KEGG   Geospiza fortis (medium ground-finch): 102038926
Entry
102038926         CDS       T03755                                 
Symbol
PLOD1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr00310  Lysine degradation
gfr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102038926 (PLOD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gfr04147]
    102038926 (PLOD1)
Enzymes [BR:gfr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     102038926 (PLOD1)
Exosome [BR:gfr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102038926 (PLOD1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 102038926
NCBI-ProteinID: XP_014165146
UniProt: A0A6I9Z834
LinkDB
Position
Un
AA seq 710 aa
MRKAELPQNLLVLTVATKQTEGFQRFRRSAQFFNYKVQVLGLEEEWQGGDDQQPAGGGQK
VRLLKSALKQYGDKEDLIILFVESYDVLFASGPAELLKKFKQAKSKVVFSAESYIYPDRK
LEAKYPQVRDGKRFLGSGGFIGYAPNLKKLVEEWKGEDDDSDQLFYTRIFLDPEKRESIN
ISLDHRSRIFQNLNGALDEIVLKFENARVRARNLLYDTLPVVIHGNGPTKLQLNYLGNYI
PQIWTFETGCTVCDEGLRSLSGFKDEALPMILIGIFIEQPTPFLSQFFLRLRNLHYPKQR
IQLFIHNHEEHHLMEVDSFVEEHGKEYLSVKVIGPDDEVENAEARNLGMDLCRKDPDCDY
YFSLDAEVVLKNKETLRILIEQNKLVIAPLVSRHEKLWSNFWGALSPDGYYARSEDYVDI
VQRRRVGLWNVPYISSVYMVKGKALRSELEQGDLFHSGKLDADMALCHNIRSQGVFMYLT
NQHQFGHILSLENYQTSHLHNDLWQIFSNPEDWREKYIHENYTAALKGKLVEMPCPDVYW
FPIFTDTACDELVEEMEHYGQWSTGDNTDSRIQGGYENVPTIDIHMNQIGFEREWYKFLL
DYIAPITEKLYPGYYTKTQFELAFVVRYKPDEQPSLVPHHDASTFTINIALNRVGIDYEG
GGCRFLRYNCSIRAPRKGWTLMHPGRLTHYHEGLPTTRGTRYIAVSFIDP
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgaggaaagcagaacttccacaaaacctgctggttctgactgttgccaccaagcagact
gagggattccaacgcttcagaagatcagcccaattcttcaactacaaagtccaggtgctg
gggctggaggaggagtggcagggtggagatgaccagcagccagctggaggggggcagaag
gttcgtctcctcaagtcagctctgaagcagtatggggataaggaggacttgatcatcctt
ttcgtggaaagctatgatgtgctctttgcttcaggccctgcagaactgctgaagaagttc
aaacaagccaaaagcaaggtggttttctcagcagagagttacatctatcctgacagaaag
ctggaagccaagtaccctcaggtgcgagacggaaagcgcttcctgggttctggaggcttc
ataggttatgctccaaacctgaagaagcttgtggaggagtggaaaggagaggatgatgac
agtgaccagctcttctatacaagaatcttcttggatccagaaaaaagagaaagtatcaac
atcagtctagaccacagaagccggatcttccaaaacctaaatggagcattagatgagata
gttctgaagtttgaaaatgcacgagtgagagcaagaaacttgttatatgacactctgcct
gtggtgatccatggaaatggacccaccaagctgcagctgaactacctgggaaactacatt
cctcagatatggacatttgagactggctgcacggtgtgtgatgaaggtctgcgaagcctc
tcggggtttaaggatgaggcattgccaatgattctgattggcattttcatcgagcagccc
accccattcctctcccagttcttcttgcggcttcgtaacctccattacccaaagcagcga
atccagctcttcattcacaaccatgaggagcatcacttgatggaggtggactcttttgta
gaggagcatggcaaagaatatctctctgtcaaagtgatcggaccggatgatgaggtggag
aatgctgaggcacgtaacttgggcatggatttgtgcaggaaggatcctgactgtgactat
tactttagcctggatgctgaggtagttctgaagaacaaagagactctgaggatcctgatt
gaacagaacaagctggtgattgcccccctggtaagccgtcatgagaagctgtggtccaat
ttctggggagcgctgagccccgatggatactacgcccgctcggaagattacgtggatatt
gttcaaaggaggagggttgggctctggaacgttccctacatcagcagtgtttacatggtt
aaaggcaaggctctgcgctcggagctggagcagggggatctgttccacagtggcaagctg
gatgctgacatggctctgtgccacaacattcgcagccagggagtctttatgtacctgaca
aaccagcatcagtttggacacatactgtccctggagaattaccagacaagtcacctccac
aatgacctctggcaaatattcagcaatcctgaggattggagagaaaagtacatccatgaa
aactacacagcagctctgaaagggaaattggtagaaatgccctgcccagatgtttactgg
ttccccatcttcactgacactgcctgtgatgagctggtggaagaaatggaacattatggc
cagtggtccacaggtgacaacacggacagcagaatacaaggaggatatgagaatgtcccg
actattgacatacacatgaaccaaataggctttgaaagagaatggtataagtttcttctg
gactatattgcacccatcacagagaagctgtacccaggatactacaccaagacccagttt
gagctggcctttgtggttcgctacaaacctgacgagcagccatccctggtgccccaccac
gacgcctccacctttaccatcaacattgccttgaacagagtgggcatagactatgagggc
ggaggctgccgcttcctgcgctacaactgctccatccgagccccgaggaagggctggacc
ctgatgcaccccggccgcctgacccactaccacgaggggctgcccaccaccagaggaacc
cgctacatcgccgtgtccttcatcgacccctag

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