Geospiza fortis (medium ground-finch): 102038697
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Entry
102038697 CDS
T03755
Symbol
DDX25
Name
(RefSeq) DEAD-box helicase 25
KO
K18656
ATP-dependent RNA helicase DDX25 [EC:
5.6.2.7
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102038697 (DDX25)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102038697 (DDX25)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102038697 (DDX25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
P-loop_SecA
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
102038697
NCBI-ProteinID:
XP_005429400
UniProt:
A0A6I9HT83
LinkDB
All DBs
Position
Un
AA seq
418 aa
AA seq
DB search
MNKLIHTSLVESQQHVEILQRDPSSPLFSIKTFEELPLKKELLQGVYMMGFNRPSKIQEQ
ALPLMLAYPPQNLIAQSQSGTGKTAAFVLAMLSRASASEKYPQCLCLAPTYELALQIGQV
VRAIGKFCTDIKVNYAVRGNRVLKGTVLEEQIIIGTPGTTLDWCFKQRILDLTKISLFVL
DEADIMIDTQGLSCQSIRIHRALPKSCQVLLFSATYKEPVRAFAERIIPDPIVIKLREEE
LTLSNIRQYFMVCQSSDEQYRALCNLYGSFTIGQVMIFCQTRRLADWLSAKMSRDGHQVA
ILTAELTVVQRASVIQRFREGKEKVLIATNVCARGIDVQQVTTVVNFGLPMDQDGEPDFE
TYLHRIGRAGRFGHRGIAFSVVQRETVRLVHKIEEYFQTTIKQLDPYDMDELEKLAAE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagttgatccacacgtccctggtggagtcccagcagcacgtggagatcctgcag
cgagaccccagctccccactcttttccatcaagacctttgaggagctgcccctgaagaag
gagctcctgcagggcgtttatatgatgggcttcaacagaccatccaaaatccaggagcag
gctctgcccctcatgctggcatacccgccccaaaatctgattgcccagagccagtcaggg
acagggaaaacagcagcttttgtcttggccatgttgagcagagccagtgccagcgagaaa
tatccgcagtgcctgtgcctggctcccacctacgagctggccctgcagatcgggcaggtg
gtgcgcgccattgggaagttctgcacggacatcaaggtgaactacgctgtccggggaaac
cgagttctgaagggcacagtgctggaggagcagatcatcattggaacaccaggcaccacc
ctggactggtgcttcaagcaacgcatcctggacctgacaaagatctccttgttcgtgctg
gatgaggctgacatcatgatcgacacgcagggcctctcctgtcagagcatccgcatccac
agggctcttcccaagagctgccaagtgctgctgttctcagccacttacaaggagcccgtg
cgggcctttgcggagaggatcatccccgaccccatcgtgatcaagctgcgtgaggaggag
ctcaccctgagcaacatcaggcagtacttcatggtgtgccagagctcagatgagcagtac
agggccctctgcaacctctatggcagcttcaccatcggtcaggtcatgatcttctgccag
acccggaggctggcagactggctgtcggcgaagatgagccgggacgggcaccaagtggcc
atcctgacagcagagctgacggtggtgcagcgggccagcgtcatccagcgcttccgtgag
ggcaaggagaaggtcctgatcgccaccaacgtctgtgccagaggcattgatgtgcagcag
gtgaccacggtggtgaactttgggctgcccatggatcaggacggcgagccggattttgag
acctacctgcaccgcattgggagggcagggcgcttcgggcaccgcggcatcgccttcagc
gtggtgcagagagagaccgtgcgcctcgtgcacaagattgaggagtatttccagaccacg
atcaagcagctggatccgtacgacatggacgagctggagaagcttgcagctgagtga
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