Geospiza fortis (medium ground-finch): 102039339
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Entry
102039339 CDS
T03755
Symbol
SEC31B
Name
(RefSeq) SEC31 homolog B, COPII coat complex component
KO
K14005
protein transport protein SEC31
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102039339 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102039339 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gfr02044
]
102039339 (SEC31B)
Membrane trafficking [BR:
gfr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102039339 (SEC31B)
Secretion system [BR:
gfr02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
102039339 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40
Beta-prop_EIPR1
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR35_TULP_N
TPR_Sec16
Beta-prop_HPS5
MIOS_WD40
WD40_RFWD3
Beta-prop_DCAF4
Prp18
Motif
Other DBs
NCBI-GeneID:
102039339
NCBI-ProteinID:
XP_014165102
LinkDB
All DBs
Position
Un
AA seq
1216 aa
AA seq
DB search
MKLKEIERTAVQAWSPANNHPIYLATGTSAQQLDASFSTNATLEIFEADFRDPSLDMKQK
GALPASNRFHKLIWGNFGNGSAESAGVLIGGGDNGVLTMYSVHRVLASKGDPVIAQAEKH
SGPVRALDFNPFQNNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQ
HILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVI
QIWDLRFATSPLSQLEGHTRGVLSVSWCQADPELLLSSAKDNRILCWNPSMGEVVYELPI
RSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNNLDPFGT
GQSLPPLQVPEQVTQTTLIPPLKKPPKWIRRPVGVSFAFGGKLITFGLTKAPGQQMQQTY
PHQVFISQVTTETEFLLRSKELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQ
ESRTKLLKLLGYTKEDLQKKIASCLSNGIPDKQPLPEAGDTNAAPDQLLMNSSDDVAAVS
SSSTFFDNLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIA
GGDNLLKETQKRYFAKRKTNLSMLLSSIVQQKWQDIVCTCDLQSWKEALAILLTYSKHED
YTQLCDMLGARLESEGDAALSNDACLCYISSGNVERLVECWVKNHETSSPLALQDLIEKV
MVLSRSIEMLRGMAGPAPGPVLAERITQYANLLASQGCLAAAMNYLPSSSNQLLIEQLRD
RLFHAQGESVGDQQPPPFPSTRVNVGVIKPAATKSGSILEGAAHKAGPRHPEKPNYPSSF
APSAPSQPSVPSLFTPQPVPAMPVTPHHVAPPQANTGPQTSVYSRDTYPYPQYNLGLNPA
AVSGPAVSQSQPFGPVGVRPVGPAPFSSQPSLPGQLMPMTSPGVPPPRPALFTPASAPSS
QLPAACPLPVASQSPLDFSSAPFNCPMNMGYPQGGPGAPSTKPLPAAVPPPPTGFFPWLD
PHTDHAAQESWSDPSTGRGGLQKKKLPEKFTPLAPITAPVMGMPADPQGIHPQLSRLQES
GQSPPGAPREGSLQYHQLPRESIERKELPPEHQALKATFEGLVQRCSAVATDPKTRRKLE
DALQRLECLYEKLREQALSPNILMGLHEIARCIEAKNYPQGLLVHTQVVSSSSFSEVSGF
MPILKVLMTIAGKLNV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaagaaattgagcgaacagctgtgcaggcatggagtccggcaaacaaccac
cctatttacctagcaacaggaacatctgcccaacaactggatgcatccttcagtacaaat
gccaccttggaaatatttgaggctgacttcagggatccctccctggatatgaagcagaaa
ggagcacttcctgcctcaaacaggtttcataagctgatctgggggaactttggcaatggg
tctgcagagtccgctggagtgctcattggtgggggggataacggagtgctgaccatgtac
agcgtgcaccgcgtcctggcttccaagggcgaccccgtcattgcgcaggcagagaagcac
tcagggcctgttcgagcccttgacttcaaccctttccagaataatctcttggcttctgga
gccaatgattctgaaattttcatctgggacttgaataatttcagtgtgcctatgactccg
gggactaaatcacagccacatgaagacatcagtgtggtgtcctggaatcggcaggtgcag
catatcctgtcctccgctcaccccagcggcaaggctgtggtctgggacctcaggaagaat
gagcccatcatcaaagtcagtgaccacagcaacagaatgcattgctcaggaatggcctgg
catccagaagttgcaacccagctagtcctttcctctgaggatgaccgtttgccagtgatc
