Geospiza fortis (medium ground-finch): 102038913
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Entry
102038913 CDS
T03755
Symbol
FANCA
Name
(RefSeq) Fanconi anemia complementation group A
KO
K10888
fanconi anemia group A protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102038913 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102038913 (FANCA)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
102038913 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_CTD
FANCA_helical
Motif
Other DBs
NCBI-GeneID:
102038913
NCBI-ProteinID:
XP_005424887
LinkDB
All DBs
Position
Un
AA seq
1433 aa
AA seq
DB search
MARCGAERYSTALYGVTWLGRARERRSPFGSGAELQGAALQLLDQHQNLAELLLEVGDSA
RPGVQDGAEHQGVSPESFIVSVLQEQASKLGVPTATLAAKNAAANVEQICQDPGSPSRAP
LLNSDQRKRLTCLLQTVKDLLANNMFCRSLFCQEMWKMKEPLVLEAVWHLHSSDIVGLAE
LLDSPAGPAAVEWLCSSLCGLCEQAGDISCGDTELAQRILSDFAIVFLQNGFEQPSELGR
KVEFQKVAYICRAVLQRMLAWMLDAVGKEKQEDVSMVQAVRFWLNVFNVSLYGSVAHPES
LRQFFRHTLTEVLTYHPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESVCQL
QQVLETHEVNWQHVLSCVSTLVVCQAEAGQLFKDLLSHLLLKAFGNYDMENMITAFLIAR
QAALEGPAVFMPYSEWFKASFGNAGGHHGSSKKSLVFLLEFLSELVPFEAAPYLKVHIMF
PPCVASKHRSLLLEYISLAKTRLADLQVAIEDMGLYEDLSAPEEAVQPQAQALRDVEKAL
QIFESTRKVPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGRMAFIDSLKRADKIPS
NLYSTYLQACHAMKEKVLQDDSKAEPSLPKEPLEQLEAELAELRTLVVEQAQWEEVAAQL
AVVSDRLRRVLGDSSEDNEHNSRVRVAVPAPGLAGGARAVVDLLLTSFCQTLLAASSFNP
PDRQGPCLSLLVKMMCGHRNLLPALLARLCQLLYHQGPSLGAAHILGLAAFVIHLSECRA
LIPAVEADFGAAQAVPGKALSVSEYWSSLLVCRTEESFVFCLRFCTAAAAYLMCKFSSCS
REDFCALVPPGLIKKLQFLVPRLSLEARGVLCEEARGALSWSCLSCPSLNYRRASLCLWR
QAGFQELLKEKAFQLSFREWLLLELEVCPEKDILSAAERQDFHYWAIYQRYLPAPSAAGG
CDGDLEEACGVILNAILDSSHRLELGAPARSKTSLSPEILCRLQELVLELRCRPKLLPGC
SAAQRHLVFELLQGRLAGREPEQGPALGQQLWRQQELLQHRRILLGLPASTLVTTCWKGN
RAVLDCDSFFAFVNSELKNVSSRGYALSFDITAHFFRGLLSASLDCEDAAEGVNEALATC
QTKCPVVLLSAALWWPRLEPALCSQWKRLSGAPLAGELARLRGWHSSGTRFLCSGAAFPV
SDPPWLSAAFLHGAILQHSPRGTEALERLGTGAEQLLVALLFFSLLDLISATIAPKEGVD
FQASLERSLQILQCLQGRGTAWPLLFQPAEGAPGRFHVLHRAASQQHTRLLPLAFYSLTP
SFQQELLQQEPTFLSVALQMYIQLLQLFVEGQVLPQSDPHPTEHDPLELISAARQFLLGA
IPHCPAQSLGNIQPLLSTCEELDPELAATLLHFSRPAVDVELEEELELFRGMD
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtgtggcgcggaacgttacagcacggctctgtacggtgtgacatggctcggg
agagccagggagaggagaagcccctttgggagtggagcagagctccagggagcggctctg
cagctgctggaccagcaccagaacctggctgagctgctcctggaggtgggagattcagcc
aggccaggtgtgcaggatggggcagagcaccagggagtgtcaccagagtcatttatagtc
tctgttctgcaggaacaggcctcaaagctgggtgtgcccacagcgaccttggcagccaaa
aatgccgcggccaacgtggagcagatctgccaggatcctggcagcccctccagagccccg
ctgctgaactctgaccagagaaagaggctgacctgcttgcttcagactgtgaaggatttg
ctggcaaacaacatgttctgtcgctccctcttctgccaggaaatgtggaaaatgaaggag
cccctggtgctggaggccgtgtggcacctgcacagcagtgacatcgtgggcctggcagag
ctgctggacagcccagcaggcccagcagcagtggagtggctctgcagcagcctctgtggc
ctctgtgagcaggctggggacatctcctgtggggacacggagctggcacagaggattctc
tcagactttgccatcgtgtttcttcagaatggctttgagcagccttcagagctgggaagg
aaggtggaattccagaaggttgcctacatctgccgtgctgtcttgcagaggatgctggca
tggatgcttgatgctgttggtaaggagaagcaggaagatgtttccatggtgcaagctgtg
aggttctggctgaatgtgttcaacgtgtccctctatggaagtgtggctcacccagaatcc
ttgaggcagttcttcagacacaccctgactgaggttctcacctaccaccccgtgctgaaa
gtgtctgatgccatccagatgcagaaggagtggagctttaccaggacttctcccctgctc
acggctctgtatcgcaagctgctggtggcattcagtgtgaaggaatccgtgtgccagctg
cagcaggtgctggagacccacgaggtgaactggcagcacgtgctgtcctgtgtgtccacg
