Geospiza fortis (medium ground-finch): 102038895
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Entry
102038895 CDS
T03755
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04010
MAPK signaling pathway
gfr04020
Calcium signaling pathway
gfr04148
Efferocytosis
gfr04218
Cellular senescence
gfr04310
Wnt signaling pathway
gfr04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102038895 (NFATC1)
04310 Wnt signaling pathway
102038895 (NFATC1)
04020 Calcium signaling pathway
102038895 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102038895 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
102038895 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102038895 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102038895 (NFATC1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
102038895 (NFATC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
102038895
NCBI-ProteinID:
XP_014162461
LinkDB
All DBs
Position
Un
AA seq
1026 aa
AA seq
DB search
MGERRRIEGSRYLGASPLLPARALQELGVWSRAASGRIDTGGTGAWRLSRLGKRDRPGRA
LSAQPPESFAGALLVYGGGPERTFPSPAHGGGRQRSESRFTALFIAAGTRSLAAAEREHY
NYASSNVNAGLPLNVAHSSLSTPCHGLQTSNPVISVVPSTNHPSGYGGHIDSGASEYYLP
PNMRPNGAPALESPRIEITSYMGLHHNNNQFFHDEVEEAIPNAKRSPSTATLNLPNIEAY
RDPSCLSPASSLSSRSCNSEASSYESNYSYPYTSPQTSPWQSPCVSPKTTDTEEGYQRSM
VACTLLSSPRHSPSTSPRTSITEENWLGARNSRPPSPCNKRKYSLNGRQTSYSPHHSPTP
SPQNSPRMSVTDDTWLGNTNQYTSSAIVAAINALTTDSTIDMNDGIPIKSRKTTIDHTPS
MTLKTEPAGEDHGTISPTADLSPEDFSSFQHIRKGNFCEQYLSVPQHPYQWAKPKPLSPT
SYMSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHG
YLESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHETILSNTKVLEIPLLPEN
NMRAIIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQANGRTLSLQVASNPI
ECSQRSAQELPLVEKQSTDSFPVTGGKKMVLTGHNFLQDSKVIFVEKAPDGHHVWEMEAK
TDKEMCKPNSLVVEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQLFTYLPANVPIIKTEP
TDDYEPAQTCGPMNQGLSPLSKPYYSQQIMMPPDPGSCLVAGFASCQQRNAVMSPSPNAS
PKLHDLSSSPYKCIPNPGHSHLGLQQPAGGVPTIQEVPRSIVVHPSPPEQSSHVMLQPQV
SQHLSSSCPLGYQQTLYPNSPSSPVPSVTQEPTYLQSCSPTHSSIMGQQQQQLPKVHRNE
SPTTQPLSLPELHEESNHNLAPIPVTIKREPEELDQMYLDDGKSSTTQVCIRHVVLSVSS
LKAPFF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgggggagagacgaaggatcgagggcagcaggtacttgggagcttctcctcttctccct
gccagggcactccaggagttgggcgtctggagcagagcagcgtcagggaggattgacact
ggtggaaccggggcctggcggctgtcccgcctcgggaagagggacaggccgggcagagcc
ctgtcagcacagccaccggagtcctttgcaggcgccctcctggtgtatggcggcggcccg
gagaggacctttccctccccggcgcacggaggcggccggcagcgttccgaatcccgcttt
actgcgctttttatagcagctggcactaggtccctggcagcagccgaacgagaacactat
aattatgcatcttcaaatgtaaatgctggcttgcctctaaatgtggcacattcctcattg
tcaactccatgtcatggcctgcagacatcaaatcccgtcatttcagttgtcccatcgaca
aaccatccctctggatatggaggacacattgacagtggagcctccgagtactacctgcca
