KEGG   Geospiza fortis (medium ground-finch): 102039924
Entry
102039924         CDS       T03755                                 
Symbol
EXOSC8
Name
(RefSeq) exosome component 8
  KO
K12586  exosome complex component RRP43
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102039924 (EXOSC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gfr03019]
    102039924 (EXOSC8)
Messenger RNA biogenesis [BR:gfr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102039924 (EXOSC8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 102039924
NCBI-ProteinID: XP_005420899
LinkDB
Position
Un
AA seq 283 aa
MGSVLRGCGAPDVTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGSALVKL
GNTTVICGVKAELAPPAVDSANKGYIVPNVELPSLCAERFRSGPPGEEAQAASQFIADVI
ENSQMIVKEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKNVQLPLVTINEE
TGLSEVNLKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLC
SVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIKSITPK
NT seq 852 nt   +upstreamnt  +downstreamnt
atggggtcggtgctgcggggctgtggagcccccgacgtaactgtggaaccattggaatat
tacaggaggtttttgaaagagaactgccgacctgatggaagagagttaggtgaatttcgg
acaaccactgtcaacataggttcaattacaactgcagatggttctgccctggtgaagtta
ggaaataccacagtgatttgcggagtaaaagcggaacttgctccacctgcagtggattct
gctaataagggatacattgttccaaatgtggagctgccatccctctgtgcagagaggttt
cgctctggaccacctggtgaagaggctcaagcagcgagccagttcattgcagatgtgatt
gaaaattcacagatgatagtgaaagaagatctgtgtattgccaatggcaagcttgcgtgg
gtgctatactgtgatatcatatgtctggactatgatggaaaccttctggatgccagtgtc
tttgctttgttggcagcattaaaaaatgtgcaattgccgttggttacgataaacgaagaa
actggtttatcagaagttaatttaaaacagaagaatcctttgattatcagaaagcatccg
gttgccacatcatttgctatatttgatgacacattactcattgttgatccaactgctgaa
gaagaagatttagcaactggaacagtaaccattgtaactgatgaagaaggcagactgtgt
tctgtccataaaccaggtggaagtcctcttacaggagccaagcttcaggattgtatcacc
agagcaattacaagacacaaagaagtaaagaagctcatagacaaagtaataaaaagtata
acacccaagtga

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