Geospiza fortis (medium ground-finch): 102039854
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Entry
102039854 CDS
T03755
Symbol
PAX2
Name
(RefSeq) paired box 2
KO
K15608
paired box protein 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102039854 (PAX2)
04131 Membrane trafficking [BR:
gfr04131
]
102039854 (PAX2)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102039854 (PAX2)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
102039854 (PAX2)
Membrane trafficking [BR:
gfr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
102039854 (PAX2)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
102039854 (PAX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
HTH_28
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
102039854
NCBI-ProteinID:
XP_005416562
LinkDB
All DBs
Position
Un
AA seq
370 aa
AA seq
DB search
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIVPSTASPPVSSASND
PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEA
LDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQ
TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEA
XXXGSATLHY
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcactgcaaagcagaccccttctcagcaatgcacccagggcacgggggtgtg
aaccagctcgggggggtgtttgtgaacggcaggcccctacctgatgtggtgagacaaagg
atagtggagctggctcaccagggggtgcgaccctgtgacatttccaggcagctgcgggtc
agccacggttgtgtcagcaagatcttgggcaggtattacgagacgggaagcatcaagccc
ggcgtgatcggaggctccaaacccaaagtggccacccccaaagtagtggataaaatcgcc
gagtacaaaagacaaaacccgacaatgttcgcctgggagatccgggacaggttattggcc
gagggcatctgcgacaacgacacggtccccagcgtctcctccataaacaggatcatcaga
accaaagttcagcaaccttttcacccaacaccagatgggagtgggacaggtgtgactgca
ccaggacatactattgtgcccagcacagcatcccctcctgtctccagtgcctccaatgat
ccagtgggctcttactccattaacgggatcctggggattcctcggtcgaatggcgagaag
aggaaacgtgatgaagatgtatccgagggctcagttcccaatggagattcccagagcagc
gtggacagtttgcggaagcaccttcgtggcgacactttcacccagcagcagctggaagct
ttagatcgagtttttgagcgtccttcttaccctgacgtctttcaaacatcagagcacatc
aaatctgagcagggtaatgagtactccctcccagctctgacccctggtctcgatgaagtc
aaatcaagtctatccacctctgctaacccagacctggggacaaatgtgtcaggaccccag
acgtaccctgtggtgaccggtcgtgatatggcaagcaccaccttgcctggctacccaccc
catgttcccccaactggacaaggcagctacccaacatcaactcttgcaggaatggttcct
gggagcgagttctcagggaatccctacagccaccctcagtacacgacctacaacgaggcn
nnnnnnnnnggttcagcaaccctgcattactaa
DBGET
integrated database retrieval system
