Geospiza fortis (medium ground-finch): 102039619
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Entry
102039619 CDS
T03755
Symbol
HMG20B
Name
(RefSeq) high mobility group 20B
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102039619 (HMG20B)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
102039619 (HMG20B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
PI3K_P85_iSH2
TIP49
Leu_zip
Motif
Other DBs
NCBI-GeneID:
102039619
NCBI-ProteinID:
XP_005427400
LinkDB
All DBs
Position
Un
AA seq
615 aa
AA seq
DB search
MSPTQDTPERLSRGQPSPPSSPHHSSRSPHPPPGCPTYTGYTRAVPTAIHRSQRPLTPGT
PVLSPQRSTDPSAHLHRVHPCCPHSDPPIPAPTYTGYTRAVPTAIHRSQRPLTPGTPVLS
PQRSTDPSAHLHRVHPCCPHSDPPIPAPTYTGYTRAVPTAIHRSQRPLTPGTPVLSPQRS
TDPSAHLHRVHPCCPHSDPPIPAPTYTGYTRAVPTAIHRSQRPLTPGTPVLSPQRSTDPS
AHLHRVHPCCPHSDPPIPAPTYTGYTRAVPTAIHRSQRPLTPGTPVLSPQRSTDPSAHLH
RRSLTVLSGCRHATGKAQHGNFLVAIKQEKGESARVGGEKPEEEPVKKRGWPKGKKRKKI
LPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEAER
EKQQYMKELREYQQSEAYKMCTEKIQEKKIKKEDVGTVGVNTLLNGHPHKAGECSDTFST
FDVPIFTEEFLDQNKAREAELRRLRKMNTEFEEQNAILQKHTESMNCAKEKLEQELVQEE
RQTLALQQQLQSVRQALTASFASLPIPGTGETPTLSTLDFYMAKLHSAIESNPLQHEPLV
LRVKEILSRIASEHL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccactcaagacactccagaaaggctctcccggggtcagccctctccccccagc
tccccccaccacagctcccggtccccgcaccccccgcccgggtgccccacttacaccggg
tacacccgtgctgtccccacagcgatccaccgatcccagcgcccacttacaccgggtaca
cccgtgctgtccccacagcgatccaccgatcccagcgcccacttacaccgggtacacccg
tgctgtccccacagcgatccaccgatcccagcgcccacttacaccgggtacacccgtgct
gtccccacagcgatccaccgatcccagcgcccacttacaccgggtacacccgtgctgtcc
ccacagcgatccaccgatcccagcgcccacttacaccgggtacacccgtgctgtccccac
agcgatccaccgatcccagcgcccacttacaccgggtacacccgtgctgtccccacagcg
atccaccgatcccagcgcccacttacaccgggtacacccgtgctgtccccacagcgatcc
accgatcccagcgcccacttacaccgggtacacccgtgctgtccccacagcgatccaccg
atcccagcgcccacttacaccgggtacacccgtgctgtccccacagcgatccaccgatcc
cagcgcccacttacaccgggtacacccgtgctgtccccacagcgatccaccgatcccagc
gcccacttacaccgggtacacccgtgctgtccccacagcgatccaccgatcccagcgccc
acttacaccgggtacacccgtgctgtccccacagcgatccaccgatcccagcgcccactt
acaccgggtacacccgtgctgtccccacagcgatccaccgatcccagcgcccacttacac
cggcgctctctgacagtactctctggctgcagacacgccacgggcaaggctcagcatggg
aacttcctggtggccatcaaacaggagaagggagagtcggcgcgggtgggcggcgagaag
ccggaggaggagccggtgaagaagaggggctggcccaagggcaagaagaggaagaagatc
cttcccaacggccccaaagcccccgtgacgggctacgtgcgcttcctgaacgagcggcgc
gagcagatccgcacgcagcatcccgacctgcccttcccagagatcacaaagatgctggga
gcagagtggagcaaactgcagctctcagagaagcagcggtacctggacgaggcagagcgg
gagaagcagcagtacatgaaggagctgcgggagtaccagcagtcagaggcctacaaaatg
tgcacagagaagatccaggagaaaaagatcaaaaaagaggacgtgggcacggtgggtgtg
aacaccctactcaacgggcacccacacaaggctggtgagtgcagcgacaccttctccacc
ttcgatgtgcccatcttcaccgaggagttcttggaccaaaacaaggcccgggaggccgag
ctgcggcgcctgcgcaagatgaacacggagtttgaggagcagaatgccatcctgcaaaag
cacacggagagcatgaactgcgccaaggagaagctggagcaggagctggtgcaggaggag
aggcagaccctggccctgcagcagcagctccagtccgtgcggcaggccctcactgccagc
ttcgcctccctccccatccccggcactggggagacccccacgctgagcaccctggacttc
tacatggccaaactgcatagtgccatcgagagcaaccccctgcagcacgagccgctggtg
ctgcgtgtcaaggagatcctgtcccggattgccagtgaacacttgtga
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