Geospiza fortis (medium ground-finch): 102038818
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Entry
102038818 CDS
T03755
Symbol
OBSL1
Name
(RefSeq) obscurin like 1
KO
K19574
obscurin-like protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102038818 (OBSL1)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
102038818 (OBSL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Izumo-Ig
C2-set_2
Ig_C17orf99
DUF4945
Motif
Other DBs
NCBI-GeneID:
102038818
NCBI-ProteinID:
XP_014162018
LinkDB
All DBs
Position
Un
AA seq
2205 aa
AA seq
DB search
MEGFGGAPRFLAYPRAFTVQSGTDAVLSCQIMGDPQPSILWEKDKNAIEPSGRFHMESKG
DLYSLLVSCATPKDSGLYVCRAKNSVGETYAATMLRVEPAERREEEGCSGSVAPAFLIAP
SSMRVCRGEDVMFTCRVSGQPCPVLEWEKDGHKLSELFESSHFAVGQKPEDWHFLKLFSA
RPQDGGVYVCRARSGSQEALAAAVLLVEPQALPDGLPNGCPADGPEALAERQRWRRHGAG
RRMASETWVPNGVVPARVPGAKAFAVSAGKHAKFRCYVTGKPKPEIIWQKDGEPLAPGRR
HLIYEDREGYFILKVLYCKPQDQGLYMCTASNTAGQTLSAVQLQVKEHRLRFQVQLADVE
VAEREDAVLECQVPLETIPTSWYLEDRELQPSHKYVMEEQGVVRRLTIRDARIDDDGIYL
CQMKDKGRSIAEVSVRGVIAKRLPRKLDVMEGENAVFCVETRDVVEGSCWSRDALQLRES
PRTVLKSFGRTHLLVLVHVTRQDAGIISFTVGESQTSSQLRVKCVKHDPPSAPVAAEMSV
VETNTALLTWCPAPDSHLRPASHYLLERREAAGGDWVQCLATDLPSCVRVLGDSVPREAD
YCFRISAANKHGRSSPVEFPGSVHLAPAARLERGLQDSWVRDGEDAQFSLELSAAVHGSW
FLNGVRLAEEEEAGGRCSVQRRGTEHLLLIRGARLVDSGAQVTFVSGDVRDSAILHVQAP
QVLIGPVSEAERLRKVPAGMPVLLECQVSSPDAPVCWLKDGKAVPLDDVIAVQAEGCVRR
LLLRSACPSDTGVYTCDTGDDAVSFVVTVTEVPVRIISSNEEAPHTYMAGQRVELWCQLS
RPAAPVRWYKDGEEVEVGESLVLEQEGPRCKLVLPCAQTQDTGEFVCDAGGDSAFYTITV
AEEPVRIVSSNEGASHAYMAGQRVELWCQLSRLAAPVRWYKDGEEVEAGESLVLEQEGLQ
CLLVLPCAQPQDTGEFVCDAGGDSVFYTVTVAEVPVRIVSSNKEASHSYVVGQRVELWCQ
LSRPVSPVRWYKDGEEVEVGESLVLEQEGLQYRLVLPCARTQDTGEFLCNASDASVSYSI
LVAEPPVRILQPPQRSLELLVQAPGCVELRCQLSMPDAPVHWFKDGLEVDETDNLQLLVE
GAWHCLFIPKSSAEDAGEYICETKDEAVSFDVKVSEPPVRILQPCRPVPVMTVSPGETVT
LCCELSRADTPVCWAKEGVRLEAGGGLVLEEEGVHRRLLIPAAQAEHSGKYTCDTASDTV
TFTIQVLDPLVRILEKDVLPTHRRCQAMEDLVLEVQLSHTHGEVKWYKDGEKLQDTGRVR
LEEDGVRRSLVILGATGKDAGEYLCDTGDDSIVFFITVEARPVCIVNKEEAQSPLEVQEG
DSVTLVARLSPETAAVQWQKEGQTLCSGGRLLVCSEGPTRSLTIKQAELGDGGIFLCDAG
DDEVHFTLHVKEAPVLFVNKREEQEKLLVLEGGSAVLSAITSTERSDVTWLGPRQAAVAG
ERCELRRDGRVHSLIIHNVAMEDAGTYTCLSPHDQMQFDVNVRELRVKFLRGLADVRARQ
GERVVLWCELCKARGDVVWRKDGRVLAPGPRRQMTAEGRERSLVLSRVEPGDAGEYCCES
NDDQTLATLTVQVPRVVEIIMELQNLTVLEGEDATFKCLVSPEDVAVTWQLNGQPVVPNE
RLLMTRSGLCHSLTLRQCQTGDAGTVTATAEGLVSTARLSVQEAQVLFVRKLQDMVAEEQ
GDVCLEVEVSHEAAEVQWLKQGILLQPGSKYQLQESGCRRTLTICCLGPADRGTYRCESL
