Geospiza fortis (medium ground-finch): 102039139
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Entry
102039139 CDS
T03755
Symbol
TP53BP1
Name
(RefSeq) tumor protein p53 binding protein 1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102039139 (TP53BP1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
BRCT
Tudor_5
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
102039139
NCBI-ProteinID:
XP_014163806
LinkDB
All DBs
Position
Un
AA seq
2002 aa
AA seq
DB search
MSAPRRCVSSPATLPGLRSPSSSPGPRTGAQSPDRSACRHRYPPLPPQKGPSSPADQRLP
KQRTASEREQSAAASIPQPPRYRGSSLPTAPAPFAARPRPVGKTDAPTILAGKRRRSAAL
SAEDGRGAPAAPTPGTPTGGLVCSGAPRPGQRGSGSRSPGNGVDRGREGGLAAVAAVLGP
GQDVRCGGLGAPGRCQVTPRNEPRGGGLQEPLRDVSECLYCSALGKAGERSEGDVEDCAS
LPCVEDTGMSQLQFGVLELSQSQDFESDLVPSEGDARHQLHSGPTVVSSRLVKNESKYEF
FADNIETDSSTEAHTALESQAEKSERTLQVAEEHTRKETPVSGASKTEESLGSGHEESDI
LSTQEEMFPENHATGSGSLITKVEEGNSLACTPARSLQVLQLSGQAFLVQEGDSTVSSGL
VIPPPVSFGPNALVPSSPTEQGKAEDEQMDICIPADGRELMQKQKGDMLVEMAFPCIPPR
PLAQPQASTPVSQSAPTFFPGSLTMPSQPEFSHDIFVPTQSPENKHGEEKTAGLTPLCLP
RDLSGSTDALSKMSTDDSVLQPPDSCKLMLSASACSQPTNTDISSGSLNTGQDCETTQVE
RISECKASDSRLCSVENEKIKLKVNAGDQAPSENGEKAKKENVETPGMPVGQFVSADVGE
DGPLASTIHREIECISGSQAAADQSGLLEILSYAQESSKPEAVPETQCEEQEEKLQIKEK
QIKEDRSVVNITLSHRFILEREGQCHEDKEVNDSCKNSKNVAQELEKVGPECQGKEALKA
CTFDTGEAKIMDKMTTNMAKLNEVLAKPSVGELLEQHDLLPKLKSDVQSEVALCAKNHPD
CSELGQVVITSNQPSLQERGFETHVVQHENLVPKSMEDTVMTRNLEQEEQMQPQEKATSK
SPSPSSGTPFHFTLPKEGDVIQSLTSITPPLTGHLKMGPRRHSTPIVDDTCPDSTIATSD
VTAEGTMGTNDVTVESAVVSADVSEVYEKGESGVVPELDAKLSLRMNLVTPVNDGSEESL
PFSLEKPAASDRKDGSSAAAEAAASSQKASSVFSRVCEVLREDEARGHGLSTSPFRGDQL
FFPGTQEDAELHTNPSDWQYQQQKADGSGGQSLIPRRMQQDCHQQSSGAEDGESMETDVV
STQAEDRRRMQRKQSKAVQIDQSQDRWENIKNKGIQTTADCLFTRTTVTTATQTSEEICR
QVETGTSMSGQKPGQQDVSVQTDESGEKLVNTSGDDTDSLRSQGEEEFNLLHPPKGQVQR
RHMRTIREVRTVVTRVITDVYYINGAEVERKVVEETEEPVVECQECETDMSPSRTAGGSS
LTSGDLGDVSSFSSKASSLHRTSSGGSSGHSATHSSGISGRGTGAVKGKVCGTETGEFAL
PIGRGILGKLSPRKGAGQPASPLRVSQTGALPCEEEEDCMPGTCQAGRAPVTLRGRGRRG
RPPSRTTGTRDLAGLPGMEDLSTTASPEEKSFTRSVRLPDGGEKSGISGFCALRRSDSPE
IPFQVVTVPLDCADSSTGSSFVGLRVVAKWSLNGYFYSGRITQDVGAGKYKLCFDDGHEC
DVLGRDILLCDPIPLETEVTALSEDEYFSAGVVKGHRKESGELYYCIEKEGQRKWYKQMA
VILSQEQGNKLREQFGLGPYEPVTPVTKAADISLDNLVEGKRKRRSNLGSPSASSSSTTP
TRKGQGSPRVPPVSLSGKRKLLASEDERSPAKRGRKSAVIKPGAVRGGEFLSTCEGADVA
DPPVLHSDHGPLPHNKTLFLGYAFLLTMATPSDKSVNHQKPSDGPTGSSEEEEDFLEMTP
YDKHYVAQQLRAGAGYILEDFNETQCNAAYQCLLIADQHCRTQKYLLCLARGIPCVSHIW
VHDSCHANQLQNYRNYLLPAGYSLQEQKLLEWHPRENPFHNLKVLLVSDQQENFLDLWSE
ILMTGGAASVKQHYSRAQNKDIALGVYDVVVTDFSCPAGVLKCAEALRLPVVSQEWVIQS
LIAGERVGYKQHPKYKHDYVPH
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccgcgcaggtgcgtctcctcacctgcgactctgccagggctgcgcagcccc
agcagctcaccgggaccgcgcacaggagcgcagagcccggacaggtccgcttgccgtcac
cgatatcccccgttacctccccagaagggcccgtcctccccggccgaccaacgtcttcca
aagcaacgaacagcatccgagcgcgaacaaagcgccgccgcctccatcccgcaacctcca
cgataccggggctcctcactcccgaccgccccggcacctttcgctgctcgccccaggccg
gtggggaagacagatgcacctaccatcctggccgggaagcgacgccgatcggctgcgctg
