Geospiza fortis (medium ground-finch): 102039159
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Entry
102039159 CDS
T03755
Name
(RefSeq) syntaxin-1B-like
KO
K08486
syntaxin 1B/2/3
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102039159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102039159
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102039159
Membrane trafficking [BR:
gfr04131
]
SNARE
Syntaxin (Qa)
Stx-PM
102039159
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
102039159
Exosomal proteins of other body fluids (saliva and urine)
102039159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
PH_17
Lge1
Lzipper-MIP1
SNARE
Motif
Other DBs
NCBI-GeneID:
102039159
NCBI-ProteinID:
XP_005431585
UniProt:
A0A6I9HTM3
LinkDB
All DBs
Position
Un
AA seq
185 aa
AA seq
DB search
SRKFVEVMTEYNATQSKYRDRCKDRIQRQLEIRSGDRAVSVPDRCKDRSGATASSVPDRC
KDRIQWQLEISDHQVIYSDHQVTTWRSWVTTWRSPAPTDHQVTTRSFLVTTWTSLVTTWI
KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIKYNVEHSV
VTLST
NT seq
556 nt
NT seq
+upstream
nt +downstream
nt
tcccgcaagttcgtggaggtgatgaccgagtacaacgcgacgcagtccaagtaccgggac
cgctgcaaggaccggatccagcggcagctcgagatcaggagtggggacagagcggtcagt
gtccctgaccgctgcaaggaccggagcggcgccacagcgtccagtgtcccggaccgctgc
aaggaccggatccagtggcagctcgagatcagtgaccaccaggtgatttatagtgaccac
caggtgaccacgtggagatcctgggtgaccacctggaggtccccagcaccaactgaccac
caggtgaccaccaggtcatttctggtgaccacctggacatccttggtgaccacctggatc
aagatggactcgcagatgaccaagcaggcgctgaacgagatcgagacgcggcacaacgag
atcatcaagctggagaccagcatccgcgagctgcacgacatgttcgtggacatggccatg
ctggtcgagagccagggcgagatgattgaccgcatcaagtacaacgtggagcactcggtg
gtcactctgagcactg
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