Geospiza fortis (medium ground-finch): 102038417
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Entry
102038417 CDS
T03755
Symbol
TRIM24
Name
(RefSeq) tripartite motif containing 24
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gfr01001
]
102038417 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102038417 (TRIM24)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102038417 (TRIM24)
Protein kinases [BR:
gfr01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
102038417 (TRIM24)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102038417 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
102038417
NCBI-ProteinID:
XP_005426485
LinkDB
All DBs
Position
Un
AA seq
920 aa
AA seq
DB search
MDQVGVIRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEAHGFCVE
CVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHKKEQLKLYCETC
DKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIETLITKLMEKTKYIKYTGKQIHNRILEV
NQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLETLAKEHRMKLLQQQQEVAGLSKQLEH
VMNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDPSPVTNNTIQFHCDPSFWAQNIF
NLGSLVIEDKETPPHMPKSPVMEANLQPPGSLPPNQLSKFPTQISLAQLRLQHMQQQVMA
QRQQAQRRAGPAVLPNTRVPGAMQQPPASHQHAPPRLIHFQNHSPKPNGSALPGQQMRFP
QNQNLPRPAVKPNPLQMAILAQQAIKQWQISSGQASSIPSTASSSTSTPSSPTVTSAAGC
DGKNYGPPVIDLSSPVGSSYNLPSLPDIDCSGNITLDNAVRKDGTVEQNQPKPPSNRTVQ
SPNSSVPSPGLSGGVSVTSVHPPIRSPSASSVGSRESSGSSSRPPGADSTHKVPVVMLEP
IRIKQESSPSNEAFDFPIVVVKEEEEESRPRNSILTSLLLDTSHNSTSEEAMLRTDAPDS
TDDQPGALQENTFPGKTGWMGSSHAGEGRKEDDPNEDWCAVCQNGGKLLCCEKCPKVFHL
SCHVPTLMSFPSGEWICTFCRDLSKPEVEYDCDKPAHSSEKRKLEDTMGLAPIDRRKCER
LLLYLYCHEMSPAFQDPVPPTVPDYYRIIKKPMDLSTIKRRLEVTNSFYTKPEDFVADFR
LIFQNCAEFNEPDSEVADAGMKLEAYFEDLLRNLYPERKFPVQPSSKSEKDNPELTDDSD
DDFVQPRKKRLSSNKKPIQL
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagtcggtgttatccgctgtccaatttgtggtcaggaatgtgcagagagacac
atcatagataacttttttgtgaaggataccacagaggttcccagtagcacagtagagaaa
tcaaatcaggtctgcacaagctgtgaggacaatgcagaagctcatgggttttgtgtggaa
tgtgtagagtggttgtgcaagacctgcatcagagctcaccagagggttaaattcacaaag
gatcatactgtgaggcagaaagaggaagtatctccagaggcagttggagtgaccagtcag
cggccagtgttctgcccttaccacaaaaaggagcagctgaagttatattgtgaaacctgt
gacaagctgacctgcagagactgccagttactagagcacaaagagcacaggtaccagttt
atagaagaagcttttcagaaccagaaagttatcattgagacactaatcaccaaattgatg
gagaagactaagtacataaaatatacagggaaacagatccataacagaattcttgaagtg
aatcagaatcaaaagcaggtggaacaggatattaaagttgccatatttacactgatggta
gaaataaataaaaagggaaaagctctgctgcatcagttggagactctggcaaaagagcac
aggatgaaacttctgcagcaacaacaggaagtggcaggtctctctaaacagctggaacat
gtcatgaatttttccaaatgggcagtttccagtgggagcagcacagcactgttgtacagt
aaacgtttgattacatatcgactacggtatctcctccgggcaaggtgtgatccttcccca
gtgactaacaataccatccagttccactgtgatcctagcttctgggctcagaatattttc
aatctaggttctttagtaattgaagataaggaaactccaccacatatgcccaagagccct
gtgatggaagcaaacttgcagccaccaggcagcttacctcccaaccagctctccaagttc
ccaacccagatcagcttggctcagctgcgcctgcagcacatgcagcagcaggtcatggct
cagaggcagcaagcgcagcgcagagcaggacctgcagttctgccaaacactagagtgcca
ggagccatgcaacaacctcctgcttctcatcagcacgcacctccacgcttgattcatttt
cagaatcatagtcctaagccaaatggttcagctcttcctggacaacagatgagatttccc
caaaatcagaacctaccaaggccagcagtgaagcccaacccattgcaaatggcaatcttg
gcacagcaagctataaaacagtggcagatcagtagtggacaagcttcatccatcccttca
actgcaagcagctccacatcgactccatccagccccacagtcaccagcgctgctggatgt
gatgggaagaattatggcccccctgtgatagatttgagttccccagtgggcagctcctat
aatctgccatccctccctgatatcgattgttcaggaaacatcacactggataatgctgta
aggaaggatggcactgtagagcagaatcagccaaaacccccttcaaacaggactgtgcag
tcaccaaactcctcagtgccatcaccaggcctctcaggaggagtcagtgtgacaagcgta
caccctccaattcgttcacccagtgcctccagtgttgggagcagagagagttctggctcc
tccagcaggccaccaggagctgattccacacacaaagtccctgttgttatgttggagccc
atcagaattaagcaggagtcaagtccctcaaacgaggcctttgatttccccatcgttgtc
gtgaaggaagaggaggaggaatcccggcctcggaattccatacttacttccttgctgctg
gataccagtcacaattccacttctgaggaagccatgctaagaacagatgcaccagacagc
acagatgaccagccaggggcactgcaggagaacacattccctgggaaaacaggatggatg
ggatcctcccacgctggcgagggcagaaaagaggatgatcccaatgaagattggtgtgct
gtatgccaaaatggagggaagctcctctgctgtgagaagtgtcccaaagtattccatctt
tcttgtcatgtccctacgttgatgagctttccaagtggtgagtggatctgtacattctgt
cgggatttgtccaagccagaagttgaatatgactgtgataaacctgctcacagctctgaa
aaaagaaaattggaagacaccatgggtttggcacccatagaccgcaggaagtgtgaaaga
ctgctgctatacctctactgtcatgaaatgagtcctgcctttcaagatccagttcctccc
acagtccctgattactacagaataatcaagaagcctatggacttgtcaaccatcaagaga
agacttgaagtgaccaattcattctacacaaagccagaagattttgtggctgatttcaga
ctgattttccaaaactgtgctgaatttaatgagcctgattcagaagtggctgatgctggc
atgaaactcgaagcctactttgaagaccttctaaggaatctttatcctgagagaaagttc
cctgtacagccaagcagcaagagtgaaaaagataacccagagcttactgatgactcggat
gatgactttgtacagccccggaaaaaacgtctctcttcaaacaaaaagccaattcagctt
tga
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