HDRTQAKLHVEPRKVSIRTPLRDVETFEKETATFHLELSHPGVTGVWTRDGIRVKPSSTC
RISATGCGHSLTLERLALEDSGTVTFTADTLRCSAHLRVREPPVTMVRVPRDLGVPETGV
ASFECELSRPNAEVKWFKDGQELRPGPNCRIYSAGRRRILQLSRCELTDTGSYTCDAGDC
QASAVLHVQGTERQVHIVQELQDVQVREGDNAVFTCEVSHGDVKGEWFRDGEKIKVSSTV
KIRHEGTRHFLLFCGVRPEDKGLIRFTARTVTSEASLQVEALPIRIVKPLRDKTVLARHK
ATLECTVSHARGRVRWLRGDTEIFAGDKYEICNLDCYRTLIIHRVGPEDEDSYTCDAFDD
RSTARLLVEGEWAPRGAPLAAAVLLCLAVEGHQNPCPCPLLLARV
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttcgggggagcccccaggttcctggcctatccacgcgccttcacggtccaa
agtggcactgatgctgtcctgagctgccagatcatgggtgatccccagccaagcatcctc
tgggaaaaggacaagaatgccatcgagccctcaggccgtttccatatggagtccaaaggg
gacctgtacagcctgctggtgtcctgtgccacccccaaggacagtggactctacgtctgc
agggccaagaatagcgttggcgagacttatgctgccaccatgctcagggtggagccagcg
gagcggcgagaggaggagggatgctcaggcagtgtcgcacctgccttcctcattgccccc
tcatccatgcgggtgtgccggggggaggatgtgatgttcacctgcagggtgtctgggcag
ccctgccctgtgctggagtgggagaaggacgggcacaagctctccgaactctttgagagc
agccactttgcagtggggcagaaaccagaggactggcacttcctgaagctattcagcgcc
cggccccaggatgggggagtgtatgtctgccgggcacgcagcggctcccaggaggccctg
gctgctgccgtgctcctggttgagccccaggcactgccggacgggctccccaatggctgc
cctgccgatggtcccgaggcactggcggagcggcagcggtggcggcggcacggagcggga
cggcgcatggcatcggagacctgggtgcccaatggcgtagtgccggccagggtgccaggg
gccaaggcatttgccgtgagcgcagggaagcacgccaagtttcgctgttacgttactggc
aagcccaagccagagatcatctggcagaaagatggtgaacccctcgcccccggccgcagg
catctcatctacgaggaccgggagggctacttcatcctcaaggtgctgtactgcaaacct
caggaccaggggctgtacatgtgcaccgcttccaacactgctggccagaccctcagcgca
gtgcagctccaggtgaaagagcaccggctgcggttccaggtgcagctggcagatgtggag
gtagcagagcgggaggatgcagtgctggagtgtcaggtgccattggagaccatccccacc
tcctggtacctggaggacagggagctgcagcccagccacaagtatgtgatggaggagcag
ggggtggtgcggcgcctgaccatccgcgatgcccgcatcgatgacgacggcatctacctc
tgccagatgaaggacaaaggacgcagcatcgccgaggtctctgtccgaggggtgattgcg
aagcggctgccacggaagctggatgtgatggagggggagaatgcagttttctgtgtggag
acacgggatgtggtggagggcagctgctggagccgggacgcgctgcagctgcgggagtca
ccccgtacggtgctcaagagcttcggcaggacacacctcctggtgctggtgcacgtcacc
cgccaggatgcgggcatcatctccttcactgtcggggagtcgcagacatcctcccagctc
cgagtcaagtgtgtgaagcacgaccctccgagcgcaccggtggcagctgagatgagcgtg
gtggagactaacacggctctgctgacttggtgtcccgcgcctgactcccacctccgcccc
gccagccactacctgctggagcgtcgggaggcagcgggaggggactgggtgcagtgcctt
gccaccgacctgcccagctgtgtgcgggtgctgggtgacagcgtgccccgcgaggccgac
tactgcttccgcatctctgccgccaacaagcacggcaggagcagccccgtggagttccct
ggatctgtgcatcttgccccagcagctcgtctggagaggggtctgcaggattcatgggtg
agggatggtgaggatgcacagttctccctggagctgtcagctgcggtgcatgggtcctgg