agcgcggaggatggccgcggagcgcccgcagcgccgaccccgggcacccccacgggcggc
ctggtctgctccggtgctccgcggccgggccagagaggctccggctcgcgatctccgggc
aacggcgtggaccgaggccgagaaggcgggctcgctgctgtagcggccgtgctcggcccc
ggccaggacgtgcggtgcggagggcttggagcgcctggtcggtgccaagtgacccctcgg
aacgagccgcggggaggcggcctgcaggaacccctgcgcgacgttagcgagtgtctctat
tgcagtgcccttggaaaggccggggaacgaagtgaaggtgatgttgaggactgtgcttct
ttgccgtgtgtagaagatacaggcatgtcacagctccagttcggagttctagagctgtcg
cagagccaggactttgagagtgacttagtgcccagtgagggagatgctaggcatcagctc
cactctggacccactgtcgtttcttccagacttgttaagaatgagtctaaatatgaattt
tttgcggacaacatagaaactgactccagtacagaagcacatactgctttggaaagccag
gcagagaagtctgaaagaactctacaggtagcagaagagcataccagaaaggaaacacct
gtcagtggtgccagtaaaactgaggaatcccttggttctggtcatgaggagtcagatatc
ttgtcaacacaggaagagatgtttcctgagaatcatgcaacagggagtggctctctgata
accaaggtggaagagggaaattctctggcatgcacccctgcccgcagtctgcaagtcctg
cagctctctgggcaggcattccttgtacaggagggtgattccactgtctcttcaggccta
gttattcctcctcctgtttcctttggacccaatgcccttgtccccagcagtcctactgaa
caggggaaagcagaagatgaacagatggatatatgtatccctgcagatggaagagaactg
atgcaaaagcagaaaggagatatgctggtggagatggccttcccttgtatccctccaaga
cctctcgctcagccacaggcttcaactccagtgtcccagagtgccccaaccttctttcct
ggatctttaactatgccatcacaaccagagttctctcatgatatctttgttccaactcag
agtccagagaataagcatggagaagaaaaaactgctggtttaacccctttatgcttacca
agagatctctctggatctacagatgctttgtcaaagatgtctacagatgactctgtgtta
cagcctcctgattcctgtaaactgatgctttctgcaagtgcatgtagccagcccacgaat
acagacatcagttcaggctctctgaacacgggccaagactgtgagaccacacaggtagag
aggatttctgaatgcaaggcctcagactcaagactctgttctgtggagaatgagaaaata
aaactaaaagtgaatgcaggtgatcaagcaccctctgaaaacggtgaaaaagcaaaaaag
gagaatgtagagactccaggaatgcctgtaggacagtttgttagtgcagatgttggagaa
gatgggccattagcctctacaattcatcgggagattgagtgtatttctggaagtcaggct
gctgcagatcagtctggtcttcttgagattttgtcatatgctcaagagtcttccaaacct
gaggcagttcctgagactcagtgtgaagaacaagaagaaaaactgcaaataaaagagaag
caaataaaggaagataggtctgttgttaatataacgctttctcataggtttattcttgaa
agggaaggacagtgtcatgaagataaagaagtgaatgattcttgtaaaaatagcaaaaat
gtagcccaggaattagaaaaggttggaccagaatgtcagggaaaagaagctttgaaagct
tgtacttttgacactggagaggcaaagatcatggataaaatgactactaacatggcaaag
ctcaatgaagttttagctaagccttctgtaggggagttactggagcaacacgatttgctt
ccaaagttgaagagtgatgtccaatcagaagtggcattgtgtgccaaaaaccaccctgat
tgttcagaactgggacaggtagtgataacaagcaatcagccatcacttcaagagagaggg
tttgaaacacacgtggttcagcatgagaatctggtaccaaagagtatggaggatactgtt
atgacaaggaatctggagcaagaagagcaaatgcagccacaggagaaggcaacttcgaag
tcccccagtccttccagtggaaccccgtttcattttactttgccgaaggagggtgatgtc
attcagtccttaactagtataacaccacctcttactggccatctcaaaatgggacccagg
agacacagcacaccaattgtggatgatacttgcccagacagcactatagcaaccagtgat
gttacagcagagggcacaatggggaccaacgatgtcactgtggaaagtgcagtggtatca
gcagatgtgtcagaagtgtatgagaaaggagagtctggtgtggttcctgagttggatgca
aaactttctctgcggatgaaccttgtgacccctgtgaatgatgggagcgaggagtccttg
ccgttcagcttggaaaagcctgcagccagtgacaggaaagatggatcctctgctgctgct
gaggctgctgctagctcccagaaagcatcatctgtgtttagtcgtgtctgcgaagttctt
