Geospiza fortis (medium ground-finch): 102040080
Help
Entry
102040080 CDS
T03755
Symbol
MBD5
Name
(RefSeq) methyl-CpG binding domain protein 5
KO
K23219
methyl-CpG-binding domain protein 5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102040080 (MBD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102040080 (MBD5)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
102040080 (MBD5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102040080 (MBD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
102040080
NCBI-ProteinID:
XP_014167821
LinkDB
All DBs
Position
Un
AA seq
1370 aa
AA seq
DB search
MNGGKECDGGDTDGGPPAVQVPVGWQRRVDQSGVLYISPSGSLLSCLEQVKTYLLTDGTC
KCGLECPLVLPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEAPH
PSLVLTSPGGGTSATPVVPTRAATPRSMRNKSHEGITNSVMPECKTPFKLMMGASNAMGR
LYVQEMAGSQQAELHPAYPRQRLGSNELGQKSPYRGSHGGMPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNPSFHGAPNSSPIHMTRTPLSPPSVMLHGSPIQSSCAMAGRTNIPLS
PTLTTKSPVMKKPLCNFSADGILDPIPSKPPNQNPVIMNPTTFHSSVHSQVPVMNVSMPP
AVVPLPSNLPLPTVKPAHINHGAHVQRVQHSASTSLSPSPVTSPVHAMAPGIARIEASPQ
RSRSSSTSSDHGNFLLPPVGSSCSGIKVPPRSPRSTIGSPRPSMPSSPSTKHDGLSQYKD
IPNPLIAGMSNVLNPPNNAVFPAASAGSGSLKSQPGLLGMPLNQILNQHNAASFPASSLL
SAAAKAQLANQNKLAGNNNNSSSNSGPVASGGSTEGHSTLNPMFPPAANVLLPTTEGQSG
RAALRDKLMSQQKDPLRKRKQPTTTVLSLLRQSQLDSSGLPKAGSDLIRKPSQSSFPISS
MSQLLQSMSCQSSHGSSNSSSGCGGSSSALPCPGAQLHLAEPALPPGLPCPNPSPRFGPG
AGAPPSNHLAGLLNQMQAGGSCGMLPQAGMALGNSLHPSPAQARLQAPSTPGIPNSIGSS
CNQSSPEAGGLGPSSSIAIAGSSQAAITKTTSVLQDGVIVTTAAGTPLQQGQLPMGGEFP
FAGHEHSLHFPQNSSSNNNLPHPLNQNLLNSLPLSLPVNQQHLLNQNLLNILQPACLAGE
MSSLNTTLNNHQLSHLQSLLNNNQMFPSNQQQQQQQQQHLLQGYQNVQGFQGQPQIPGPA
NNPNPMACLFQNFQVRMQEDAAVLNKRMITQMGMAPVPESSNALLPPFQEPPCELQQRPD
PSLGQQAKDTPTAAGDASVDGARGPKNAEHGKGPGEGDGYEYYKAAACNTPKKQWEGEQS
PVGEMGRWKCEEFLEHSAHVHGSPCHERPNNASALLQGEQHQALLAQRNCQSEKALEENF
RYNNYKRTMMSFKERLENTVERCAHINGNRPQPNRAFGELLNASKQDLILEEQSPSSSNS
LESSLVKDYIHYNGDFNAKSINGCVPSPSDAKSISSEEELRNPESPSSHELIHYRPRTFN
VGDLVWGQIKGLTSWPGKLGREEEVHNSCQQNAEEGKVEPEKLKTLTEGLEAFSRARKRN
RKSGKLNNHLEAAIHEAMSELDKMSGNVHQIPQGDRQVKPPKLKRRKISR
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgggaaggagtgtgacggaggggacacggatggagggccaccagcagtgcaa
gttcccgttggttggcagcggagggtggaccaaagtggagttctctacatcagtcccagt
gggtctttattatcctgcttggagcaggtgaagacttacttgctgactgatggaacgtgc
aagtgtggcctagaatgtcctcttgttcttcccaaggtctttaattttgatcctggagct
gctgtgaagcagagaactgctgaagatgttaaagcggacgaagatgtcaccaaactatgc
attcacaaaaggaaaattattgctgtggctacacttcacaaaagcatggaagcaccacat
ccttcactggttctaactagtcctggtggtggaacaagtgcaacgccagtagttcccacc
cgagcagcaactccaaggtcgatgaggaataaatcacatgaaggaattacaaattctgtg
atgccggaatgtaagactcctttcaagttgatgatgggggcatctaatgccatgggtagg
ctttatgtgcaagaaatggctggaagccagcaagcagagctccatcctgcctatcccagg
cagagattggggagcaatgaactggggcagaagtctccataccgcggcagtcacgggggg
atgcccagcccggcgtcctcagggtcgcagatctacggggacggctccatctcgcccagg
accgacccgctcgggagccccgacgtcttcacgaggaacaatcccagttttcatggagca
cccaactccagtcctatccacatgaccaggacgcctctgtctccgccgtcagtcatgctc
cacggctctcccatacagtcatcctgtgcaatggctggaaggactaatatacctctttcc
cccaccctgaccaccaagagcccggtcatgaaaaaacccctgtgtaacttttcggctgat
ggcatactggaccccattcccagcaaaccgccgaaccagaaccccgtgatcatgaacccc
accaccttccactcgagtgtccactctcaggtacccgtgatgaatgtaagcatgcccccc
