Geospiza fortis (medium ground-finch): 102040179
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Entry
102040179 CDS
T03755
Symbol
DSCAM
Name
(RefSeq) DS cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gfr04515
]
102040179 (DSCAM)
Cell adhesion molecules [BR:
gfr04515
]
Immunoglobulin superfamily
DSCAM family
102040179 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
I-set
Ig_3
Pur_ac_phosph_N
ig
Ig_2
Interfer-bind
ChitinaseA_N
fn3_2
V-set
DUF6377
ARM_TT21_4th
DUF4446
Motif
Other DBs
NCBI-GeneID:
102040179
NCBI-ProteinID:
XP_005430652
LinkDB
All DBs
Position
Un
AA seq
1112 aa
AA seq
DB search
MVIHLAAGRVVLTKEEFLTFKDKYLMKRTDSWDSVQRTRDVSPQLNQATIIDLHPSSTYN
IRMYAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGII
RGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQ
EIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGEL
GEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKA
AAASASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQY
SVWVVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTV
KWMKDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQ
VPPDQPRLTVSKTTSSSIPLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LETLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLI
GWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCA
EKQAKFATLNYDGSTIPPLIKSVVQSEEGLGTNEGLKMLVTISCILVGVLVLFVMLLIVR
RRRREQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAK
TGPTARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDRA
RSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTDS
LTSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVQG
TSRDLGLGQACLEPQKSRTLKRPTVLEPIPMETSSTRDVQSWQPGAVATLPQREGAELGQ
AQAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggtcatccacttggcagcaggcagggtggtgctgacaaaggaggaattcttgaccttc
aaggacaagtacttaatgaaaaggaccgactcttgggattctgtccagagaaccagagat
gtttcccctcagctaaaccaagccaccatcatcgacctgcacccgtcctccacctacaac
atccgcatgtacgccaagaaccgcatcggcaagagcgaggccagcaacgagctcaccatc
accactgatgaagcagcccctgatggtccacctcaggatgtgcagcttgaacctatatct
tcccagagcatcagagtcacctggaaggctccaaagaagcacttgcagaatggaatcatc
cgtggctaccagataggatatcgggaatacagcgccgggggaaacttccagttcaacatc
atcagcattgacaccacaggggacagtgaggtttatacactgaataacctgaaaaaattc
acccagtatggcatggtggtgcaggcctgtaaccgggctgggattggaccttcttctcag
gaaatcatcaccacaactcttgaggacgtgcccagttgccctccagggaatgtgcaagcc
acggccacgtccccagaaaccatctccatttcctggtcaacactggcaaaggagaccctg
aatgggatcctgcagggattcagggttatctactgggccaacctcttggatggagagctg
ggagagataaagaatgtcactactacccagccatccctggagctggatggtttggaaaaa
tacaccaactacagcatccaggtgttggctttcacccgagctggggatggtgtgaggagc
gagcagattttcacccgcactaaggaggatgttccaggtcctcctgctggagttaaagca
gctgctgcctcggcctccacggtttttgtgtcctggctgcctcccctgaagctgaacggc
atcatcaggaaatacaccgtgttctgctcccacccctaccccacagtgatcagcgagttt
gaagcctctcccgactcattttcctacagaatccccaacctgagccggaaccgccagtac
agcgtgtgggtggtggccgtgacggctgcggggagaggcaacagcagcgagatcatcacc
gtggagccactggccaaagctcctgccaggattctgacgttcagtgggacggtgacaacc
ccctggatgaaggacattgtcctcccctgcaaagccgtgggggaccctgctccaacagtc
aagtggatgaaggatagtaacgggacacccagtctagtgatgattgatgggcgaaggagc
atcttcagcaacggcagctttgtcatcaggactgtgaaagcagaagactctggctactac
agctgtgtggccagcaacaactggggctcagatgaaatcattttgaatttgcaggtacaa
gttccaccagaccagccaagactcactgtatccaaaactacatcttcctctatccctctt
tcctggatacctggagacaatggtggcagttctatccgaggttacatcctgcagtactca
gaggataacagtgagcagtggggcagcttccccatcagccccagtgagaggtcctacagg
ctggaaaccctgaaatgtggcacctggtacaagttcaccctgactgcccagaacggggtg
gggccggggcgcatcagcgagatcatcgaggccaagacgctcggcaaagagccacagttt
tccaaggagcaagagctctttgccagcatcaacaccacgcgggtgaggctgaacctgatc
ggctggaacgacggcggctgccccatcacctccttcaccctggagtaccggccctttggg
accacggtctggaccacggcccagaggacatccctgtccaagtcctacatcctctacgac
ctccaggaggccacctggtacgagctgcaaatgagagtgtgcaacagtgctggctgtgca
gagaaacaagccaaatttgccacgctcaattatgatggcagtacaatccctcccctcatc
aagtcggttgtgcaaagtgaggaagggctggggaccaacgaagggctgaagatgctggtg
accatctcctgtatcttggtgggggtcttggtgctctttgtgatgctgctgatcgtcagg
aggaggaggagggagcagaggctgaagaggctccgagatgcaaagagtttggctgaaatg
cttatgagcaagaacaccaggacatcagacacacttaacaagcagcagcaaacactgagg
atgcacatagacattcccagagcccagctgctgatagaggagagggacaccatggagacc
attgatgacagatccacagttctgctcactgatgctgactttggagagacgtccaagcag
aagtccctgactgtcacccacactgtccattaccagtcggtgtcacaagccacagggcca
ctggtggatgtctctgatgcccggccaggaacaaatcccaccacgaggaggagtgccaaa
accggccccaccgcgcgcaaccgctacgccagccagtggaccctcaacagaccccacccc
accatatcagcccacaccctcaccacagactggaggctgcccacgcccaggccagcagga
tccgtggacaaggaaagtgacagctacagcgtcagcccctcgcaggacacagaccgggcg
aggagcagcatggtctccacagaaagtgcctcctccacctacgaagagctggccagggcc
tacgagcacgccaagatggaagagcagctgaggcacgccaagttcaccatcacggagtgc
ttcatatcagacacgtcctcggagcagctcacggcagggaccaacgactacacggacagc
ctgacgtccagcacgccgtccgagtcgggcatctgcaggttcactgcctccccccccaag
cctcaggacggagggagggtgatgaacatggcagttcccaaggcacatcgcccaggtgat
ctcatgcatttgccaccctaccttaggatggactttttattgaaccgtggcgtgcagggc
acgagcagagacctgggtttggggcaagcctgcttggagccacagaaaagccgaaccttg
aagcgtcccaccgtgctggagccgatccccatggagacatcctccacgagagatgtccag
tcatggcaacctggtgctgtggcaacgttacctcagcgagaaggagctgagctaggacag
gctcaagcaaaaatgagcagctcccaagaatccctgctggactcccggggccacttgaaa
ggaaacaatccctacgcaaagtcttacaccctggtataa
DBGET
integrated database retrieval system
