Geospiza fortis (medium ground-finch): 102039925
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Entry
102039925 CDS
T03755
Symbol
NHLRC1
Name
(RefSeq) NHL repeat containing E3 ubiquitin protein ligase 1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102039925 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102039925 (NHLRC1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102039925 (NHLRC1)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102039925 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Motif
Other DBs
NCBI-GeneID:
102039925
NCBI-ProteinID:
XP_005421065
UniProt:
A0A6I9HH81
LinkDB
All DBs
Position
Un
AA seq
245 aa
AA seq
DB search
MEYISYEDSGFCLRRFGERGDASNDIKYALDVTVTSDGHVVVTDGGDCSVKAFDSEGRGV
LAVREGFCLPWGLDATAKSEVILTDSEAGALYRLAADFQRGELKKCQMIRSRLVSPRAVA
VCRSSGAVVVVEHLKARGASKGSTRVTIFSAEMDLIGQMDSFGLNLVFPSRIYATAVAFD
REGRVIVTDVCSQAVICLGKPEEFPSFNPLISHGLSYPVGLTYTANNSLVVLDSGDHSVK
VYSSA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggagtacatctcctatgaggacagcgggttctgcctgcggcggttcggggagcggggg
gacgcgagcaacgacatcaagtatgcgctcgatgtgacggtcacgtcggacggacacgtg
gtggtcaccgacggcggggactgctccgtgaaggccttcgattctgagggaaggggagtc
ctggccgtccgggaaggcttctgtttgccatggggcttggatgccaccgccaagagcgaa
gtgatcctgaccgactcggaggctggcgcgctgtaccgcttggcggccgacttccaaagg
ggggaattaaagaagtgtcagatgatccggtcccgtcttgtcagccccagagctgttgct
gtctgccggagctcgggtgctgtcgtggtagtagagcacctgaaagctcgaggagcgagc
aagggcagcacccgagtgacgatattcagtgcggagatggatctcatcggccagatggac
agcttcggtctgaacctcgttttcccctccagaatatatgctacggctgtggcctttgac
agagaaggtcgtgttatagtgacggatgtttgtagccaggctgtcatatgcttagggaaa
cctgaggaatttcccagctttaaccctctgattagccacgggctttcttacccggtcgga
ctgacttacacagcaaacaattccctcgtcgttttagacagcggtgatcattcagtgaaa
gtatatagctctgcctga
DBGET
integrated database retrieval system
