Geospiza fortis (medium ground-finch): 102039719
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Entry
102039719 CDS
T03755
Symbol
NFX1
Name
(RefSeq) nuclear transcription factor, X-box binding 1
KO
K12236
transcriptional repressor NF-X1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102039719 (NFX1)
04121 Ubiquitin system [BR:
gfr04121
]
102039719 (NFX1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102039719 (NFX1)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
102039719 (NFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
102039719
NCBI-ProteinID:
XP_005427320
UniProt:
A0A6I9HPA9
LinkDB
All DBs
Position
Un
AA seq
1132 aa
AA seq
DB search
MAEARPGSGTLNFSPGAAASVSGEGQPTDINWVNKDRKDSNSNQNRSKIPIPSLYSERGT
DHESSSTKHHGFCNLESQYGNSEDFHQYFGTSKSLKNRSLQSQRLHRLRNDSTCARNKTR
QSTSDTAAGPGISDAALVPGRRAPPRGYSDFLSSESDREVLNADSRGAKPKKTHLIHVSG
RGFREKGKQIHDREKRMSSKQKVELFENFPSLDLTQSDSSESSIGKAFCDAPFGSGDEQK
GYNNVNKRYPRKPVWNKPPVEKECQKRHDSHRIKNSKVGKKSSVAYTPKDKNERKKELLA
HKNDENLTSEIRHQLSESLRFSGRNFLLKGDQVPSLHFSWTQYWKKQSDVPKNKETHTGS
LIEQLTTEKYECMVCCEVVRIVAPVWSCQNCYHVFHLNCIKKWARSPASQAEDGNSGWRC
PACQNASVQVPKTYTCFCGKVHNPEWNRNEIPHSCGELCGKKRQCLDCPHLCNILCHPGP
CPSCPAFVTKTCECGQTSHSVRCGQSTKIHCSNVCGNTLNCGKHSCTQVCHSGKCSPCQL
TVQQVCYCGSNFKEVLCGSKEEFSDGFGSFSCQNICGKKLNCGRHNCKQVCHPQPCQLCP
RLPQVVYRCPCGQTPLSKLLELGCVERKICTDPIPSCGKTCGKPLSCGSYEFIHTCESLC
HEGDCRPCSHTSNIFCRCGFKKKEIPCALLRNKAAITFMCDKRCNKKRSCGRHKCNEVCC
VDTEHKCSLVCGRKLNCGLHRCEEPCHRGSCQTCWQTSFDELTCYCGESVIYPPVPCGTQ
PPECKKTCTRPHDCDHPVYHSCHSEEKCPPCTYLTQKWCMGKHELRSNIPCHLTDISCGL
RCNQMLKCGMHKCKRICHKGECLIDEECKQPCIIPRLYCNHPCMAPCHPSSHCPTTSCCA
KVDLQCECGRRKESMICSEASNTYQRIAAISIATKLTDLQLGDSVEISRLITKKEMKQAR
LQCDEECLAIQRNRRLAEALEIDDNSDPFKIRSSGPKYSDLLKEDARKDIKFVSDIEKEM
RMLVEAVNKGKHTKKSHCYPPMNRDHRRIIHELAQVYGIESVSYDNEPKRNVVITAVKGK
SVCPSNTLTSVLDKEMQSRPAPPLLHYKQTDKTSGNKPLKEEPVIDYFDVQD
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcggcccggctcaggtacattgaatttcagccctggtgctgctgcttcc
gtttctggagaaggacaaccaacagatataaactgggtaaataaagataggaaagactct
aacagtaatcagaatagaagtaagataccaattcctagtctgtattctgaaagaggtaca
gatcatgaaagctcttccacaaagcatcatggcttttgtaatctggaaagtcagtatggg
aattctgaagacttccaccaatattttggtactagtaaaagtttgaagaatcgcagcttg
caaagccagagattgcatagattaagaaatgatagcacatgtgctagaaataagacaagg
caaagtactagtgatacggctgcaggtccaggcatttcagatgctgcgctagtacctggt
agaagagcacctcctagaggatacagtgattttctctcctcagagagtgacagggaagta
cttaatgcagatagcagaggggcaaagccgaagaaaacacatctgatacatgtatctggg
agaggttttagggaaaagggaaagcagatacatgaccgtgaaaagcggatgagctctaaa
cagaaagtagagctgtttgaaaattttccatctttggatttgacgcagtctgactcttca
gaatcgtccattggaaaggcattctgtgatgcaccttttggaagtggggatgagcaaaaa
ggctacaataatgtaaacaaaagatatccccggaagcctgtgtggaataaacccccagta
