Geospiza fortis (medium ground-finch): 102039683
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Entry
102039683 CDS
T03755
Symbol
CNGA1
Name
(RefSeq) cyclic nucleotide gated channel alpha 1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102039683 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102039683 (CNGA1)
Ion channels [BR:
gfr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102039683 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
Connexin
Presenilin
SlyX
CIS_TMP
RNA_pol_Rpc4
Menin
CDC45
Sec62
Motif
Other DBs
NCBI-GeneID:
102039683
NCBI-ProteinID:
XP_005415698
UniProt:
A0A6I9HBZ4
LinkDB
All DBs
Position
Un
AA seq
652 aa
AA seq
DB search
MKVGVIETHHSHTIVPSVVVHDTSKDHGLMYEGENRYVKYILCRQQYPPGVFACYNINNN
SNKDEXKKRKKEKKSKPEKKKDGETQKTKEKKEKNKNKDKLKKKENTEEKKKDIFTIDPA
GNIYYNWLFCITMPVMYNWTMIIARACFDELQHDYLVAWFIIDYVSDAIYVADMFVRTRT
GYLEQGLLVKEEHKLREKYKRSFQFKLDFLSILPTDLLYFKLGLNYPELRINRLLRVARM
FEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPE
FARLTRKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMIS
NMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKL
RAEIAINVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKE
GKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDL
MEALTEYPDAKAMLEEKGKQILMKDGLLDIEIANLGSDPKDLEEKVAYMERAMDRLQTKF
ARLLAEYEGAQQKVKKRLTQIEKILKPVIEEEFADLEEADPSTDKPGLSKAE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcactcccatacaattgttcccagtgtggtagtg
catgacaccagtaaggaccatggactgatgtacgaaggggaaaacaggtatgtcaaatat
attttgtgtaggcaacaatatccacctggagtatttgcatgctacaatattaacaataat
agtaataaagatgagtaaaagaaaagaaaaaaagaaaagaagagcaagccagaaaaaaaa
aaggatggagaaacacaaaagaccaaagaaaaaaaggagaaaaataaaaataaagataag
ttgaagaagaaagaaaatacagaagagaagaagaaagatattttcaccattgatccagca
ggaaatatatattacaactggttgttttgcatcacaatgcctgtcatgtacaactggacc
atgattattgctagagcctgttttgatgagcttcagcatgattacttagtggcatggttt
attattgattatgtttctgatgccatttatgttgctgatatgtttgtacggacaaggaca
ggttacctggagcaaggtcttctggtgaaagaagaacataagctacgagagaaatacaag
agatcttttcaattcaaactagattttctgtcaatcttaccaactgatctcttatacttt
aagttaggattgaattacccagaattaagaataaacagactactcagagtagctcggatg
tttgaattcttccagagaacagaaacaagaacaaactacccaaatatcttcaggatctct
aaccttgtcatgtacattgtgattattattcactggaatgcctgtgtatactactccatc
tcaaaagccattggatttggggctgacacgtgggtctaccccaacacctcagatcctgaa
tttgcccgcctgactagaaaatatgtctacagtctctactggtcaacactgaccctgact
actattggtgaaaccccccctcctgtaagagattctgagtatttttttgtggtcgttgac
ttcttggttggagtactgatctttgctaccatcgttggtaacgtgggctcaatgatctcc
aacatgaatgctgccagggcggagttccaagcaaggattgatgctatcaagcagtatatg
cattttcggaatgtgagtaaggacatggaaaaaagagttataaagtggtttgactacctg
tggacaaacaaaaaggctgtggatgaaagggaagtcttgaagtatctgccagataaacta
agagcagagattgcaatcaatgttcacctggaaacgctaaaaaaagttcggatttttgca
gactgtgaagcaggtttgctggttgaactggttttgaaactccagccccaagtatacagt
cctggagattatatttgcagaaaaggagatattggacgagagatgtacattatcaaagaa
ggcaagctggcagtagttgctgatgatggaattacccaatttgtggtcctaagtgatggc
agctacttcggagaaatcagcattcttaacatcaagggtagcaaagctggcaatcgaaga
acagccaatattaaaagtattggatactcagacttgttttgtttgtctaaggatgatctc
atggaggctttaacagagtatccagatgcaaaggctatgctggaagaaaaaggcaagcaa
atcctaatgaaagatgggttactggacattgaaattgcaaatttaggaagcgatcctaaa
gatctggaagagaaggtcgcctacatggaacgtgctatggacaggttgcaaacaaagttt
gccaggttgttggctgagtatgaaggtgcacaacagaaagtgaaaaaaagacttacgcaa
atagagaaaatattgaagccagttatagaggaagaatttgcagacttagaagaagcagat
ccatccacagataaacctggattgtcaaaagcagaataa
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