Geospiza fortis (medium ground-finch): 102039010
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Entry
102039010 CDS
T03755
Symbol
SMPD3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00600
Sphingolipid metabolism
gfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
102039010 (SMPD3)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
102039010 (SMPD3)
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Motif
Pfam:
Exo_endo_phos
CBM_6
Motif
Other DBs
NCBI-GeneID:
102039010
NCBI-ProteinID:
XP_005422856
UniProt:
A0A8N5ENH9
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Position
Un
AA seq
592 aa
AA seq
DB search
MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCI
IITTPIYLALLVASLPFALIGFLLWSPLQSARRPYIYSRLKDKNHANGATLLTEWKAAGS
GKSFCFGSANVCLLPDSLARFNNVFNTQARAKEIGRRIRNGASRPQIKIYIDSPTNTSIS
AASFSSLVSPQAGDNRTVSAGIKRTTSMEYKGDNCGSNNGEENREDKGGSGEPHEGEENT
CIVRINGEENGHMSDTEADTVNGQAHASGPAEPPLEGDAEVSKTPNHKQKEGDSGSLDSC
SASRESLVKVRVGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANL
DFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHSCCSFKFVNSGLLFASRYPVMD
AAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLD
MLQDWLSEFRKSTSSSSTANPEELVAFDVLCGDLNFDNCSSEDKLEQQHSLFTHYKDPCR
VGPGEDKPWAIGKSSPALREVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggttttatacacttctccatttcccaacagctttctgtcagttctgcattctttttcc
tggggcctgattttcccatgttactggctagcagacaggctcgtgggctcttttgttcca
acaacctatgaaaaacgtcaaagagcagatgacccatgctattttcacgcactctgcatc
attatcaccactcccatctacctggcactcttggtggcctctcttccttttgctctgatt
ggcttcttgctctggtcgcctctgcagtcagccagaaggccctatatctactccaggctg
aaagacaagaaccacgccaatggagccacactgctcactgagtggaaggcagcagggagt
gggaaaagcttctgctttggcagtgccaacgtttgcctgctgcccgattctctggcaaga
tttaataatgttttcaacacacaggccagggctaaagagatcggccggaggatccgcaat
ggggcgagcaggccgcagattaaaatatacatagattctcctaccaacacatccatcagt
gcagcgagtttcagcagcctggtctccccgcaggctggagataaccgcactgttagtgct
ggcatcaaaaggacaacatcaatggagtacaaaggagataactgtggctcaaacaacggc
gaggagaacagagaagataaaggtggaagcggagagccacacgagggagaagaaaacact
tgcattgtccgtatcaatggagaggagaatggccacatgtcagacacagaagcagacacc
gtcaatggccaggctcatgcaagtggcccagcagagcccccactggaaggtgatgcagag
gtgtcaaaaacaccaaaccacaaacagaaggaaggagattctgggagtttagacagctgc
tctgcctcacgagagtccctagtcaaagtccgtgttggagatggcacagtggaccaaagc
actgtcaacaacaagctcctctacaaagcttcaatcatgaagaagacttcagtgcggaaa
aagaaacacacagatgagacctttgatcatgagatctctgctttcttccctgccaacctg
gactttctgtgcttgcaggaagtgtttgacaaaagagctgcggagaaattgaaagagcag
ctccatcactattttgaatacattgtctatgatgttggggtctacagctgccacagctgc
tgtagctttaagtttgtgaacagtggtctactttttgccagccgctatcctgttatggat
gctgcctatcactgttaccccaatggaagaggaatggactccttggcttccaagggagcc
ttgtttctcaaggtgcaagtgggaagtacacctcaggaccaaagaattgtgggatacatt
tcctgcactcacttgcaagctattgcaggagacacaactgttcgatgtgagcaactggat
atgcttcaagattggctgtctgaattcagaaaatctacctcctcctccagtacagccaat
ccagaggagctggtggcttttgatgtactctgtggagatctcaactttgataactgctcc
tctgaggacaagctggagcagcagcactctctgtttacacactacaaagacccgtgtcga
gttggtcctggggaggataagccttgggcaatcggtaagagttctccagctctcagggaa
gtggaagagttcagctttatcacccagctggcaggcctgactgaccaccttccagtagca
atgcgtctcatggtgtctacaggagaggatgacccttaa
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