Geospiza fortis (medium ground-finch): 102039924
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Entry
102039924 CDS
T03755
Symbol
EXOSC8
Name
(RefSeq) exosome component 8
KO
K12586
exosome complex component RRP43
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102039924 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102039924 (EXOSC8)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102039924 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102039924
NCBI-ProteinID:
XP_005420899
LinkDB
All DBs
Position
Un
AA seq
283 aa
AA seq
DB search
MGSVLRGCGAPDVTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGSALVKL
GNTTVICGVKAELAPPAVDSANKGYIVPNVELPSLCAERFRSGPPGEEAQAASQFIADVI
ENSQMIVKEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKNVQLPLVTINEE
TGLSEVNLKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLC
SVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIKSITPK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggggtcggtgctgcggggctgtggagcccccgacgtaactgtggaaccattggaatat
tacaggaggtttttgaaagagaactgccgacctgatggaagagagttaggtgaatttcgg
acaaccactgtcaacataggttcaattacaactgcagatggttctgccctggtgaagtta
ggaaataccacagtgatttgcggagtaaaagcggaacttgctccacctgcagtggattct
gctaataagggatacattgttccaaatgtggagctgccatccctctgtgcagagaggttt
cgctctggaccacctggtgaagaggctcaagcagcgagccagttcattgcagatgtgatt
gaaaattcacagatgatagtgaaagaagatctgtgtattgccaatggcaagcttgcgtgg
gtgctatactgtgatatcatatgtctggactatgatggaaaccttctggatgccagtgtc
tttgctttgttggcagcattaaaaaatgtgcaattgccgttggttacgataaacgaagaa
actggtttatcagaagttaatttaaaacagaagaatcctttgattatcagaaagcatccg
gttgccacatcatttgctatatttgatgacacattactcattgttgatccaactgctgaa
gaagaagatttagcaactggaacagtaaccattgtaactgatgaagaaggcagactgtgt
tctgtccataaaccaggtggaagtcctcttacaggagccaagcttcaggattgtatcacc
agagcaattacaagacacaaagaagtaaagaagctcatagacaaagtaataaaaagtata
acacccaagtga
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