Geospiza fortis (medium ground-finch): 102038465
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Entry
102038465 CDS
T03755
Symbol
SDC3
Name
(RefSeq) syndecan 3
KO
K16337
syndecan 3
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04514
Cell adhesion molecule (CAM) interaction
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102038465 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102038465 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gfr00535
]
102038465 (SDC3)
Proteoglycans [BR:
gfr00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102038465 (SDC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
TGF_beta_GS
ECF_trnsprt
SDH8
SCY_4732_
Motif
Other DBs
NCBI-GeneID:
102038465
NCBI-ProteinID:
XP_005426978
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All DBs
Position
Un
AA seq
278 aa
AA seq
DB search
MGGAGAAHLSLWSQAQRWRNENYERPVDLEGSGDDDPFGEDELDDIYSGSGSGLPPLATK
AATTRSTTLETPTTPVPETSTPTEVVTSRPVPTSTARPRALPKPSTSRTAELPEKSTALP
PTATTLPPTEAPQMEPGEVTTAPDKEPEEPASSGPSGDFEIREEEETTRPDIGNEVVAVV
TPPAGPGPGRNVETGLMDNTIDSGNSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLV
MLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFYA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggctggagccgctcacttgtccctctggtcacaggctcagcgctggcgcaat
gagaactacgagcggcccgtggacctggagggctccggggacgacgacccctttggagag
gatgagctggacgacatctactccggctctggctcagggttgccccccttggccaccaag
gcggccaccacccggtccaccaccctggagacccccaccacgcccgtccccgaaaccagc
acgccgacagaggtggtcacgtcacgccctgtccccaccagcacggccaggcccagggcc
ctgccaaagcccagcacctcgaggactgcagagctccccgagaaaagcacggccttgccg
cccacggccaccacgctgccgcccacagaggctccccagatggagccaggggaggtgaca
acagcccccgacaaggagccagaggagccagccagcagtggccccagcggggacttcgag
atccgggaggaggaggagacgactcgtcccgacatcgggaatgaggtggtggctgtggtg
acaccgccagcagggccggggcctggcaggaacgtggagacggggctgatggacaacacg
atagactcgggcaactcggccgctcagctgccccagaaaaacatcctggagaggaaagag
gtgttgatagcggtgatcgtgggtggcgtggtgggcgcccttttcgccgccttcctggtg
atgctgctcatctaccgcatgaagaagaaggacgagggcagctacaccctggaggagccc
aagcaggccaacgtcacctaccagaagcccgacaagcaggaggagttctacgcgtag
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