KEGG   Geospiza fortis (medium ground-finch): 102038468
Entry
102038468         CDS       T03755                                 
Symbol
THOC5
Name
(RefSeq) THO complex 5
  KO
K13174  THO complex subunit 5
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03013  Nucleocytoplasmic transport
gfr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102038468 (THOC5)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102038468 (THOC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gfr03019]
    102038468 (THOC5)
   03041 Spliceosome [BR:gfr03041]
    102038468 (THOC5)
Messenger RNA biogenesis [BR:gfr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102038468 (THOC5)
Spliceosome [BR:gfr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102038468 (THOC5)
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 102038468
NCBI-ProteinID: XP_005427642
UniProt: A0A6I9HPM7
LinkDB
Position
Un
AA seq 683 aa
MSSESSKKRKPKVIRTDGVPAEGKRGKGDTEQDARYYSEESEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKENASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYKEAPPEISRPAITL
NEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTLDLKCKDENVL
HLTFHYLMNLNVMTVKAKVTTAMEMTTAISAGDLLSPDSLLNCLYPGDHGRKTPNPANQF
QFDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVAADNSLSASHMELTVKLLR
SRLQSRLALHKQFASLEHGVVPVSSECQQLFPTKIVSRLVKWTAIPYEDYAELPYTKDVI
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPVFSLCLNWKGERNSSNDDNIRA
MESEVNVYYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDPSVEGPKEFPQEKMCLR
LVRGPLRLKPFKFNYPQGFFSHR
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgtcctccgagtccagcaagaagaggaagcccaaggtgatccgcacggacggggtccca
gccgagggcaagcggggcaagggcgacacggagcaggatgccaggtactacagcgaggag
agcgaggtggatctgcgggaccccatcaaggactacgagctctacagggagacctgccag
gagctccagaggctcatggcagagatccaggagctgaagagccggggcatcaaggaaaat
gcctcggagatcgacgagcggcgcgtgcagagctgcgtgcacttcatgaccctgaagaag
ctcaaccgcctggcccacatccggctgaagaagggcagggaccagacccacgaggcaaag
cagaaggttgatgcctatcacctgcagctccagaacctactctatgaggtgatgcacctg
cagaaagagatcaccaagtgcctggaattcaaatccaaacatgaggagatcgagctggtg
agcctggaggagttctacaaagaggccccccctgagatcagccgccctgccatcacccta
aatgagccccaccagcagaccctggcccgcctggactgggagctggagcagcgcaagagg
ctggcagagaaatacaaggagtgcctgaccagcaaggagaagatcctgaaggagattgag
gtgaagaaggaatatctgagcagcctccagcctcgactcaacagcatcatgcaggcctcc
ctgcctgtgcaggagtacctgttcatgcccttcgaccaggctcacaagcagtacgagacc
gcccggcacctcccgccgcctctctacgtcctcttcgtccaagccagtgcctatggacag
gcctgtgataagaagctggtggtggccattgaagggagtgtggaggaagccaaggccctt
tataaaccacctgaggactcacaggatgatgagagcgattctgacgcagaggaggagcaa
accacgaagcggcgcaggcccaccctgggtgtgcagctggacgacaaacgcaaggagatg
ctgaagagacaccccttgtctgtcaccctggacctgaagtgcaaagatgagaacgtgctt
cacctgaccttccactacctgatgaacctcaatgtcatgacagtgaaagccaaggtgacc
actgccatggagatgaccacggccatcagtgctggggacctgctctccccagactccctc
ctcaactgcctctatccaggggaccacgggaggaaaacacccaacccagccaaccagttc
cagttcgataaagtgggcatcctgaccctgagtgactacgtgacagagctgggacacccc
tacgtgtgggtgcagaagctgggtggcctgcatttccccaaggatcagcctcagcacacg
gtggctgctgacaattccctgagtgccagccacatggagctgacagtgaagctgctccgg
agccgcctgcagtcccgcctggccctgcacaagcaatttgcatcccttgagcacggcgtt
gtgccagtgtccagcgagtgccagcagctcttcccaaccaaaatcgtctcccgcctggtg
aagtggactgccattccctatgaggattatgctgagctgccctacactaaggatgtgata
gaggctggcttggctgaagacactcacctctactacatggccctgatagagaggggaaca
gccaagctccaggcagctgtggtgctgaaccctggttattccacgctgcctcctgtcttc
agcctgtgcctgaactggaagggagagaggaacagcagcaacgacgacaacattcgggcc
atggagagcgaggtcaatgtctactacaaggagctgtgggggcccaaacccggctaccag
ctgctcaccaaccagctgcagcgcctgtgcatggtgctggacgtgtacctggagacagag
ccccacgatcccagcgtggaggggcccaaggaattcccccaggagaagatgtgtctgcgt
ctggtcaggggtcccctgcgcctgaaacccttcaagttcaactacccccagggcttcttc
agccatcgctga

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