttgcactgtat
gaggtggctggcgtgggtatccaatggcacaccttcagccagtcacctgtggaaggagat
gacttcaacctcctgctgtccatgatgatgctggtcgtggatgccatggtgtatggggtg
ctcacatggtacatcgaggccgtgcacccgggcatgttcggcctgccacggccctggtac
ttccctttccagaagtcttactggctgggcaatgggcgcgtggagacctgggaatggacc
tggccatggtcacgcaacacccgcctcagcatcatggaggaggatcaggcctgtgccatg
gagagccggaggctggaggagacaaggggcatcgaggaggagccaacccacctccccttg
gtcgtctgcattgacaagctcaccaaagtctacaagacagacaagaagctggcgctaaac
aagctgagcctcaacctctacgagaaccaggttgtgtccttcctggggcacaatggtgca
ggcaagaccaccaccatgtccatcctcactggcttgttccctccaacatcgggctctgct
accatctatggccatgatatccgtacggagatggacaagatccggaagaacttgggcatg
tgtccccagcataacgtgctctttgacaggctgacggtggaggagcatctctggttctac
tcgcagctcaagagcatggcagaggaggagatccgcaaggagatggacaagatgattgag
gacctggaactttccaataaacggcactgccaggtgcagactctctcgggtggcatgaag
aggaagctgtcagtggccattgcctttgtgggtgggtcgcgagctgttatcttggatgag
cccacagctggtgtggacccatatgcccgaagggccatctgggacctcatcctcaagtac
aagccagggaggaccatattgctctccacacaccacatggatgaggctgacctgctgggg
gaccgcattgccatcatctcccatggcaagctcaagtgctgtggttctccattgttcctc
aagagcacctatggtgacggctacaagttgacagtggtgaagaagcagtcggacaccagg
aatggcacaggtctggggagcagccacagccccctgagccactcctctgtcagcccctgc
tctgagcctcgtgtctcccagttcatcaagaagtatgtggcctcctgcctcctcatctca
gacaccaacacagagctctcctacatcctgcccagtgaggctgtcaagaagggctgcttt
gagaggctcttccagcacttggagcagagcctggaagagctagacctcaccagttttggg
ttgatggacaccacgctggaggaggtcttcctgaaggtgtctgaggaggatcagtctctg
gagaacagtgacgtggacttgaaggactccaaggatgccctgcagccacctgcctctgag
ctgggcccaaaatctgaagccaatggggagtccctggccgaagcagccatgccagagaag
cccgaggtggagctcagcaacctggtgacctgctccaagctggcgcagtcgcaagcatcc
ctgcgctcagcgtcctcggtgggctccgtgcgtggcgatgaaggtggggcttattctgaa
ttctttggggattacgtgcccctgttcgataaccggcaggaccccgataacatcagtctg
caagaggtggaagcagaggatcgtgacctggcaggtcagggaagcttcaagctggaaggc
tcatggctgaagctgcgccagttccatgggctgatcgtcaaacgcttccactgcgccaag
cgcaacaccaaggccctcttctcgcagatcctgctgcccgcctttttcgtctgcgtcgcc
atgactgtggcactctctgtgcccgaaataggtgacctgccacccctcatcctctcgcca
tcccaataccacaactacactcagcccaagggtaacttcattccttacgccaacgaggag
cggcgtgagtaccgcattaggctgtctcccgatgccagccctcagcagctggtgaacact
ttccatctgccttctggtgtgggggccacctgtgtgctcaagacaccctttaacaacacg
ctggaccagcccatgcagaccctcaacctcaatagcaatgagtccaaaatgctggcagcc
aagtactttgatgccatgtgcatcgactccttcacccagggccttccgctttccaacttt
gtgccaccacctccatccccggctccctctgactaccccatgtcagtggatgaggaccta
gccccttgggtggtgacgctccaccccatctgctcctcaggaactgtgacctcagcccct
gccctgccccacatcatccatgagcccatcaagtgcacgtgctccatgcaggggactggc