ttcctcaacggcgtcaggctggctgaggaggaggaggcaggcggccggtgcagtgtacag
cgccgtgggacggagcacttgctgctgatccgaggagcacgactggttgacagtggggcc
caggtcacctttgtgtccggtgatgtgcgggactcagctatcctgcatgtgcaagcccca
caggtcctcattggcccagtgtctgaggctgaacggctccgaaaagtaccagcagggatg
cctgtgctgctggaatgccaggtgtccagcccggatgcccctgtctgctggctgaaggat
ggcaaggctgtgcccctggatgatgttatcgcagtgcaggcagaaggctgcgtgcggagg
ctgctgctccgctcagcatgtccctcagacactggggtgtacacctgtgacactggggat
gacgccgtgagctttgtggtgacagtgaccgaggtgccggtgaggatcatcagctccaac
gaggaagccccccacacctacatggccggacagcgtgtggagctgtggtgccagctgtcc
cgcccagcagcccccgtgcgctggtacaaggatggagaggaggtggaggtgggcgagagc
ctggtgctggagcaggaggggccacggtgcaagctggtgctgccctgcgctcagacacag
gacacgggggagttcgtctgtgatgctggtggggactctgccttctacaccatcactgtg
gcagaggagccggtgaggattgtcagctccaacgagggggcctcccacgcctacatggcc
ggacagcgtgtggagctgtggtgccagctgtcccgcctggcagcccccgtgcgctggtac
aaggacggggaggaggtggaggcaggtgagagcctggtgctggagcaggaggggctgcag
tgcctgctggtgctgccctgtgcccagccacaggacacaggggaattcgtctgtgacgct
ggtggggactctgtcttctacacagtcaccgtggcagaggtaccagtgaggattgtcagt
tccaacaaggaggcctctcactcctacgtggtcgggcagcgtgtggagctgtggtgccag
ctgtcccgcccagtgtccccagtgcgctggtacaaggatggcgaagaagtggaggtgggc
gagagcctggtgctggagcaggaagggctgcagtaccgcctggtgctgccctgtgcccgg
acacaggacacaggggagttcctctgcaatgccagcgatgcatctgtctcctactccatc
ttggtggcagagccaccagtgaggatcctgcagcctccacagcgctcactggagctgctg
gttcaggcaccggggtgtgtggaactgcggtgccagctctccatgccagatgctccggtg
cactggttcaaggatgggttggaggtggatgagactgataacctgcagctgctggtcgag
ggggcctggcactgcctcttcatccccaagagcagtgcagaggatgcaggcgagtacatc
tgcgagaccaaggatgaggctgtctccttcgatgtcaaggtgtcagagcctccggtgagg
atcctgcagccctgcagacctgtccctgtcatgacggtgtccccgggggagacggtgaca
ctgtgctgtgagctgtcccgtgcggatacacccgtgtgctgggcaaaggagggtgtcagg
ctcgaggctgggggcggcctggtcctggaggaggagggtgtccatcgccggctgctcatc
cccgctgcccaagctgagcactctggaaaatacacctgtgacactgccagtgacacggtg
actttcaccatccaagtgttggatccgctggtcaggatcctggagaaggatgtcctgccg
acccaccggcgttgccaggccatggaggacctggtgctggaagtgcagctctcacatacc
catggggaagtgaagtggtacaaggacggggagaagctgcaggacacggggcgtgtgcgg
ctggaggaggacggggtgcgccgatcccttgtgatcctgggtgctacaggcaaggatgct
ggggagtatctctgtgatactggtgatgacagcattgtcttcttcatcactgtagaagcc
cggcctgtgtgcattgtcaacaaggaggaggcgcagagcccgctggaggtgcaggagggg
gacagtgtgacactggtggctcggctgtccccggagacagcggcagtgcagtggcagaag
gagggacagacgctgtgctcaggtgggcggctgctggtgtgcagcgagggtcccacacgc
agcctcaccatcaagcaagcagagctgggtgacggtggcatcttcctctgcgacgctggt
