Geospiza fortis (medium ground-finch): 102039658
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Entry
102039658 CDS
T03755
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102039658 (ZEB1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
102039658 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2HE
zf-C2H2_6
Zn_SUZ12
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
102039658
NCBI-ProteinID:
XP_005423961
LinkDB
All DBs
Position
Un
AA seq
1231 aa
AA seq
DB search
MGVTTRAFSLDQEHLSHSEFNPIIVPTCFPVIPTAGVWGAIGYRRRQWEAGLGSTQCVPA
GKGCSVGPREQLGCLLWRVLTWGHGVFSAIIIRNETFGNAGIHIGVIQLEFCYSTVAPTL
ELPAASSCAALYWMCTVRVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPEDE
LPTDHIVLPENSEREASTNTCWEGEAGKERKEILGPEAQTDEIGCTVKEDECDSDAENEQ
NHDPNVEEFLKQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGYK
RFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRKF
KCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVNG
RARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIVV
ASGINCSNPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAV
DGNVIRQVLENNHANLASKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSLE
QPSQLQVVPQNLKKENSVPANNCKNEKLPQDLTVKSEKDKNFEGETNDSTCLLCDDCPGD
LNALQELKHYETKSPPQLPQPSGAEAEKPESPVPSETGENNLSPGQPPLKNLLSLLKAYY
ALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKLSTPADNDD
QAATSNVSEPQNSTNNSQNPVSTTKSQTLPGASTLNGSHSSTPSTSPLNLSSSRNSQGYT
YTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQKD
NSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQ
VAYTYSATVSPAVHETPPKQIQANGNQDERQDTSSEGISNLEDQNDSDSTPPKKKMRKTE
NGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKPY
QCDKCGKRFSHSGSYSQHMNHRYSYCKREPEERDSAEPEELGPEALSSEHAVPRESPSQI
DSDERESLTREEEEFSEKEEEEEEEKDIEGLQEEKECREPQEEGHVEEVAAVEEEEGKIE
GDKNDEVVNQASNAEPEVIQNNGQVSEENNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaactacaagagcttttagcttggatcaggagcacttaagccattctgaattc
aatcccattattgttcccacttgtttccctgtgattcccacagctggagtgtggggtgcc
attggttacaggaggaggcagtgggaagctgggctggggagcacacagtgtgtgcctgca
ggaaagggctgctccgtgggaccccgagagcagctgggctgccttctctggagggtgctc
acctggggccacggggtcttcagtgccatcataatcagaaatgagacatttggcaatgct
ggcatccacattggagtgatccagctggaattctgttactccactgtggccccaactctg
gagttgcctgctgcctcctcttgtgcagccttatactggatgtgcacagtgagagtcacc
aattacaacaatgtggtagaagcaaactcagactcagatgatgaagataaattgcatata
gtggaagaggaaagtgtaacagatgcagcagactgtgatgctagtgtgccagaagatgaa
ttgccaacggaccatatagtgttaccagaaaacagtgaaagagaagcgagtacaaacact
tgttgggaaggtgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcagaca
gatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagagaatgagcaa
aaccatgaccctaatgttgaagaattccttaaacaagaagatacagctgttatctaccca
gaagcacctgaggaggaccagagacaaggcacaccagaagccagtggtcaggatgaaaat
ggaactcctgacgcgttttcccagctgctcacgtgcccgtactgcgaccgggggtacaaa
cgcttcacctctctgaaggaacacatcaaataccgccatgaaaagaacgaggataacttc
agctgctccttgtgcagttacacgtttgcgtacagaacgcagctcgaccgccacatgaca
tcacacaaatcaggaagagacccaagacatgtgacgcagtccagtggtaatcgaaaattc
aagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcacctacga
atccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccattct
ggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaatggt
cgagcccggtcagggctcaagatgtctcagtgctcctccccttccctttctgcatcacca
ggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagagcag
cttcctcttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtggtt
gcttcaggaattaattgttcaaaccctttgcaaaatggggtttttagtggtggtagccca
ttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagtaggt
ctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactaaaagtggcagtg
gatggtaatgtaataaggcaagtactggaaaacaatcatgctaatcttgcgtccaaagaa
caagaaacaatcaacaatgcatctatacaacaagctggccattccctcatttcagctatc
agtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagtttggag
cagccaagtcaacttcaggttgttccacaaaatctaaaaaaagaaaactctgttcctgca
aataattgcaaaaatgagaaattaccgcaagatctcacagtgaagtctgagaaagataag
aactttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgtccaggagat
cttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccccag
cccagtggagcagaagctgagaaacccgagtcccctgtcccatcagaaactggggagaac
aacttgtctcctggtcagccacctttaaagaaccttctgtcactcctaaaagcgtattat
gcattaaatgcacaaccaagtgcagaagagctttcaaaaatagcagattctgtaaactta
ccattggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacagatttctgtgcag
tcttctggaccatcttctcctgaacaagttaaattaagcacccctgcagacaacgatgat
caagcagcaacttcaaatgtgagcgaaccccagaacagcacaaataactcacaaaatcct
gtcagtacaacaaaatctcagactttaccaggggcatcaactctgaatggttcacacagt
agcacgccatccacatcaccactaaacctttcctcatcaagaaattcacagggttacacg
tacacagcagagggtgtacaagaagagccacaaatagaacctcttgacctttcgctacca
aagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagtgtt
tattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaaggac
aacagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatcccata
aatattgctatacctacagtcactgcccaattacctacaattgttgccattgctgaccag
aacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattccacag
gtggcttatacatactctgctacagttagtcctgcagttcatgagacaccaccaaaacag
atccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaatatccaat
ttagaagatcaaaatgattctgattcaacacccccaaagaaaaaaatgagaaagacagaa
aatgggatgtatgcgtgtgatttgtgtgacaaaatattccagaagagcagctcattattg
agacataagtatgaacacacaggtaaaagacctcacgagtgtggaatctgtacgaaagca
tttaaacacaaacaccatttgatcgaacacatgcgactgcattctggggaaaagccctac
caatgtgacaagtgtggaaagaggttttcccactcgggctcttactctcagcacatgaac
catcgctactcctactgcaaaagggagcctgaggagcgcgacagcgccgagcccgaggag
ctgggccccgaggcgctgagcagcgagcacgccgtgcccagggagtccccctcgcagatc
gactcagatgagagggagagcctaaccagggaggaggaggaattcagtgaaaaagaggaa
gaggaggaggaagaaaaagacatagagggacttcaggaagaaaaagaatgtagggaacca
caagaagaagggcatgtggaagaagtagcggcagtagaagaggaagaagggaaaattgaa
ggtgacaagaatgatgaagttgtaaatcaagcaagcaatgcagaaccagaagttatacaa
aataatgggcaggtatcagaagaaaataatgaataa
DBGET
integrated database retrieval system