ccaaacatgagacctaatggggctccagcgctggaaagccccagaattgagatcacatct
tacatgggattgcatcataacaacaaccagtttttccacgatgaggtggaggaggccatc
cctaacgccaagcggtcgccttccactgccactttgaacttgccgaacatcgaggcatac
agagacccgtcctgcctcagtccagcaagtagcttgtcttccagaagctgcaactctgaa
gcgtcttcttatgagtccaactactcatatccatacacttcacctcagacgtctccatgg
cagtccccatgtgtctctccgaagaccaccgacacagaggagggctaccagcgcagcatg
gtggcctgtactttgctcagttctccaaggcactctccatcaacgtctcccagaacgagc
atcacagaggagaactggctgggcgctcgcaactccagacctccgtctccctgcaacaaa
aggaagtacagcctcaatggccggcagacctcctattccccacaccactcccccactcct
tctccgcaaaactcaccgcggatgagtgtcacggatgacacgtggctggggaacacaaac
cagtacaccagctccgccatcgtcgctgccatcaacgccctcaccactgacagcaccatt
gatatgaacgatgggattcccatcaagtcgaggaagaccaccattgatcacaccccatct
atgactctcaaaactgagccagctggcgaggatcatgggaccatatcgccaactgccgat
ttgtcaccagaagacttctccagcttccagcacatcaggaaaggaaacttctgcgagcag
tacttgtctgtgccacagcatccttatcagtgggccaaaccaaagcctctatctccaaca
tcctacatgagcccatccctgcctgctctggattggcagctgccatctcactcaggacct
tacgaactgcgcatcgaggtgcagccaaaatcccaccaccgagctcattacgagacagaa
ggcagtcgaggggctgtgaaagcatctgcagggggccaccccattgtgcagctccatggt
tacttagaaagcgagccgctcacgctgcagctgttcattgggactgcagacgaccgcctg
ctgcgaccccatgccttctaccaggttcaccgcatcaccggcaagacagtttccaccacc
agccatgaaacaatactttccaacaccaaagtcctggaaatccctcttcttccagagaac
aacatgagagcaatcatcgactgtgctgggatattaaagctccgaaactctgacatcgag
ctgcgcaagggagagacggacattggtcgtaagaacacgcgtgtgcgtctggtcttcagg
gttcacatcccacaggccaatggcaggaccctctccttgcaagtagcctccaaccccatt
gagtgctctcagagatctgcccaagaactgcctctggtggagaagcaaagtaccgacagt
tttcctgttactggagggaaaaaaatggtactgactggtcataactttttgcaagactcc
aaagtcatctttgtggagaaagcaccagatggtcaccatgtgtgggaaatggaagccaaa
accgacaaagaaatgtgcaagccaaattcattggtggttgagataccacctttccgcaat
cagagaattaccagccctgttcaggtcaacttctatgtctgcaacgggaaaagaaagagg
agccagtaccagcttttcacctatcttcctgctaatgttccaattataaaaacagaaccc
acagatgactatgagcctgctcaaacctgtggaccaatgaaccaaggcttaagccctctc
tctaaaccgtactacagtcagcagatcatgatgccccctgatcctggttcgtgccttgtg
gccggctttgcctcctgtcagcagagaaacgccgtgatgtcaccttctcccaatgcaagt
cccaagctgcacgacctttcatcctctccttacaagtgcatccccaacccgggccacagt
cacctcggacttcagcagcccgctggaggtgtccccaccatacaggaagtgccaaggtct
atagttgtgcacccaagcccccccgagcaatcatctcacgtcatgctgcagccgcaggtg
agtcaacatctgagcagtagctgtccccttggttatcaacaaacactctatcccaacagt
ccctcttctccagttccatctgttacccaagagccaacctatttgcagtcctgcagtcca
actcactcatccataatgggtcaacagcagcagcaactgccgaaggttcacagaaatgag
tctccaacaacccaaccactgtcattgccagagttgcatgaggaaagtaatcataatttg
gcccctattcctgtaacgatcaagcgagaacctgaggaattggaccagatgtacctggat
gatggtaagtcctccacgacacaggtttgcattcgccatgttgttctatcagtgagttcc
cttaaggcccccttcttttga
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