ctggtggtgtgccaggctgaggctgggcagctcttcaaggatctcctgagccatctcctg
ctcaaggcctttgggaattatgacatggaaaatatgatcactgccttcctgattgctcgc
caggctgctctggagggccctgctgtcttcatgccttactctgagtggttcaaggcttcc
tttgggaatgctggtggccaccatgggagcagtaagaaatctctggtcttcctcttggag
ttcctgtcagagctggtgccctttgaagctgccccatacctgaaggtgcacatcatgttc
ccgccgtgcgtggccagcaagcaccgctcgctgctgctggagtacatcagcctggccaag
acccgcctggccgacctccaggtggccatagaggacatggggctctatgaggacctctct
gcccccgaggaggccgtgcagccccaggcccaggctctccgggatgtggaaaaggccctt
cagatatttgagagcaccaggaaggtcccaacctctgtgatagaagccagcattttcaga
cgaccatattacacttcctggttccttccagctctgctcaggccccgtgtgctcccaaaa
accccagatggacgaatggcttttatagactccctaaagagagctgacaaaataccttcc
aacttgtactccacatacctgcaagcctgtcatgccatgaaagagaaggtgttacaagat
gactccaaagcagagcccagccttcccaaggagcctttggagcagctggaggctgaactg
gctgagctcaggactctggttgtggagcaggctcagtgggaagaggtggcagctcagctg
gccgtggtgtcagacagactccgccgcgtcctgggtgacagcagcgaggacaacgagcac
aattcccgggtgcgggtggccgtgcctgccccggggctggcagggggtgcccgggctgtt
gttgatctcctgctgacatcattctgccaaaccctactagctgcttcctctttcaaccct
cctgacaggcagggcccgtgcctctccctgctggtgaagatgatgtgtggacacaggaat
ctcctgcctgcactcctggccaggctctgccagctcctttatcaccagggtccttccctc
ggtgctgctcacattttgggactggcagcttttgtgatccacttaagtgaatgcagagct
ttaattcctgcagtggaagccgattttggggccgctcaggctgttcctggcaaggccctt
tctgtctcagagtactggagctccttgctggtgtgcaggacagaagaatcatttgtcttc
tgcttgaggttttgcactgcagcagcagcttacctgatgtgcaagttttcatcctgctct
cgtgaagatttttgtgccttggttcctcctggcctgattaaaaagctgcagttcctggtg
ccacggctgagcttggaggctcggggagtcctgtgtgaggaggccagaggtgccctgagc
tggagttgcctgtcctgcccctctctgaactacaggagagccagcctgtgcttgtggagg
caagcaggcttccaggagctcttgaaggaaaaggcattccagctgtctttcagggagtgg
ctgctgctggagctggaggtgtgccctgagaaggacattctctctgctgcagagagacag
gatttccattactgggccatctatcagaggtacctccctgcaccttctgctgcggggggc
tgtgatggagacctggaggaggcctgtggagtcatcctcaatgccatcctggattcctca
cacaggctggagctgggtgcccctgcccgctcgaagacgtcgctgagccccgagatcctc
tgcaggctgcaggagctggtgctggagctgaggtgcaggccaaagctgctccctggctgc
tcagctgcccagagacacttggtgtttgagctgctccaggggaggctggcaggcagagag
ccagagcagggacctgccctgggacagcagctctggaggcagcaggagctgctgcagcac
aggaggattctgctggggctccctgcatccaccctggtcaccacgtgctggaaagggaac
agagcagtgctggactgtgacagcttctttgcttttgtgaactctgagctgaagaacgtc
agctcccggggctacgcgctctccttcgacatcaccgctcacttcttcaggggcctgctg
agtgccagcctggactgtgaggatgcagcagaaggggtcaacgaggctctggccacgtgt
caaaccaagtgtcccgtggtgcttctctctgcagcgctctggtggccgaggctggagcca
gcactttgctcccagtggaagaggctctctggggctccccttgcaggagaactggccagg
ctgaggggctggcacagctcaggcaccaggttcctctgctcaggagcagctttccctgtc
tctgacccgccctggctctcagctgccttcctgcacggggccatcctgcagcactcacca
cgagggacagaggccctggagaggctgggcactggtgcagagcagctcctcgttgctctg
ctgttcttctcactcctggatctcatctcagccacaatagcaccaaaggaaggagtggat
ttccaggcatctctggaacggtccctgcagatcctgcagtgcctgcaagggaggggcacg
gcctggccactgctgttccagccagcagagggagcccctgggaggttccatgtcctgcac
agagcagcctcgcagcagcacacccggctcctgcccctggccttctacagcctcaccccc
agcttccagcaggagctgctccagcaggagcccaccttcctcagcgtggctctccagatg
tacatccagctgctgcagctctttgtggaagggcaagtcctgccacagtctgatccacac
cccacagagcacgatcccctggagctgatctctgcagcccggcagttcctgctgggagcc
atcccccactgccctgcccagagccttggcaacatccagccgctcctcagcacctgtgag
gaactcgacccagagctggcagccacccttctgcacttctcccggcctgctgtggatgtg
gagctggaggaagagctggaactgttccgaggaatggactga
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integrated database retrieval system
