Geospiza fortis (medium ground-finch): 102038794
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Entry
102038794 CDS
T03755
Name
(RefSeq) polyketide synthase-nonribosomal peptide synthetase-like
Organism
gfr
Geospiza fortis (medium ground-finch)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PP-binding
adh_short
CurL-like_PKS_C
PKS_DH_N
adh_short_C2
ADH_N
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
102038794
NCBI-ProteinID:
XP_005423957
UniProt:
A0A6I9HKW6
LinkDB
All DBs
Position
Un
AA seq
1787 aa
AA seq
DB search
MEIETADEVAIVGIGCNFPGGDGIDNFWKVLEEGKNCTVEIPPERFNTKEWYDADGNKPG
KICTTRAALLDEFNSFDNHLFGINNMEAERMDPQQKLLMECTYKALEDAGVPVESISGSK
TGVFIGLMNRDYEIMASRAVNEINHYDGTGTAMSIAANRVSFTFNLTGPSLTVDTACSSF
LFALHYALRAIKSGDCEAAICGGVNCIMHPRTFVSLTKAKMISPEGISKPFSKKADGYGR
GEGCGVVFLKPLKKAKEDYSKIWGVINISAVNQNGRSITPITRPSQIEQEKLLRSIYGSR
VDPSVVQYIEAHGTGTAAGDPTEAESLGSVISKNRSSRVSILKIGSVKGNIGHTESAAGA
AGLIKVLLMMHHGKIVPSLHYSKEMSSIDTEKLNLAVATAVEPWEESSEYGRVAGINCFG
FGGTNAHVVVRQVRQPEPLPAFKKPLELVLLSAASPKSLQMTMADTAEQLSARNSVTLPS
LAYTSACRRSHASYRYRKAFVTNSLQHLQQELRLTLFTLVGNLFELGFNPNWQHFYDGYQ
SVPVAIPRYRFDRQKLMNCLDTHQQASRRGVSVSHSLIYSINSDNLEFGCLVSQETTPYL
YEHKNNGVALVPGAFYVELGLASVMSSSEPKVPLSTCQLSISFSAPCVLAQNSQVLSIKL
SPQKAMTTFEVLSSSNAVYAAGQVAKGLEGVVEESSISCQAIYRRCKSVISREELYEALS
QVGFQYGSIFRQLSDVHYCQELKEAITSIKVNEETARDMYSYCIHPVLLDCFLQMTAVLT
SRTVHSRAGFPSGIGSLVVLRPLQEEMMIYMRMSKSTGNCLEVCGCFVDKHGSVLAELKR
VAITFMKESSSRDNEFLFQNKWKEVSLSQTIGHLGFKPRVLVFADKFGIAEQLKKYLHPA
SRYVMFEGWDCLVEGDAQNKMREEVKDYDEILFLWGIQKLNEDSPRKAVDQLAKCCEAYR
QVVVALREKRTCCSVRVITYRTTERYVDHINCGFALYGMTRACIVEFPEITFQLIDLSSS
TSLDISVLADVLIKYKGGDYPEVCISQGRIYVSEIRRTPFVDADYIQPIRSLQKSQSFTL
HTSDPYTAKDLSGELSTGTATQLDKQSVEIQVDKICLHSEDYFPISVSSCNFGNTLYWNS
QAGDKHRLLALDFSGTVTATGSDVKKVKVGDHVVSCYPTAASSRVQIPGTVCFNARKFPF
LQNVPCVSYFIIAWEIFTQKLPKGKHGRTLGIITTEPSSVLCHVLSAAAEETGWRTVLAK
PTPNVLQYINLCSALVILPPVNRLSQEDLAHMSFLKDVVIVCGSQQSDCIQNVSEIDHEN
VSFHILAIARLFRKAPLKEVQKTLHAWISSMDMKWFRNLSGSVFQQTENFEGLNSVMSYF
TCTSVPLAVLRRQKDISVLSDIPLYEPQKQLFKQNAVYVVAGGLTGLGFETVKFIAENGG
GCIAILSRRIPSSEKREELRALQQQYKGSKVVSVQCDVTSSSDVEKAFQSIATTFMGRPI
KGVFQSAVALHDGHLEVLKLADFHKVLSPKVAGTLNLHWATRDQELDYFVCYSSVASFLG
NATQTNYAAANSFLDLFCLYRRNCGLSGQAINWGALNLGILLNQDLIQSILESKGVDILQ
VHEIHDYLRKTLLINNPQQTVAKLNFHTLYHHVFRQIISLKSRFMTLMSEDFMNKIETSE
EAEVPETAFLKSEDYITSLMSDLTGVNADELTMNTALSSLGMDSMLAMTIQNRVFRERKV
DIPVVKLLDPHTTLSSLVAVFEETSDADGTVEKKNAVVESAENGSRL
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggagattgagactgcagatgaagttgctattgttggaataggatgcaactttcctgga
ggagatggaattgacaatttctggaaagtcctggaggaaggcaaaaactgcactgtagaa
atcccccctgagaggtttaataccaaggagtggtatgatgcagatggtaacaagccagga
aaaatatgtacaacacgagctgctcttctggatgagtttaattcatttgacaaccacctg