gatgatgaggtgcatttcacactgcatgtgaaagaggcacccgtgctgttcgtgaacaaa
cgagaggagcaggagaagctgctggtgctggagggcggcagtgccgtgctctctgccatc
acctccacggagcgctccgatgtcacctggctgggcccgcggcaggcggcagtggccggc
gagcgctgcgagctgcgccgggacggccgcgtgcacagcctcatcatccacaacgtggcc
atggaggacgccggcacctacacctgcctctccccccacgaccagatgcagttcgacgtg
aacgtccgagagctgcgggtgaagttcctgcgcgggctggcggacgtgcgagcgcggcag
ggcgagcgggtggtgctgtggtgcgagctttgcaaggcgcggggcgacgtggtgtggcgg
aaggacgggcgagtgctggcgcctggcccccgccggcagatgacggcagagggacgggag
cggtcgctggtgctgagccgcgtggagcccggggatgccggcgagtactgctgcgagtcc
aacgacgaccagaccctggcgacgctgacggtacaggtccccagggtggtggagatcata
atggagctgcagaacctgacagtgctggagggcgaggatgccaccttcaagtgcctggta
tcccccgaagatgtggctgtgacatggcagctgaatggccagcccgtggtccccaatgag
cgtctgctgatgacaaggagtgggctgtgccacagcctcaccctacggcagtgccagaca
ggtgatgcaggcactgtgacagccacagctgaggggctggtgagcacagctcggctgagt
gtacaagaggcacaggtgctgtttgtgcggaagctgcaggatatggtagcagaggagcag
ggggatgtgtgcctggaggtggaggtgagccacgaggctgccgaggtgcagtggctgaag
cagggcatcctccttcagccgggcagcaagtaccagctgcaggagtcggggtgccggcgc
accctcaccatctgctgccttggccctgctgaccgcggcacctaccgctgcgagagcctg
cacgaccgcacgcaggccaagctccacgtggagccccggaaggtgtcgatccggacacca
ctgagagatgtggagacctttgagaaggagacagccacctttcacctggaactgtctcac
cctggtgtgaccggggtctggacacgggacggcatccgggtgaagcccagcagtacgtgc
cggatcagtgccacaggctgcgggcacagcctgacactggagaggcttgcactggaagac
tcgggcaccgtcaccttcactgctgacactctgcgctgcagcgcccacctgcgtgtaagg
gagcctccagtcaccatggtgagggtcccacgagacctgggagtcccagagacaggggtc
gccagctttgagtgtgagctgtctcgccccaatgcagaggtgaaatggttcaaggatggg
caggagctgcggccagggcccaactgccgcatctactcggcgggacggcgccgcatcctg
cagctgagccgctgcgagctgaccgacaccggcagctacacctgcgatgcaggtgactgc
caggcctctgccgtgctgcacgtacaggggacggagcgccaggtccacattgtgcaggag
ctgcaggacgtccaggtccgggagggtgacaacgcagtcttcacctgtgaggtgtcacat
ggggatgtgaagggcgagtggtttcgggacggggagaagatcaaggtctccagcacagtg
aagatacggcacgaagggacccggcatttcctgctgttctgtggtgtacgccctgaggac
aagggactcatccgcttcacagccaggacagtcacctcagaggccagtctgcaggtggaa
gcactgccaatccggattgtgaagccactgcgggacaagacggtgctggcgaggcacaag
gcgacactggagtgcactgtgtcccacgcccggggccgtgtgcgctggctccgtggggac
actgagatctttgctggtgacaagtatgagatctgcaacctggactgctaccgcacgctc
atcattcaccgcgtgggccccgaggatgaggactcatacacctgcgacgccttcgatgac
cgctccactgcccggctccttgtggagggtgagtgggcacctagaggggcaccgctggca
gctgccgtgctgctgtgccttgcagtagagggacaccagaacccatgtccctgtcccctg
ttgctagcaagagtctga
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integrated database retrieval system
