Geospiza fortis (medium ground-finch): 102038739
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Entry
102038739 CDS
T03755
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102038739 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102038739 (CSTF2)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102038739 (CSTF2)
U7-dependent histone pre-mRNA processing factors
102038739 (CSTF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
DUF8400
RRM_occluded
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
102038739
NCBI-ProteinID:
XP_014163406
LinkDB
All DBs
Position
Un
AA seq
582 aa
AA seq
DB search
MHLVTSKVYLEDPVQTGKGARTGGGRRGAVGNIPYEATEEQLKDIFSEVGPVVSFRLVYD
RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPI
IESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAY
ALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQ
NTPSSQPQAIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGNLQLSPVG
PARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRG
YLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPR
GLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQ
GPGPLNMGASGPQGPRQGHTVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDH
EKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcacttggtcacgtcgaaggtgtacctggaagacccggtccagacggggaaaggggcg
cggacgggcgggggcaggcggggggccgtggggaacatcccgtatgaggccacggaggaa
cagctgaaggacattttctcggaggttgggcccgtggtcagctttaggctggtgtacgac
agggagacgggcaagcccaagggctatggcttctgcgagtaccaggaccaggagacggcg
ctcagcgccatgcgcaacctcaacgggcgcgagttcagcggcagggccctgcgcgtggac
aacgccgccagcgagaagaacaaggaggagctcaagagcttgggcacaggtgcacccatc
atagagtcaccctatggggaccctgtcaacccagaggacgcccccgagtccatcagccgg
gctgtggccagcctgccccccgagcagatgtttgagctgatgaagcagatgaagctgtgt
gtccagaacagcccccaggaagccaggaacatgctgctccagaacccccagctggcttat
gcactgctgcaggcccaggtggtcatgaggatcgttgacccggagatcgcgctgaaaatc
ctgcaccgccagaccagtgttcctcctctgatcccaggcaaccagcaggcagtgccaggc
ccggggcctgggccaggaccagggcctgggccagggcccaacgcacagctgaacccccag
aacaccccatcatcccagccacaggccataggcgggatgcacgtcaacggcgctcctcct
ctgatgcagccacccatgcaggggggagtgcctgccccaggacagatggcagcccctgtg
cagggcccaggccctggccccatggctccaggagggaacctgcagctctcgcccgtggga
cctgccaggcctgcgtctatcgaacgcgttcaagtgcccatgccagacccgagggcccct
atgcagcgtggacctctacctgctagtggcccgccaccccgaggccttttgggagatgcc
ccgaatgaccctcgcggagggaccctgctctcagtcactggagaagtggagcccagaggt
taccttgggccgccccaccagggagcccctatgcaccatatgcctggtcatgacagccgt
ggccccccccatgagatgagggggggacccatgggagaaccccgaccactgatgggagag
ccgcgggggcccttgatggatgctcgagtcggaagagatccccgggggctggagccgcga
gggctggagccgcgcgtgatggaggcgcgggcgctggaggcgcgaggcctggagccgcgg
gtgctggagccacgagtgctggaagccagggccatggaggccagggtcctggagccccgg
ggcctggagccccgagggcctggtcccaacccgcgtggcccgatgcctggtgggatacag
ggtcctgggccacttaacatgggagccagtggcccgcaggggccccgccagggacacacg
gttcctaacatggctggggcaggcatgcagggaggaggcatacctggggcaggagtccaa
ggagctggtcagcctggaggctttagccctggacagagccaggtcaccccccaggatcac
gagaaggcagcactgatcatgcaggtcctgcagctgacagcagaccagatcgccatgctg
cccccagaacagcggcagagcatcctcattctgaaggagcaaatccagaaatccacaggg
gcaccctga
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