Geospiza fortis (medium ground-finch): 102038954
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Entry
102038954 CDS
T03755
Symbol
RRN3
Name
(RefSeq) RRN3 homolog, RNA polymerase I transcription factor
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102038954 (RRN3)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
102038954 (RRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
102038954
NCBI-ProteinID:
XP_005420469
UniProt:
A0A6I9HHK6
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All DBs
Position
Un
AA seq
616 aa
AA seq
DB search
MLGADEFISSPPRKTVRFGGTLTEILLKYEKGDTTDFELLKHQLSDPDIKDAQLINWLHE
FRASVAYLTKELGQLVNILLKLPWLRRSREVVEEYLGFLGNLVSAQTVHLRPCLRMIVAQ
FVPPRITIREDDVDISDSDDDDENISANFDTCHRALQTVARYVPSTPQFLMPILVEFFPF
INKSERTLECYVHNLLRVTVYLPTLRLQILELIIEKLLKLDVSTPQQDIEDAEETANNSA
SEEKSTEEGLFDMEEDEDRKGSKAVSPNIERMAHPLAERLDILMTILFSYIRDVCHVDGK
LDISNTKDLYRDLVSVFDKLILPTHASCHVQYFMFYICSFKLGLAEAFLDHLWKKLQDPN
NPSVIRQTAGSYIGSFLARAKFIPVVTVKACLDLLVNWLHKYIDNQDKGANAYCDVALHG
PFYSTCQAVFYTLIFRHKQLLDGNLRKGLSYLQSLNFERIVMCQLNPLKICIPSVVNLFA
AITRKYQLVFCYTIIERNNRQFIPVVRSGTGGDLVQTCTNPLDSFFPFDPYILKRSKKTI
DPMYQFWEELSAEDLEDLKKPIKKGTSEDEDDDFLKGETPQNDGVVEIAPNSYESNTRSP
VSSIGSPADCYVPYPL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctgggagcggacgagttcatcagctccccgcccaggaagacggtgcggttcgggggg
accctgaccgagatcctgcttaagtacgaaaagggtgacaccacagattttgagttgtta
aaacatcagctgtcagatccagacataaaggatgcccagctcattaattggctgcatgaa
tttcgagcttctgttgcgtatttgaccaaagagcttggacaactggtcaacattttgctg
aagctgccatggttgaggaggagccgagaggtagtggaagaatatctgggatttcttggc
aaccttgtgtcagcacaaactgtccacctcaggccctgcctccggatgatcgtggcacag
tttgtccctcctcgaataaccatcagagaagatgatgtggatatttcagattctgatgat
gatgatgaaaacatttctgcaaactttgatacatgccacagagcattgcaaactgttgcc
agatacgttccttcgacaccacagtttctcatgccgatacttgtggaattctttcctttc
attaataaatcagaaagaactctggaatgttatgtccataacctgctgcgagttactgtg
tatcttccaactctgaggcttcagattctggagcttattattgaaaagctgctgaagttg
gatgttagcactccacagcaagatattgaagatgctgaagaaactgctaataacagtgct
agtgaggaaaaatctacagaggagggactttttgacatggaggaagatgaagacagaaaa
ggcagcaaagctgtctctcccaatattgagagaatggcccatcctcttgcagagcgcctg
gacatcctgatgaccatcctgttctcatacattagagatgtttgccatgtggatggcaag
ctcgacatcagcaacacaaaggatttgtatcgggatctggtttctgtttttgacaagctc
attttaccaacccatgcttcgtgtcatgtacagtatttcatgttttacatctgtagcttt
aaattggggctggctgaagcatttttagaccatctttggaagaaactgcaggatccaaac
aatccttcagtaatcaggcagactgctgggagttatattggcagcttcttggcaagagct
aaatttattcccgttgttacagtaaaagcatgtctggatcttctggtgaactggctgcat
aaatacattgacaatcaggataaaggagctaatgcctactgtgatgtagctctccatggg
ccattctattccacgtgtcaggcagtgttttatacacttattttccgtcataaacaactt
ttggatggaaatttaaggaaaggtctgtcatatctgcagagtttaaattttgagcgcatt
gtcatgtgtcagctgaaccccctgaagatttgtatcccttctgttgtcaacttgtttgct
gccattaccaggaaataccagttggtgttctgctacacaattattgagaggaacaacagg
cagttcatccctgttgtgcggagcggcactgggggcgaccttgtgcagacctgcaccaac
cccctcgacagcttcttcccctttgacccctacatactcaaaagatcaaagaagaccatt
gatcctatgtatcagttctgggaagagctgagtgctgaagatcttgaggatctgaagaaa
cccattaaaaagggtacttctgaagatgaagatgatgactttttgaaaggagaaactcct
caaaatgatggtgtggttgaaattgcaccaaattcttatgagtccaacacacggagccct
gtgagcagcattggctcccctgcagactgttacgtgccatacccactgtga
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