ttctcctgccctagtggcgtggggggccatcccccacagatgaaggtggtgacaggggac
atcctgacagacatcacagggcgcaacgtctctgagtatctcctctacacctcggaccgc
ttccggctgcacaggtatggggcactcacatttggaaacgtccagaaatccatccccgcc
tccttcggagccaaggctccagccacagtgcgcaagattgctgtgcggagaacggcccag
gtcttctacaacaacaagggctaccacagcatgcccacttacctcaatgccctcaacaat
gccatcctgagagccaacctgcccaagagcaagggcaaccctgctgcctatggcatcaca
gtcacgaatcaccccatgaacaaaacgagtgccagcctgtccctggattacctcctgcaa
ggcacagatgtggtgattgccatcttcatcattgtggccatgtccttcgtcccagccagc
tttgtggtattcctggtggccgaaaaggccaccaaggccaaacacctgcagtttgtgagt
ggctgtgaccctgtcatctactggttggccaactacatgtgggacatgctaaactacctg
gtgccggccacgtgctgcatcatcatcctgttcgtgtttgacctcccagcatatacctct
cccaccaacttccccgctgtcctgtccctctgtcttatgggctggtccatcacccctatc
atgtacccagcctccttctggtttgaagtgcccagctctgcttacgtcttcctcattgtc
atcaatctcttcattggcatcacagccactgtcgccacgtttctgctgcagctctttgag
cacgacaaggacctgaaggtggtgaacagctacctgaagagctgcttcctcgtgttccct
aactacaacctgggccatggcctgatggagatggcctacaacgaatacatcaatgagtac
tatgccaagattgggcagtttgataaaatgaaatcacccttcgaatgggacatcgtgaca
cgggggcttgttgccatgacaattgaaggctttgttggcttcttcatcaccatcatgtgc
cagtacaatttcttccggaagccccagcgcctgcccgtctccaccaaacccattgaggat
gacattgatgtggccaatgagaggcaccgggtcctgcgtggtgacgctgacaatgacatg
ctaaagattgagaacctcacaaaggtgtacaagtcccgcaagattgggcgcatcctggct
gtggaccggctgtgtgtgggtgtgcgccctggggagtgctttgggctgctgggtgtcaac
ggtgcaggcaagaccacaacattcaagatgctgacaggggatgagagcaccacaggtgga
gaggccttcattaacggtcacagcatcctgaaggagctcctgcaggtccagcagagcttg
ggctactgcccccagttcgacgcgctctttgatgagctgacagcccaggagcacctggag
ctctacacccgcctgcgtggcatcccctggaaggatgaggagcgggtggtcaagtgggca
ctgaagaagctggagttgaccaagcacgcagacaagcctgccagcacctacagcgggggc
aacaagaggaagctatccacagccattgcactcattggatacccagccttcatcttcctg
gatgaaccaaccacagggatggaccccaaggcacgacgcttcctctggaacctcatcctg
gatgtcatcaaaacgggtcgctccgtggtgctcacgtctcacagcatggaggagtgcgag
gccctctgcacccgcctggccatcatggtgaacgggcggctcaagtgtcttggcagcatt
caacacctgaagaacaggtttggtgatggctacatgatcacagtgcgcaccaagtccagc
ctcaatgtcaaggaggtggtgaggttcttcaaccgtaacttccctgaggctgtcctcaag
gagcgtcatcacaccaaggcccagtaccagctgaagtcagaccagatctcactggcacag
gtcttcagcaagatggagcaggtggtggatgtgctgggcattgaagactactctgtcagc
caaaccacactggacaatgtgtttgtgaattttgccaagaagcaaagtgacaacctggag
cagcaggagaccagccccagctgtgtcctgcagtcgcccctggagcgtgtgctgagcctg
ctgcgcccccgcaccgcccccactgagctgcgggccctcgtggtggaggagcaggaggac
ctggagactgatgatgaaggcctcatcagctttgaggaggagagggctcagctctccttc
aacacggacacgctgtgctga
DBGET
integrated database retrieval system
