Geospiza fortis (medium ground-finch): 102039237
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Entry
102039237 CDS
T03755
Symbol
GSPT1
Name
(RefSeq) G1 to S phase transition 1
KO
K03267
peptide chain release factor subunit 3
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102039237 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102039237 (GSPT1)
03012 Translation factors [BR:
gfr03012
]
102039237 (GSPT1)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102039237 (GSPT1)
Translation factors [BR:
gfr03012
]
Eukaryotic type
Release factors
102039237 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
102039237
NCBI-ProteinID:
XP_005420471
UniProt:
A0A6I9HHG6
LinkDB
All DBs
Position
Un
AA seq
499 aa
AA seq
DB search
MEISESVVENGETEMSPEESWDHKEEPSEAELGGGPAGDAGPSEESAQEMMEEEEEIPKP
KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET
WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV
LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK
LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRSVDG
PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETESVAPGE
NLKIRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI
EEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR
DEGKTIAIGKVLKLVPEKD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttcagaatctgttgtggaaaatggagagacagaaatgtccccagaagagtca
tgggaccacaaagaagagcccagtgaagcagagcttggaggtggtcctgcaggggatgcg
gggccttctgaagagagcgctcaggaaatgatggaagaggaggaggaaataccaaaaccg
aaatctgttgtagcacctccaggtgctcctaaaaaagagcacgtaaatgtagtattcatt
ggacacgtagatgctggcaagtcaactattggaggacaaataatgtatttgacaggaatg
gttgacaaaagaacacttgaaaaatatgaaagagaagctaaagaaaaaaacagagaaaca
tggtacctttcatgggccttagacacaaaccaagaggaacgagacaaaggtaaaacagta
gaagtgggtcgtgcctattttgaaacggagaagaaacacttcactattttagatgctcct
ggacacaagagctttgttccaaatatgattggtggggcttctcaagctgatcttgctgta
ctggttatttctgcaagaaaaggagagtttgaaactggatttgagaaaggtggacaaaca
agagaacatgccatgttagcaaaaacagcaggtgtaaagcatttaatagttcttattaat
aaaatggatgatccaactgtaaactggagtaacgaaagatatgaggaatgtaaagagaaa
ctggtgccatttttgaagaaagttggcttcaatcccaaaaaggacattcatttcatgccc
tgctcaggactgactggagcaaaccttaaagaacagtcagaattctgtccttggtatatt
ggattaccatttattccatacctggataatttgccaaacttcaaccgttcagttgatgga
ccaatcaggctgccaattgtggataaatataaggacatgggcactgtggtccttgggaag
ctggagtcgggctctatttgcaaaggacagcagcttgtgatgatgccaaataagcacaat
gtggaagttcttggaattctttctgatgatgtagaaactgaatcagtagccccaggtgaa
aatctaaagatcagactgaagggaattgaagaggaagagatccttccaggatttattctc
tgtgatctcaacaacctttgtcattctggacgcacatttgatgcccagatagtgataatt
gagcacaaatccattatctgcccaggttataatgcagtgctgcacatccacacctgtatt
gaagaagttgagataacagccttaatctgcttggtagacaaaaaaacaggagaaaaaagt
aagacacggccccgttttgtgaaacaagatcaagtctgcattgcccgtttaaggacagca
ggaacgatctgccttgagacattcaaagatttccctcagatgggtcgcttcaccttaagg
gatgagggtaagaccattgcaattggaaaagttctgaaactggttccagagaaggactaa
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