Geospiza fortis (medium ground-finch): 102040110 Help Entry 102040110         CDS       T03755                                  Symbol CDH1 Name (RefSeq) cadherin-1   KO K05689   cadherin 1, type 1, E-cadherin Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr04371   Apelin signaling pathway gfr04514   Cell adhesion molecules gfr04520   Adherens junction gfr05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:gfr00001]  09130 Environmental Information Processing   09132 Signal transduction    04371 Apelin signaling pathway     102040110 (CDH1)   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     102040110 (CDH1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     102040110 (CDH1)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     102040110 (CDH1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:gfr03036]     102040110 (CDH1)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:gfr04515]     102040110 (CDH1)    04090 CD molecules [BR:gfr04090]     102040110 (CDH1) Chromosome and associated proteins [BR:gfr03036]  Eukaryotic type   Centrosome formation proteins    Other centrosome associated proteins     102040110 (CDH1) Cell adhesion molecules [BR:gfr04515]  Cadherins   Major cadherins    102040110 (CDH1) CD molecules [BR:gfr04090]  Proteins   102040110 (CDH1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_pro Cadherin_4 TM_ErbB1 Motif Other DBs NCBI-GeneID:  102040110 NCBI-ProteinID:  XP_014164031 LinkDB All DBs Position Un AA seq 1178 aa AA seqDB search MKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPE GALPGTSIMQVTATDADDAVETYNGVIAYSILSQEPREPHPQMFTVNRATGTLSVIASGL DRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKTYEAAVPENVAGREV ARLAVTDLDEPGTPAWRAVYSILRGNDGGAFAISTDPATNEGILRTAQGLDYEAKQQFVL HVAVANEVPFVVKLPMATATVTVTVEDVNEAPVFVPPVQLATVSEDVPPGQTLTACTAQD PDKAQGQRIKYVVGHDPAGWLAVHPENGLVTARDHLDRESPFVKNSTYMAVLLAVDDGSP PATGTGTLLLTLLDVNDNGPEAEPRDITVCQRSPQPQLLTVTDRDLPPNTGPFRAELTHV SFVDCGESHRAAFLPDDTRFKVSRDGTVTATRPLQLQQRDITFAVHTWDTVGKRHSAKVT LRQRRHQHRHHERMQQGTVPDVLIFPEHGHGLRRHKRDWVIPPINCPENERGPFPKKLVQ IKSNKDKETKVFYSITGQGADTIPVGVFIIERETGWLEVTKPLDREEKDKYVLYSHAVSA NGQPVEDPMEIIITVTDQNDNRPVFTQQVFVGYIEENAKPGTSVMTVNATDADDAINVNN GIIGYSILSEEPKGAQDMFTINAENGIISVIGTGLDRETTPNYTLIIQAADQEGFGLTNT ATAIIKVTDANDNPPVFDPATYETSVAENEVGVVVARLHVTDQDLPGSPAWQAVYHIRSG DPQGDFEITTDPKTNDGLLKTAKGLDYETQDRYRLVVSVENQAPFTVPLNPATANVLVVV RDVNEAPIFVPPVKRVEVMEDVPVGYQVTSYTAQDPDKDQRQKITYRMGSDPAGWLAIDP ENGIVTAAQPLDRESAHAINSTYKAIILAVDNGSPNYATGTGTLLLVLQDVNDNGPVPEP RSFDICNRQPEEQMLKIIDKDLPPNTHPFKAELMHGSGSNWTASVVQPDEVKLSMKKELE PGEYSIFLKLLDAQGKDQITAVRAQVCSCEGPAKNCERRAYISGGMGVPAILGILGGILA LLILLLLLLLFVRRRKVEKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLDAR PEVIRNDVAPPLMAAPQYRPRPATPHLAELYGGGEEDD NT seq 3537 nt NT seq  +upstreamnt  +downstreamnt atgaaggtgacgcagccgctggaccgcgagcacatcgacaagtaccacctcttctcccac gccgtgtccgagaatgggaagccagtggaggagccaatggagatcattgtgacggtgaca gaccagaatgacaacaagccccagttcacacaggaggtgttcaggggctctgtgccagag ggagctctgccaggcacctccatcatgcaggtgacagccacggatgcagacgatgcagtg gagacctacaacggtgtcatcgcctactccatcctcagccaggagccacgggagccccat ccccaaatgttcactgtcaaccgggccacaggcaccctcagcgtcattgccagcggcctc gaccgggagcgtgtgcgggagtacacactgaccgtgcaggcagctgacctggatggggag