gaaaaggagtgtcagaaaagacatgattctcaccgtattaaaaattcaaaagtaggtaag
aagtcttctgttgcatatactccaaaagataaaaatgaaaggaagaaagaactccttgct
cacaaaaatgatgaaaacttgaccagtgaaatcagacatcagttgtctgagtctctcagg
ttcagtggaagaaatttcttgctaaaaggggatcaagtaccttcacttcatttcagctgg
acccagtactggaagaagcaaagtgatgtaccaaaaaacaaagaaactcatacagggtca
ttgattgaacagctgaccacagagaagtatgagtgcatggtatgctgtgaggtggtccga
atagtagccccagtgtggagctgtcagaattgttaccatgtattccacctgaattgcatc
aagaaatgggcacgatcaccagcttcacaagctgaagatggcaatagcggttggagatgt
ccggcttgtcagaatgcttctgtgcaagttcctaaaacttacacttgtttctgtggtaag
gtgcacaatcctgaatggaatagaaatgaaatcccacatagctgtggggaactttgtgga
aagaagaggcagtgtttggactgtccacatctttgcaacattctgtgccacccaggaccg
tgcccttcgtgcccagcctttgtgacaaaaacatgtgaatgtggacaaacaagtcattca
gttcgctgtggtcaatcaacaaaaattcattgttctaatgtatgtggaaatactttaaac
tgtggaaagcacagctgtactcaagtgtgccactcgggaaaatgttcaccttgccagtta
acagtacagcaagtgtgttactgtggaagcaacttcaaagaagtattgtgtggatcaaag
gaagaattctctgatggttttgggagtttctcatgtcagaatatatgtggcaaaaaatta
aattgtgggagacacaactgtaagcaagtatgccatcctcagccttgccagctctgtcca
cgacttccacaagttgtgtatcgttgtccctgtggtcagactcctctcagcaagttactg
gaactaggatgtgttgaacgtaaaatttgcacagatcctatcccatcgtgtggaaaaaca
tgtggcaaacctctttcttgtggtagctatgagttcattcatacatgtgaaagcctttgc
cacgaaggagactgtagaccatgttctcacacatcaaatattttttgtaggtgtggcttc
aaaaaaaaggaaatcccatgtgctcttctcagaaataaagctgctattacattcatgtgt
gacaagcgatgcaacaagaagagatcatgtggacgacacaagtgtaatgaagtttgctgt
gtggacacagaacataagtgctctttggtttgtggtcgtaaactcaactgtgggcttcat
agatgtgaagaaccctgccatcgcggcagttgtcaaacgtgctggcaaacaagttttgat
gagttgacttgttattgtggtgaatctgtgatttacccccctgttccctgtggcactcag
ccaccagagtgtaaaaaaacatgcaccaggccacatgactgtgatcatccagtgtaccat
tcatgtcatagtgaggagaaatgtcccccctgtacctatctcactcagaaatggtgtatg
ggcaagcatgaactgcgaagtaatattccttgtcatctcactgacatttcctgtggactt
cgctgcaatcaaatgttaaaatgtggaatgcacaaatgtaaaagaatttgtcataaagga
gaatgtcttatagatgaagaatgtaaacagccatgtattattccaaggctatattgtaat
catccatgtatggccccgtgtcatccttcttcacactgcccgacaacatcctgctgtgca
aaggttgatcttcagtgtgagtgtggaagaagaaaagaaagtatgatatgctccgaagca
tctaatacatatcaaagaatagctgctatatctatagcaactaagctaaccgatctacag
cttggggattcagtggaaatcagtaggcttattacgaaaaaagaaatgaaacaagccagg
ttgcaatgtgacgaagaatgcttagctattcagaggaacaggcgccttgctgaagccctt
gaaatagatgataattctgatccttttaaaatccgttcctctggaccaaagtacagtgac
cttttaaaagaagatgcaaggaaggatataaaatttgtcagtgacattgagaaggaaatg
agaatgcttgtggaagctgtgaataagggcaagcacacaaagaagagtcattgttaccca
ccaatgaacagagatcaccgcagaatcatccatgaattagctcaggtttatggcattgaa
agtgtgagctatgacaacgaaccaaagcgcaatgttgttatcactgcagtgaaagggaaa
tccgtttgtccaagcaataccttaacttctgtgctagataaagaaatgcagagcaggcct
gcacctcctcttcttcattacaaacaaacagataagactagtggaaacaaaccattaaag
gaagagccagtaattgactactttgatgtccaggactga
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