Geospiza fortis (medium ground-finch): 102039562
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Entry
102039562 CDS
T03755
Symbol
GRIN3A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04020
Calcium signaling pathway
gfr04080
Neuroactive ligand-receptor interaction
gfr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102039562 (GRIN3A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102039562 (GRIN3A)
04082 Neuroactive ligand signaling
102039562 (GRIN3A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102039562 (GRIN3A)
Ion channels [BR:
gfr04040
]
Ligand-gated channels
Glutamate (ionotropic)
102039562 (GRIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF3734
SHE3
Motif
Other DBs
NCBI-GeneID:
102039562
NCBI-ProteinID:
XP_014166497
LinkDB
All DBs
Position
Un
AA seq
1001 aa
AA seq
DB search
MGMNSTVMVLLKRISGSDWLQGFMSLNDGFMKHRSYSWSQFTPISFDETLRTLQFANTAK
GMKNSPKANEVLDDDTLLKRYHKDIRDLKKQLEEVSSKTQIHAMEKDQLAQLLEEKNSHQ
KNPLHLQMSLENSLSSDADVTFSILAMNNWYNFSLMLCQEEWNITDFLFLTQQSSKFHLG
SIINITANLTSTSDLLNYLQFYLESIKDTTSTMVMFGCDMEKTRRIFEITTQFGVMPPEL
HWIIGDSQNVEELRTEGLPLGLIAHGKTTQSVFEHYVQDAMELVARAVAAASMIQPELAL
IPSTMNCMDTEERNITSGQYLSKFLANTTFDGLSGHIKVKGSSIVSSENNFFIWNLQHDP
VGNPMWTRLGSWQEGKIIMDYGIWPEQAQRHKSHMQHPTRLHLRVVTLIEHPFVFTRDVD
DEGLCPAGQLCLDPLTNDSGVLDNLFETLQGRNDTVPNELKKCCYGYCIDLLEKLAEDMN
FDFDLYIVGDGKYGAWKNGHWTGLVGDLLAGTAHMAVTSFSINTARSQVIDFTSPFFSTS
LGILVRTKDTAAPIGAFMWPLHWTMWLGIFVALHITAVFLTLYEWKSPFGMTPRGRNRNK
VFSFSSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEK
IYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEMHEYMRRYNVPATTDGVAYL
KHDPEKLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPPNSPLTSNISDLIS
QYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCVGFGLSILTTIGE
HIVYRLVLPRMKKKSKMKYWLHTSQRLHRALNSSFIEEKHQPKKKRVEKRDHVGNSQHAV
WNTANLGNCHRKKYICTDEGQNEVTIHQHQDIPLPQGRRETPPSLTTNGKAESLNTARTS
VLQELTELEKQIEIIKQELQLAMDRKSELEEYARTNRTAEP
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgaacagcacagtcatggttcttctgaaaaggatcagtggctcagactggctg
cagggtttcatgtccttaaatgatggtttcatgaaacatagatcctacagctggtcccag
tttactcctatttcttttgatgagacactcaggactcttcagtttgccaacacggccaaa
ggaatgaaaaattcaccaaaagccaatgaagttcttgatgatgataccctcctgaagaga
taccacaaagacattcgggatttgaaaaagcagctggaggaagtgtcttcaaaaactcag
attcatgcaatggaaaaggaccaactggcccagctgttggaagaaaaaaactcccatcaa
aaaaacccccttcacctgcagatgagcttagaaaattcactgagttctgatgctgatgtc
actttctcgatcctcgcgatgaacaactggtacaatttcagcctgatgctgtgccaggag
gagtggaacatcacagattttctcttcctcacacaacagagctccaagttccacctgggg
tccattataaacatcacagcaaacctcacttcaaccagtgaccttctgaactacttgcag
ttttacctggagagcatcaaagacacgacgtcgaccatggtgatgtttgggtgtgacatg
gagaaaacacggaggatttttgagataaccacgcagtttggtgtgatgcctccagagctg
cactggattattggggattcacagaacgtggaagagctgaggacagaaggtttgcccctc
ggtctcatcgctcatggcaagacaactcagtcggtcttcgagcactacgtgcaggatgcc
atggagctggtggccagggctgtggcagcagccagcatgatccagcctgagctggctctc
attccaagtacgatgaactgcatggacacggaagagaggaatatcacttcaggccagtat
ttgtcaaagtttttagccaacacaacttttgatggtctcagcggccacattaaggtgaag
ggctcatccattgtcagctcagaaaataatttcttcatctggaatctgcagcacgacccc
gttggaaacccgatgtggacgcgcctggggagctggcaagaagggaagatcatcatggac
tatgggatatggccagaacaggcacagagacacaaaagtcacatgcaacaccccacccgg
ctgcacctgagggtggtgactctgattgagcatccctttgtcttcacaagggatgtagat
gatgaaggtctgtgcccagcagggcagctgtgcctggacccgctgaccaatgattcaggt
gtgctggacaacctgtttgaaaccctccaagggcgcaatgacaccgtgcccaatgagctg
aagaagtgctgctatggctactgcattgacctgctggagaagctggctgaggatatgaat
tttgattttgacttgtacattgttggggatggaaaatatggtgcctggaagaatggccac
tggactgggctggtgggagaccttcttgctggtacagctcacatggcagtgacatcattc
agcatcaacactgcccgaagccaagtgattgatttcaccagccctttcttttcaaccagc
ttggggattttggtgaggaccaaagacactgcagctcctattggagcctttatgtggcca
cttcactggactatgtggctggggatatttgttgctcttcacatcacagctgtattcctg
accttgtatgagtggaaaagtccttttggaatgacccctaggggaaggaacaggaacaaa
gtgttctccttctcctctgccctcaatgtgtgctacgcaatcctgtttggaagaacagct
gccatcaaacccccaaagtgctggactggaaggtttttaatgaatctctgggctattttc
tgcttgttttgcctgtctacatacacagccaacctagctgctgtcatggtgggagaaaag
atctatgaagaactttctggaatacatgacccaaagctccaccacccgtcccaagggttc
cggttcggcacggtgcgggagagcagcgcggaggactacgtgaggcagagcttccccgag
atgcacgagtacatgcggcgctacaacgtccctgccaccaccgacggcgtggcctacctg
aagcatgatccagaaaaacttgatgccttcatcatggataaagcactcttagattatgaa
gtgtcaatagatgctgactgcaagctcctaactgtgggaaaaccctttgccattgaagga
tatggcattggtcttccccccaactctccgctcacctcaaacatctctgacctgatcagc
cagtacaaatcccacggcttcatggatgttctgcacgacaagtggtacaaggttgttccc
tgtggaaaacgaagcttcgccgtcacggagacactgcagatggggataaagcatttctca
gggctcttcgtgatgttgtgtgttggctttggtttgtccattctcaccaccattggggag
cacatcgtgtacagactggtcctgccacgaatgaagaagaaatccaagatgaagtactgg
ctccataccagtcagagattacatcgtgctctaaacagttcatttattgaggaaaaacat
cagcctaagaaaaaacgagtagaaaagagggaccatgtggggaacagccagcatgcggtg
tggaacacagccaacctgggcaactgccaccgaaaaaaatacatctgcaccgatgagggg
caaaacgaggtgacaatccatcagcaccaggacatccccctgccacaggggaggagagag
actccgccttccttaaccaccaacgggaaagcagagtccctcaacactgcgaggacctcg
gtgctgcaagagctgacagagctggagaagcagatcgaaatcatcaagcaggagctgcaa
cttgccatggacaggaaatcagagctggaagagtatgcacggacaaacagaactgcagag
ccctag
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