Geospiza fortis (medium ground-finch): 102039927
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Entry
102039927 CDS
T03755
Symbol
KCNT1
Name
(RefSeq) potassium sodium-activated channel subfamily T member 1
KO
K04946
potassium channel subfamily T member 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102039927 (KCNT1)
Ion channels [BR:
gfr04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
102039927 (KCNT1)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
Ion_trans
UPF0669
Motif
Other DBs
NCBI-GeneID:
102039927
NCBI-ProteinID:
XP_014162577
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All DBs
Position
Un
AA seq
1157 aa
AA seq
DB search
MARAKLKNSPSESNSHVKTVPAGTTEDVHGVSPLLPSRRMGSMGSDVGQRPHAEDFSVDS
SFSQXXXXFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDNPEE
GIGCWECEKQNYTAFNQSTNINWSHIFWVDRKTPLWAVQVSIALISFLETMLLTYLSYKG
NIWEQIFRISFILEMINTVPFIITIFWPPLRNLFIPVFLNCWLAKYALENMINDLHRAIQ
RTQSAMFNQVLILICTLLCLVFTGTCGIQHLERAGEKLSLFKSFYFCIVTFSTVGYGDVT
PKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEKHVVLCVSSL
KIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYLQGSALKDQD
LMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVK
FADHVVCEEECKYAMLALNCVCPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEV
YHIRMGDSKFFMEYEGKSFTYAAFHAHKKYGVCLIGIRRGTVAMDLQNTECRPANSSKLA
LPAENGSGTRRPSIAPVLELADTSSLLPCDLLSDQSEDEMTQSDEEGSAVLEYVKGYPPN
SPYIGSSPTLCHLLPEKAPFCCLRLDKGCKHNSFEDAKAYGFKNKLIIVSAETAGNGLYN
FIVPLRAYYRSRKELNPIVLLLDNKPEHHFLEAICCFPMVYYMEGTIDNLDSLLQCGIIY
ADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSIITELTHPSNMRFMQFRAKD
SYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMITITRLLL
GLDTTPGSGYLCAMKITEDDLWIRTYGRLFQKLCSSSAEIPIGIYRTESHMFATSEPHDI
RAQSQISINVEDCEDTKDVKEHWGIKTSHHRNSCSSDQSEHPLLRQELAVAEWPLRLQQG
PVSPHSPVCAPLSGRAEMVVQDSPTPEDVANLTASDVMNRVNLGYLQDEMNDHQNTLSYV
LINPPPDTRLELNDIVYLIRSDPLAHVANDGHSKRAACSNRRHCCLVFLFFLGVWFKICG
KMWFKLRLKAALPNFNF
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagccaagctgaagaattccccttcagagagcaattcccatgtcaaaaccgtc
ccagcaggcacgacagaagatgtgcacggggtgagccccttgttaccgtctcggaggatg
ggatccatggggagtgatgtcggacaaaggcctcacgccgaggatttcagcgtggattcc
tccttctcacagnnnnnnnnnnnnttctacgtgaatgaaaacaccttcaaggagcggctg
aagctcttcttcatcaaaaaccagcgatcgagcctgaggatccggctcttcaacttctcc
ctgaagctgctgacgtgcctgctgtacatcgtgcgagtgctgctggacaaccccgaggag
ggcatcggctgctgggaatgtgagaagcagaattacacagccttcaaccagtccaccaac
atcaactggtcccacatcttttgggtggacaggaaaacccctctgtgggccgtgcaggtc
agcatcgccctcatcagcttcctggagaccatgctgctcacctatctcagctacaagggg
aacatctgggagcagatttttcgcatttccttcatcctggagatgatcaacacggtgccg
ttcatcatcacgatattctggcctcctttgcggaatttgttcattcctgtgtttctgaac
tgctggctggccaagtacgccctggagaacatgattaacgatctgcaccgagccatccaa
aggacacagtcagcaatgttcaaccaggtgctcatcctcatctgcaccctcctgtgtctc