gccgtggtgcccctgcccagcaacctgcccctgcccaccgtcaaacccgcccacatcaac
catggcgctcacgtccaaagggttcagcactcggcttcgacgtccctgtccccctcgccg
gtgacgtcccccgttcacgccatggcgcccggcatcgcaaggatcgaggcttctccccaa
agatcgcgttcttcttccacctcgtccgatcatggaaacttcctgctgcctcccgtgggg
tcgtcctgtagcggtatcaaagtccctcccaggtccccgaggtcaaccatagggtcaccg
aggccatccatgccatccagcccttccaccaagcacgacggactcagtcagtacaaggac
atccccaacccgttaattgctggaatgagtaacgtgttaaatcctcccaacaatgcagtt
tttcccgctgcatcggccggaagcggttccttgaagagtcagcctggtttgctgggaatg
cctttaaatcagatcttgaaccagcacaacgctgcctcttttccagcaagcagtttactc
tcagcagcagccaaagcacagctagcaaatcaaaataaacttgctggtaacaacaataac
agcagtagcaattctggacctgttgccagcggcggcagcaccgaaggacacagcacttta
aatcccatgttccctcctgctgccaacgtgctcctccccaccacggaagggcagagcggc
cgggcagcgctgagagataaattgatgtctcagcaaaaggatcctctgaggaaaaggaag
cagcccaccaccacggtgctgagcttgctgagacagtctcagctggacagctctggcctt
cccaaagctgggtccgatttgatcagaaagccaagtcaaagctccttccccatcagctcc
atgtcgcagctcctgcagtccatgagttgtcagagctcccacgggagcagcaatagttcc
tcgggctgcgggggctccagcagcgccctgccctgccccggcgcccagctgcacctggcg
gagcccgcgctgcccccggggctgccctgccccaaccccagcccccgctttgggcccggt
gctggtgctcccccctccaaccacctggcagggctcctcaaccagatgcaggccggcggg
agctgcgggatgctcccccaggcaggaatggccttagggaactccttacatcccagcccg
gcccaggccaggctccaggcaccctccacgccagggatccccaacagcatcgggagcagc
tgcaatcagagcagtcctgaagcagggggtttgggcccgtcgtcatcgatagccatcgct
ggctccagccaagctgccatcaccaagaccacgtcagtgctccaggacggtgtcattgtc
accactgcagctgggacccctctgcagcagggccagctgcccatggggggcgagttcccc
tttgctggccacgaacactcgctccacttcccgcagaacagctcttcaaacaacaatctg
ccacatcctctgaatcagaacctcctcaattccctgcccctctctctgccggtgaatcag
caacatctcctgaaccagaacctcctaaacatcctccagcctgcttgccttgcaggggaa
atgtcatctctgaacactactctgaacaaccatcagctcagccatctccagtcactcctc
aacaacaatcagatgtttccttcaaatcagcagcagcagcagcagcagcagcagcacctt
ctccagggctaccagaacgtgcagggctttcagggccagccccaaattcctggcccagcc
aacaacccaaaccccatggcgtgtctgttccagaatttccaggtgaggatgcaggaagac
gccgccgtcctcaacaaaaggatgatcacccagatgggcatggcgccagttcccgagagc
tccaacgctctccttcctcccttccaggagcccccctgcgagctgcagcagagacctgac
ccctccctgggccagcaggccaaggacacccccaccgccgcgggcgacgcctcggtggac
ggcgcgcggggccccaagaacgcggagcacggcaagggccccggcgagggggacggctac
gagtattacaaagcagccgcctgtaacacgcccaaaaagcaatgggaaggggagcagagc
cccgtgggggagatgggcaggtggaaatgcgaggagttcctggagcactcggcccacgtc
cacggcagcccgtgccacgagaggcccaacaacgcctcggcgctgctgcagggggagcag
caccaggccctgctggcgcagcggaactgtcagagcgagaaggcgctggaggagaatttc
aggtataacaattacaaaagaactatgatgagcttcaaggaaagactggagaacactgtg
gaacgatgtgcacacatcaacgggaaccgcccgcagcccaacagggccttcggggagttg
ctcaacgcttccaaacaagacctgatcctggaagagcaatctcccagttcctccaatagc
ttggagagttccttagtgaaagactacatccattacaatggagattttaatgccaaaagc
attaacgggtgcgtgcccagcccctcggatgctaagagcatcagcagcgaggaggagctg
cggaaccccgagtcgccctcgtcccacgagctcatccactacaggcccaggacgtttaac
gtgggcgacttggtctggggccagatcaaaggactcacttcctggcctggcaaacttggc
agagaagaagaggttcacaattcatgccaacagaacgctgaggaggggaaggtggagccg
gagaagctgaagacgctaacggaggggctggaggcgttcagccgcgccaggaaaaggaac
aggaaaagtggaaagctaaataaccatttagaagctgctatacacgaggccatgagtgaa
ctagacaaaatgtctgggaatgtccaccaaatcccgcagggagacagacaagtgaagcct
ccaaaactcaagaggaggaagatctctagataa
DBGET
integrated database retrieval system