cgagaggatgaggccagaggtcatggtctttccacttctccgtttaggggagatcagtta
ttttttcctggcacacaagaagatgctgaattacataccaatcctagtgattggcagtac
cagcaacagaaggcagacggcagtggtggacagagtctaattcctcggaggatgcagcag
gactgccatcagcaatcttctggtgcggaggatggagagtctatggagactgatgttgta
agcactcaggcagaagataggaggagaatgcagagaaaacaaagtaaggctgttcaaatt
gatcaaagtcaagacaggtgggaaaacatcaagaataaagggatccaaactacagcagac
tgtctttttacccgaacaactgttacaacagcaacacaaacatcagaagaaatctgtaga
caggtggaaacgggaaccagtatgtctgggcaaaaacctgggcaacaagatgtgagcgtt
caaaccgacgagagtggggaaaagcttgtcaacacctctggagatgacacggactctttg
cgcagtcagggagaggaggaattcaaccttcttcacccacccaaaggccaagttcagcgt
cgccacatgcgaaccattcgagaagtgcgcactgttgttacacgtgttataacagatgtc
tactacatcaatggtgcagaggtggaacgaaaggtagttgaggaaactgaggagcctgta
gtggagtgccaggaatgtgagactgacatgtccccttcaagaactgcagggggctcgtcg
ctgacctcaggggaccttggtgatgtcagctctttctcgtctaaggcctcaagtctccac
cgtacatccagtggaggaagcagtggtcactctgccacacacagcagcggcatctcaggg
cgaggaactggagctgtaaaagggaaagtgtgtgggacagaaaccggtgaatttgcttta
cccattggcagaggcatcttaggaaaactgagccctaggaaaggagctggtcagcctgca
tcgccactcagagttagccagacaggagcactgccttgtgaggaagaggaggactgtatg
cctggcacttgtcaggctggcagagcacctgtgacacttcgtggacgaggaagaagagga
cgcccaccatctcgaacaacaggaacaagagatttagctggactgccaggtatggaggat
ctctcaactacagcatcacctgaggagaagtcatttactcgttcagttcgcctgccagat
ggaggagagaaatctggcatttctggcttctgtgccttacgtcgtagtgactctccagaa
atcccatttcaagtggtgactgttcctttggactgtgcagactcctccactgggagcagc
tttgtgggcctcagggttgtagcaaagtggtccttaaatgggtacttttattcggggaga
attacccaagatgttggagcaggaaagtacaagctgtgctttgatgatggacatgagtgt
gatgtgctaggaagagatattttgctctgtgatcctatcccactggagacagaggtgact
gcactctctgaggacgagtacttcagtgcaggtgtggtgaagggacaccggaaggagtct
ggagagctatactactgcattgaaaaggaaggccagaggaagtggtataaacaaatggct
gttatcctgtctcaggaacaaggaaataagctgcgggagcagtttgggctaggtccttat
gaacctgtcacccctgtgaccaaagcagctgacatcagtcttgataatctggtggagggg
aagaggaagcgacgtagtaaccttggttctcccagcgcttccagcagcagcacaactccc
actcgtaaagggcaggggagtccacgtgtcccaccagtctcactgtctgggaaaaggaaa
cttcttgcttctgaagatgaacgatccccagctaaacgtggccgcaagtcagcagtgata
aagcctggggctgtgagaggtggagagtttttaagcacctgtgaaggtgcagatgttgca
gatcccccagtactgcacagtgaccatggacccttgccccacaataagaccctctttttg
ggctatgcctttcttctcaccatggcgacaccaagtgacaaatcggtcaatcaccagaag
ccatcagatggtcccactgggagcagtgaggaggaagaagattttttagagatgactccg
tatgataaacattacgtagcacaacagctgcgagcaggagctggctatattctggaagac
ttcaatgaaacccagtgtaatgcagcataccagtgtcttttaattgcggaccaacattgt
cgaactcagaaatacttactgtgccttgccagagggatcccttgtgtgtctcatatctgg
gtccatgatagctgtcatgctaatcagcttcaaaattaccggaattaccttttgccagct
ggatatagcctccaggagcaaaaactgctagaatggcacccacgagaaaacccattccat
aacctgaaggttctcctggtgtcagaccagcaagagaacttcctggatttgtggtctgaa
attcttatgacaggaggagcagcatctgttaaacagcattactcacgtgctcaaaacaaa
gatattgctttgggtgtttatgatgtggtggtgactgatttttcctgcccagctggtgtc
ttgaagtgtgcagaagctttacggctgcctgttgtctcgcaagagtgggtgatccagagt
cttattgctggggagagagtaggctacaagcagcatccaaaatataaacatgactatgtc
cctcactga
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