gttttcacggggacctgcggcatccagcacttagaaagagcaggtgagaagctctccctc
ttcaagtccttctatttctgcatcgtcaccttttccaccgtgggctacggagacgtgaca
ccaaagatctggccttcccagctgctcgtggtgatcatgatctgcgtggccctggtggtg
ctgcctctccagttcgaggagctggtgtacctgtggatggagcggcagaagtcggggggc
aactacagccggcaccgcgcgcagaccgagaagcacgtggtgctgtgcgtcagctccctc
aagatcgacctcctcatggacttcctcaacgagttctacgcccaccctcgcctgcaggat
tactacgtggtgatcctgtgccccacggagatggacatccaggtgcggcgcgtgctgcag
atccccctgtggtcccagagggtcatctacctccagggctctgcactcaaggaccaggac
ctgatgagagccaagatggacaatggagaagcttgcttcatcctcagcagccggaacgag
gtggacagaacagcagctgaccaccagaccatcctgagggcctgggctgtcaaagacttt
gctccaaactgtcctctctacgttcagatcttaaagccagaaaataaattccatgtcaag
tttgcagatcacgttgtgtgtgaggaggagtgcaaatacgccatgctggccctgaactgt
gtctgccctgccacctccaccctcatcacgctgctggtgcacacctcccgtggccaggag
ggccaggagtctccggagcagtggcagcggatgtacgggcgctgctcgggcaatgaggtc
tatcacatccgcatgggggacagcaagttcttcatggagtacgagggcaagagcttcacc
tacgccgccttccacgcgcacaagaagtacggtgtctgcctgatcggcatccgcaggggt
acagtggccatggacctgcagaacaccgagtgccgccctgccaacagcagcaagctggcc
ctgcctgccgagaacggctcgggcacgcgccggcccagcatcgccccggtgctggagctg
gctgacacctcctccctgctgccctgcgacctcctcagcgaccagtccgaggacgagatg
acgcagtcggacgaggagggctcggcagtgctcgagtacgtgaagggctaccccccaaac
tcgccctacatcgggagctccccgaccctgtgccacctcctgcccgagaaagccccgttc
tgctgcctgaggctggacaagggctgcaaacacaacagctttgaggacgccaaggcctac
gggttcaagaacaagctgatcatcgtttctgcagagacagcggggaacggcctctacaac
ttcatcgtcccgctgcgcgcctactaccgctcccgcaaggagctcaaccccatcgtgctg
ctgctggacaacaagcctgagcaccactttctggaggccatctgctgtttccccatggtt
tactacatggagggcaccattgacaacctggacagtttgctgcagtgtggcatcatctac
gctgacaacttggtggtggtggacaaggagagcaccatgagtgccgaggaggactacatg
gcagatgccaagaccattgtcaacgtccagaccatgttcaggctcttccccagcctcagc
attatcacggagctgacccacccctccaacatgaggttcatgcagttcagagcaaaggac
agttactctctggccctttccaagctagaaaagagagagcgagagaacggctccaacctg
gccttcatgttccggctgcccttcgccgccgggagagtcttcagcatcagcatgttggac
acgctgctctaccagtcattcgtgaaggattacatgatcaccatcactcggctgctgctg
ggcctcgacaccacgccaggctccgggtacctctgtgcgatgaagatcactgaggacgat
ctgtggatccggacgtacggacgcctgttccagaagctctgctcctccagtgccgagatc
cccattgggatctacaggacggagtcgcacatgttcgccacctccgagccccacgacatc
cgagcgcagtcacagatctcaatcaatgttgaggactgcgaggacaccaaggatgtcaag
gagcactggggcatcaagacgagccaccaccgcaactcgtgctccagcgaccagtccgag
caccccctgctgcggcaggagttggcagtggcagagtggcccttgcgcctgcagcagggc
ccggtgtccccacacagccccgtttgtgccccactttctggccgtgcagagatggtggtt
caggacagcccgaccccagaggatgtagcaaatttaacagccagtgatgtgatgaatcgg
gtaaacctgggatatttgcaagatgagatgaacgaccaccagaacaccttgtcctacgtc
ctgatcaacccccccccggacacgcggctggagctcaatgacatcgtgtacctgatccgc
tccgaccctctggcccacgtggccaacgacggccacagtaaaagagctgcatgcagcaac
aggagacactgctgtctggtttttctgttttttctgggagtctggtttaaaatctgtggg
aagatgtggtttaagctgaggctcaaggcagctcttcccaactttaatttttaa
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