caaatatgggacttacgctttgctacctctcctcttagccagctggaagggcacaccagg
ggagttctctctgtttcttggtgccaggctgaccctgaactgctgttgagtagtgccaaa
gacaaccgaatcttgtgctggaacccaagtatgggagaggtggtgtatgagttgcccatt
cggagtcagtggtgctttgatgtccagtggtgtcctaggaatccttcagtcttctctgct
gccacttttgatggctggatcaacatttattctgttatgggtgggaacttagaagctcag
cagaagacacaggctgacaagatctcttcctccttcaacaacctggatccctttggtaca
ggacagagccttcctcctctgcaggtgccagagcaagtaactcagaccaccttgattcca
ccattaaaaaaaccacccaagtggattcgcaggcctgtgggggtttcatttgcatttgga
ggaaaactgatcacctttggtctaaccaaagctcctggacagcaaatgcagcagacttat
ccacaccaggtattcatcagtcaagtcactactgaaactgaattcctactccgatccaaa
gaactgcagatggccttgcagtcagggaacctccttgattactgccagggcaagatccag
acagccaagctgccatttgatgagaacctctggaacttcttgaaggtgaatttggagcag
gagtccaggactaaacttctcaagctgctgggctacactaaagaggatctgcaaaaaaag
attgcctcatgtttgagtaatgggatcccagataaacagccccttcctgaggcaggtgat
acaaatgctgcaccagatcagcttttgatgaattccagcgatgatgtagctgctgtttct
tcctcttcaaccttttttgataacctcatcccacagaatatgagcacattggagattcct
gtcacagaagatacagatggactcatcagccaagcccttttgttggggaattttgagggt
gcagtggagctgtgcatgcgagcagagcgctttgctgatgccatcatcttagccatagct
ggtggggataacctcctgaaggaaacccagaagcgctactttgccaagcggaaaacaaat
ctctccatgctgctttcctccattgtgcagcagaagtggcaagatattgtttgcacttgt
gatctacagagctggaaggaggcactggccatcttgttaacatactcaaagcacgaagac
tacactcagctctgtgacatgctgggtgcccgcctggagtcagagggagatgcagccctg
tccaatgatgcctgcctctgctatatctcatcaggcaatgtggagaggctggtggaatgc
tgggtaaaaaaccatgagacttcatcaccacttgccctacaggatcttatagagaaggtg
atggtgctgagcaggtccattgagatgctccgaggcatggcagggccagcaccaggccct
gtcttggcagaacgaatcacccagtatgccaatctcctggcatcacaaggatgcttggca
gctgcaatgaattacttacccagcagctctaatcagctcctgattgaacagctccgagac
cggctctttcatgctcaaggagagagtgtgggtgatcagcagccacccccttttccctcg
actcgtgttaatgtaggggtcatcaaacccgcagctaccaagagtggttccatccttgaa
ggagcggcccacaaagcaggtcccagacatccagagaagcccaactatccgtcatcgttt
gccccttcagcaccatctcagccttcagtgccttccctcttcacacctcagccagtgcca
gcaatgcctgtgacacctcaccacgttgcccctccccaggccaacacaggtccacaaaca
agtgtctattccagagacacatacccatacccacagtacaacttgggcttgaatccagca
gcagtctcagggccagctgtgtcacagtctcagccatttggaccggtgggagtcagacct
gttggtcctgctcctttctccagccaaccctctctgccagggcagttgatgcccatgaca
tctcctggtgttccaccacccagaccggccctcttcactccagcctcagccccatcatct
cagcttcctgcagcctgtcctctccctgttgccagccagtctcctctagacttctcttca
gcacctttcaattgccccatgaacatgggttatcctcagggaggtcctggagctccatct
actaaaccactgccagcggccgttcctcctcctcccacaggtttcttcccttggctagat
ccccacacggatcatgcagctcaggaatcttggagtgatccctctactggaagaggaggc
cttcaaaagaaaaagttgcctgagaaatttactcctctggcccccatcacagctccagta
atgggcatgcctgctgacccccaagggatccatcctcagctatccaggttgcaagaatct
ggccagtcacccccaggagcacccagggaaggcagcctacagtatcaccagctacctagg
gaaagcattgagaggaaggagctgccccctgagcaccaggctttgaaggctacatttgaa
gggttggtgcagcgctgctcggctgtggccactgatccaaaaacacgaaggaagctggag
gacgcgctgcagcggctggagtgtttgtatgagaagctgcgcgagcaggccctctctcca
aacatcctcatgggtctccacgaaattgcccgatgcattgaggctaagaactacccacag
ggtctcctggttcacacccaagttgtgagcagcagcagtttcagtgaggtgtctggtttc
atgcccatcctgaaagtcctcatgaccatagcaggcaagctgaatgtgtaa
DBGET
integrated database retrieval system
