Geospiza fortis (medium ground-finch): 102039067
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Entry
102039067 CDS
T03755
Symbol
VPS36
Name
(RefSeq) vacuolar protein sorting 36 homolog
KO
K12190
ESCRT-II complex subunit VPS36
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102039067 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102039067 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102039067 (VPS36)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102039067 (VPS36)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102039067 (VPS36)
Exosomal proteins of colorectal cancer cells
102039067 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
DUF1351
BBL5
DUF5847
Xre-like-HTH
Sigma_reg_C
Motif
Other DBs
NCBI-GeneID:
102039067
NCBI-ProteinID:
XP_005420894
LinkDB
All DBs
Position
Un
AA seq
359 aa
AA seq
DB search
MQIFQVKFDSGVLLLSTHRLIWRDQKNHECCIAVPLSQIVFIEEQAAGIGKSAKIVVHLH
PASSNKEPGPFQSSKYSYVKLSFKEHGQIEFYRRLSEEITQRRWESMPTGQAMQVNKDSQ
AGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMEKAKEMVELSKSIANKIKEKQG
DITEDETIRFKSYLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQAPLEERGGIMSLT
EVYCLVNRARGLELLSPEDLVNACKMLESLKLPLRLRIFDSGVMVIELQSHNEEEMVAAA
LETVSEKGSLTADEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttcaggtgaaattcgatagtggagttttactgctgagcacacacagactg
atctggagggatcagaagaatcatgagtgctgcattgctgtacctctgtctcagattgta
tttattgaagagcaagcagctgggataggaaagagtgccaaaatagtagttcatcttcat
cctgcttcttcaaacaaagagcctggtccattccaaagcagcaaatattcctatgtcaag
ctttctttcaaggaacatgggcagattgagttctacagacgattatcagaagaaatcaca
caaaggagatgggagagcatgcccactggtcaggccatgcaagttaacaaggattcacag
gcaggaagaataagggctgtaggaattgtaggtattgaaaggaaattagaagaaaaaaga
aaagagactgacaaaaacatttccgaggcttttgaggaccttagcaagctaatggagaag
gctaaggaaatggtggaattatccaagtcaatagccaacaagattaaagaaaaacaaggt
gacatcactgaggatgagaccattaggttcaagtcctacctgctgagtatgggtatagct
aatccagttacgagggaaacatatggatctggtacacagtaccacatgcagctggcaaag
caactggctggaatcctgcaggcacccttagaggagcgaggggggatcatgtctctgacg
gaagtgtactgcctggtgaatcgtgctcgagggctagagttgctgtcaccagaagattta
gtaaatgcctgtaaaatgctggaatcactgaaattaccactaaggcttcggatatttgat
agtggtgtgatggtaattgaactccagtctcataacgaagaggaaatggtagctgctgct
ttagagacagtatctgaaaagggttctctcacagctgatgagtttgctaaactggtgggg
atgtctgttctcttagccaaagaaaggctgcttcttgctgaaaagatgggccatctttgc
agagatgattcagtggaaggcttgagattctacccaaatttatttctgacacaaagctaa
DBGET
integrated database retrieval system
