Geospiza fortis (medium ground-finch): 102039973
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Entry
102039973 CDS
T03755
Symbol
ABCE1
Name
(RefSeq) ATP binding cassette subfamily E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102039973 (ABCE1)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
102039973 (ABCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
Fer4_6
AAA_15
RsgA_GTPase
AAA_29
AAA_16
VapE-like_dom
nSTAND3
NACHT
Fer4_10
AAA_30
Rad17
Fer4_2
AAA_23
Fer4_21
TsaE
SRP54
ORC-CDC6-like
AAA_24
Fer4_4
Fer4_16
Fer4_7
AAA_5
Fer4_3
AAA_19
Fer4_9
Motif
Other DBs
NCBI-GeneID:
102039973
NCBI-ProteinID:
XP_005418162
UniProt:
A0A6I9HE42
LinkDB
All DBs
Position
Un
AA seq
599 aa
AA seq
DB search
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTSQNKIAWISETLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGSILDRKDETKTQTVVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELSIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLTPDEGGEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
KNTLANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaattaacaagaattgctatagtcaaccatgacaaatgtaagccaaagaaa
tgtcgtcaggaatgcaagaagagttgtcctgtggttcgaatgggaaaactttgcatagaa
gttacatcacagaacaaaatagcatggatttcagaaacactttgtattggttgtggtatt
tgcatcaagaaatgtccttttggagccttgtcaattgttaacttacctagcaacctggag
aaagaaacaacacatagatactgtgccaatgccttcaaacttcacaggttgcctatccct
cgtccaggtgaagtactgggtttggttggaaccaatggtattggaaaatcaactgccttg
aaaattttagcaggaaaacagaagccaaatcttggaaaatatgatgatccacctgactgg
caagaaattttgacttacttccgaggatctgaattacagaattattttaccaagatcctg
gaagatgaccttaaagctataattaaacctcagtacgtggaccagatacctaaagctgca
aagggaacagtgggatcaattctggacaggaaggatgaaactaagacacaaactgttgtg
tgtcagcagcttgacttaacacatctgaaagaaagaaatgttgaggacctttcaggagga
gaacttcagagatttgcttgtgcagttgtttgcattcagaaggctgatatcttcatgttt
gatgaaccttccagctacttggatgtcaagcagcgcttgaaggctgccattactatccgg
tccctcataaaccctgacaggtacattattgttgtagagcatgatctaagtgtattagat
tatctctctgactttatctgctgcctgtatggtgtgccaagtgcttatggtgttgttacc
atgcctttcagcgtaagagaaggcataaatattttcctagatggctatgttccaacagaa
aatctaaggtttcgagatgcatctctggtatttaaagtagccgagacagctaatgaagaa
gaggttaaaaagatgtgcatgtacaaatatccaggaatgaaaaaaaagatgggagagttt
gaactatccatagtagctggagaattcaccgattctgaaattatggtgatgttaggggaa
aacggaactggcaaaacaacatttatccgaatgcttgcaggaagacttacacctgatgaa
ggaggtgaggtcccagtcctaaatgtcagctacaaaccacagaaaatcagccctaaatct
acgggaagtgtgcgtcagctgctgcacgagaagatcagagatgcctatacacacccccag
tttgtaactgacgtgatgaaacctcttcagatagaaaacatcattgaccaggaggttcag
acgctgtctggtggtgagttgcagcgtgtggcgttagcgctttgtctgggtaaacctgca
gatgtgtatctgattgatgagccctcagcttacctggactctgaacagcgtctgatggct
gccagagtcattaaacgtttcattctccatgctaaaaaaacagcttttgtggtagaacat
gattttatcatggctacatatcttgctgatcgtgtgattgtttttgatggcattccttcc
aagaacacactggcaaacagtccacagactctcttggctggaatgaataagtttttatct
cagcttgaaatcacttttagaagagaccccaacaattacagaccaagaataaataaactc
aattccatcaaggatgtggaacagaagaagagtggaaactacttcttcctggatgactaa
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