tttgggattaataatatggaagcagaacgcatggatccacaacagaaattactgatggag
tgcacatacaaagccctggaggatgcaggagtccctgtggaatctatcagtggttccaaa
acaggtgtttttattggtctcatgaatcgagactatgaaatcatggccagtagagctgtg
aatgaaataaatcattatgatggtactggaacagcaatgagcattgctgccaacagggtc
tctttcacatttaatctgactggaccatctctgactgtcgacactgcgtgttcatctttt
ctttttgctctgcactacgccttgcgagccattaaatcaggagactgtgaggcagcaatc
tgtggtggggtgaactgcatcatgcacccccgcacctttgtatctctcactaaagccaaa
atgatctctccagagggcataagcaaacccttctccaaaaaagcagatggctatggaagg
ggagaaggctgtggtgttgttttcctcaaaccactgaaaaaggcaaaggaagactacagc
aaaatctggggtgtgataaacatcagtgcagtcaatcagaatggcaggtccataactcca
atcacgaggccgtctcaaatagagcaagagaagttactgcgcagcatttatggaagtcgt
gttgatccctcagttgtgcagtacattgaagcccatggcacaggaactgctgctggagat
cctacagaagctgagagcctgggtagtgtcattagcaaaaacaggtcttcccgagtttcc
attctgaaaatcggttcagtgaaaggaaatattggacacactgaatcagctgctggagca
gctgggttaatcaaagtgctcctgatgatgcatcatggaaagattgttccatccttgcat
tactcaaaggagatgagcagcatcgatacagagaaattaaaccttgctgttgccacagct
gtagagccctgggaagaatccagtgagtatggaagagtagctggcatcaactgctttgga
tttggaggaaccaatgctcatgttgtagtcaggcaggtgaggcagccagagcctcttcct
gcctttaagaagcccctggaattagttctgctgtcagcagcatcccctaagtcccttcag
atgacaatggctgacacagctgagcagctgagcgcaaggaactccgtaactctcccgagc
ctggcctatacctctgcctgcagaagaagccacgccagctacaggtaccgaaaagcattt
gtcacaaattccctccaacacttgcagcaagagctgaggctgacgctcttcaccctggta
ggaaatctgtttgaactgggatttaatcccaactggcagcacttttatgacgggtatcaa
agtgttcctgtggccattccacgatatcgatttgatcgccaaaaactcatgaactgtctg
gatacccatcaacaagcaagccgaagaggtgtcagcgtcagtcattctttgatttacagt
ataaacagtgacaacttggagtttggctgcctggtgtcccaggaaacgacaccgtactta
tatgagcacaagaacaacggagtggccttagtccctggtgctttctatgtggagcttggt
ctggcctctgtgatgagcagctcagaacccaaagtgcctctgagcacttgccagctgagt
atcagtttttctgcaccgtgtgttcttgcacagaattcccaagtgctgagtatcaagctg
agtccacaaaaagccatgacaacctttgaggttctctcttcctccaacgcagtttatgct
gctggccaagtggccaagggccttgaaggtgtggtggaagaaagcagcatctcttgccaa
gccatctatcgaagatgcaagtcagtgattagcagagaggaactttatgaagcactgtct
caggttggctttcagtatggctccatattcaggcagctcagtgatgtgcattattgccag
gagctaaaggaagctataacaagcataaaggtgaatgaggagaccgccagagacatgtac
agctactgtatccacccagtgctgctcgactgctttctgcagatgaccgctgtcctgacc
tcaaggacagtccactccagagcaggttttccttctgggataggcagcctggtggtgctc
cgcccactgcaggaggaaatgatgatatacatgagaatgagcaaatccacggggaactgc
cttgaggtctgtgggtgctttgtggacaagcacggctctgttttggctgagctcaagcgc
gttgccatcactttcatgaaggaatcgtcttccagagacaatgagtttctgtttcaaaac
aaatggaaagaagtctctctttcacagacaattggacatctggggtttaagcccagagtc
cttgtgtttgcagacaaatttgggatagctgagcagctcaaaaaatacttgcatcctgct
tcgagatatgttatgtttgaaggctgggattgcctcgtggaaggtgatgcacagaacaaa
atgagagaagaggttaaggattatgatgaaattctcttcctgtggggaattcaaaagtta