ggactgaccaccacagcgctggccgtcatcgagatcgctgatgtcaatgacaacgccccc gagtttgaccccaaaacgtacgaggcggccgtgccggagaacgtggccgggcgggaggtg gcacggctggctgtcaccgacctggatgagcccggcacgccggcctggagagccgtctac tccatcctgcgcggcaacgacgggggagcctttgccatcagcaccgaccctgccaccaac gagggcatcctgcgcaccgcccagggtctggactatgaggccaagcagcagttcgtgctc cacgtggcagtggccaacgaggtccccttcgtcgtgaagctgcccatggccactgctacg gtgacagtcactgtggaggatgtcaatgaggccccggtgtttgtgccgcccgtgcagctg gccacggtgtcagaggatgtgcccccggggcagaccctcacagcctgcacggcccaggac cctgacaaggcgcaggggcagaggatcaagtacgtggtggggcacgaccctgcgggctgg ctggccgtgcaccccgagaatggcctggtgaccgcgcgggaccacctggaccgcgagtcc ccctttgtcaagaacagcacctacatggctgtgctgctggccgtggatgatggctcgccg ccggccacgggcacgggcacgctactcctcaccctgctggatgtgaacgacaacggcccc gaggctgagccacgggacatcaccgtctgccagcgcagcccccagccccagctcctcacc gtcaccgaccgggacctgccccccaacaccggccccttccgcgccgagctcacccacgtg agctttgtggactgtggtgagtcgcaccgtgccgccttcctcccggatgacacgcgcttc aaggtgagcagggatggcactgtcactgccacgcggcccctgcagctccagcagcgggac atcacctttgctgtgcacacctgggacaccgtgggcaagaggcattcagccaaggtgacg ctgcgccagcggcggcaccagcaccgacaccacgagcggatgcagcagggcacagtgcca gacgtgctgatcttcccggagcacggacacggcctccggcggcacaagagggactgggtc atcccccccatcaactgccccgagaacgagcgggggcccttccccaagaagctggtgcag atcaaatccaacaaggacaaggagaccaaggttttctacagcatcacggggcagggagcg gacaccatccccgtgggtgtgttcatcatcgagcgggagacggggtggctggaggtgaca aaacccctggaccgggaggagaaggacaaatacgtgctctactcccacgccgtgtcggcc aacgggcagcccgtggaagaccccatggagatcatcatcaccgtcactgaccagaacgac aaccggcctgtcttcacccagcaagtctttgttggttacattgaggagaacgcaaagccg ggcacatctgtgatgaccgtgaacgctacggatgcagatgatgcgatcaatgtgaacaat ggcatcatcggctactccatcctcagcgaggagcccaagggtgcacaggacatgttcacc atcaatgccgagaacggcatcatcagtgtcattggcacgggactggaccgggagaccact cccaactacacgctgatcatccaggctgcagaccaggaaggctttggcctgaccaacact gccactgccatcatcaaagtcactgatgccaacgacaaccctcccgtcttcgaccctgcc acgtatgagacgtcagtggccgagaacgaggtgggggtggtggtggcccggctgcatgtg acagaccaggacctgccaggctccccagcctggcaagccgtctaccacatccgcagcggg gacccgcagggcgacttcgagatcaccactgaccccaaaaccaacgatgggctcctgaaa actgccaagggcctggattatgagacccaggaccggtacaggctcgtggtgtcagtggag aaccaggcccccttcaccgtgcccctgaatcctgccacagccaatgtcctggtggtggtc agggacgtgaatgaagccccgatcttcgtgcccccagtcaagcgggtggaggtgatggag gatgtgccagtgggataccaggtcacctcctacacagcccaggaccccgacaaggaccag agacagaaaatcacgtatcgcatgggcagtgaccctgcagggtggttggccattgaccct gagaacggcatcgtcaccgcagcccagcccctggaccgggagtcggcacatgccatcaac agcacctacaaggccatcatcctggccgtggacaatgggtcaccaaactatgccaccggc acggggacactgctcctcgtgcttcaggatgtgaatgacaacgggcctgtgccagagccc cggagcttcgacatctgcaaccggcagcccgaggagcagatgctgaagatcatcgacaag gacctgccccccaacacccaccccttcaaggcagagctgatgcatggctctggcagcaac tggactgccagcgtggtgcaaccagatgaggtgaagctgagcatgaagaaggagctggag ccaggcgagtacagcatcttcctgaagctgctggatgcacagggcaaggatcagatcaca gcggtgcgagcccaggtgtgcagctgcgaggggccagccaagaactgcgagcgcagagcc tacatctccggtggcatgggcgtgcccgccatcctgggcatcctggggggcatcctggca ctgctcatcctcctgctgctgctgctgctcttcgtgaggaggaggaaggtggagaaggaa ccactgctcccacccgaggatgacatgagggacaatgtgtaccactatgacgaggagggc ggcggcgaggaggaccaggactacgacctgagccagctgcaccgggggctggacgcccgg cccgaggtgatccgcaatgacgtggcgcccccgctgatggcggccccccagtaccggccc cgcccagccaccccccacctggccgagctctacggcggcggcgaggaggacgattag

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