aatgaagattccccaaggaaagcagtagatcagttggcaaagtgctgcgaagcctatcgc
caggtagtggtggcactaagagagaagaggacttgctgctccgtcagagtgatcacctac
agaacaacagagagatatgtggaccacattaactgtgggtttgcattgtatggcatgacc
agagcctgtattgttgaatttccagaaatcacatttcagttgattgacctcagctcctcc
acttccctggacatctcagtgttagcagatgttcttatcaagtacaaaggtggggactat
ccagaagtctgcatcagccagggaagaatttacgtttccgaaatcagacgcacacctttt
gtagatgcagattatatccaacccataagatcactccagaaatcacaatcattcactttg
cacacttctgatccatacacagcaaaagacttgtctggggaattatccactggcactgca
actcagcttgacaaacaaagtgtagaaattcaagtggataaaatttgtttgcactcagaa
gattattttcccattagtgtttctagctgcaactttggtaatacactgtattggaactcc
caggcaggggacaaacacaggcttctagctcttgatttcagtggcacagtcactgcaaca
ggcagtgatgtgaaaaaagtgaaagtgggagatcacgtggtttcatgttatcccactgct
gcatcatccagagttcagattccaggaacagtttgtttcaatgcaaggaaattcccattc
ctccagaatgtcccttgtgtgtcatacttcatcattgcatgggaaatcttcactcagaag
ttacccaaaggaaaacatggcagaacattgggtattattactacagagccatcctcagtt
ctgtgccacgtcctttctgcagcagcagaagagacgggttggagaacagtccttgcaaag
cccactcctaacgtgttgcagtatatcaacctgtgcagtgcccttgttattcttcctcca
gtcaacagactgtctcaggaggacctggcccacatgtcctttcttaaagatgtggtgatc
gtgtgtggcagtcaacagtcagattgcatccagaatgtcagtgaaattgatcatgaaaac
gtcagctttcatatccttgccattgcccgccttttccggaaagcacctctaaaggaagtg
cagaagaccctacatgcctggatcagttccatggatatgaaatggtttagaaatctctca
ggttctgtttttcagcagactgagaactttgaagggctaaattctgtgatgtcctatttc
acctgcacttctgtcccccttgctgtcctgagaaggcaaaaggacatcagtgtgctttca
gatatcccattgtacgagccccagaagcagctgttcaagcagaatgctgtttatgtagta
gctggggggctcactggacttggctttgaaacagtgaaattcatagctgagaacggggga
gggtgtattgcaattctgtccaggagaattcccagcagtgagaagcgagaagagttaagg
gctttgcagcagcagtacaaagggagcaaagtagtgtctgtgcagtgtgatgtgacttcg
agcagtgatgttgagaaagctttccagtccattgccaccacctttatggggcgtccgatc
aaaggggtgttccaaagtgctgttgctttacacgacggccaccttgaagtgctgaagctg
gctgacttccacaaagtgctgagcccaaaagtagcagggaccctaaatctacactgggct
accagagaccaggagcttgactactttgtgtgctactcctctgttgcttcctttctgggc
aatgccacccagacaaactatgcagctgcaaactctttcctggatctcttctgcctctac
aggaggaactgtgggctctcaggccaggccattaactggggtgctttgaacctcggcatt
ctgctcaaccaagacctcattcagagcattctggaatccaagggcgtagacattctgcaa
gttcatgaaattcatgactatctcaggaagaccttacttataaacaatccgcagcaaact
gttgccaaattgaactttcacactttgtatcatcatgtttttcgtcagattatttccctc
aaaagtcgcttcatgacacttatgtcagaagatttcatgaacaagattgaaacgtctgag
gaagctgaagtcccagagactgcctttctcaaatctgaggattacatcacctcactgatg
agtgacctcacaggagtgaacgcagatgaactaaccatgaatacggcactttcgtctttg
ggcatggactctatgttagccatgacaattcagaaccgtgtctttcgggagagaaaggtg
gacatacctgtagtgaaactgcttgatcctcacacaactctgtcaagtttagtggcggtg
ttcgaagaaacaagcgatgcagacggaacagtcgaaaagaagaatgctgtggttgaaagt
gcagaaaatgggagcaggctatag
DBGET
integrated database retrieval system
