Geospiza fortis (medium ground-finch): 102040248
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Entry
102040248 CDS
T03755
Symbol
DDX24
Name
(RefSeq) DEAD-box helicase 24
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102040248 (DDX24)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102040248 (DDX24)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
Pre-60S particles
Helicases
102040248 (DDX24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
DsrH
Motif
Other DBs
NCBI-GeneID:
102040248
NCBI-ProteinID:
XP_005417911
LinkDB
All DBs
Position
Un
AA seq
799 aa
AA seq
DB search
MKARKGGRFRSSFKLRRKGIEVVGEWKTVPIDPNLFAEEEFRDIVCLEELTDYKLVSSSK
VGKVKEKKRKAESASEEGSEELEEPVVPPKKKKKNKDLRSQTDKGSTPNAAEIDVLVDKE
AKCNEMIEEEANCEDHGHVTESMSSRRDTPKKKKKKVPKNKAFQAQEGLPSVATSKKVKN
WTTEVLSASTDQKADVSAWKDLFVPEPVLQALSSLGFSAPTPVQALALPSAIRDNMDVLG
AAETGSGKTLAFAIPMIHSVLQWQKSNNSTTRNDSVSKESHQHHDEPRWENEDEAEKLTH
QQVEDSGDEDDASFTKGCVRVLENVEFDSNDETLTVGSDKNRPLLGLVLTPTRELAVQVK
HHIDAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIATPGRLWELVKERHPHLSNLRQ
LRCLVIDEADRMVEKGHFLELSQLLEILNDSQYNPRRQTFVFSATLTLVHQTPARVLQKK
NAKKMDKKTKLELLMEKVGIKGKPKVIDLTRKEATVETLTETRIHCNTNEKDYYLYYFLL
QYPGRTMVFANSIDCVKRLSSLLTILNCDPLPLHANMHQKQRLKNLERFAERESCVLLTT
DVAARGLDIPNVQHVIHYQVPRTSELYVHRSGRTARAAQEGLSLLLIGPEDLINFRKIYK
TLEKSEELPFFPVDAKCMTSIKERMNLARQIEKAEFFNSRAKQHNSWLQQAAEALEMDLD
DDMLMGKKASEQEESQKQKMLKGMKKQLKHMLSQPLFKVLMKTKYPTQSGKLLLPQTSES
ISALGAMSKKQAKKKKSVK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccagaaaaggagggagatttagatcttcctttaaattgaggcgaaaaggcatt
gaagtagtaggagaatggaaaaccgtgccaatcgaccccaatttgtttgctgaggaggag
tttcgagatatagtgtgcttggaggagctcacagattacaagctagtcagttcttccaaa
gtggggaaagtaaaagaaaagaagagaaaggctgagagtgcttctgaagaaggcagtgag
gagctggaagaacctgttgttcctccaaaaaagaaaaagaaaaacaaagatttaagaagc
caaacagataaaggcagtactcctaatgcagcagaaattgatgtgctggttgataaagag
gcaaagtgtaatgaaatgatcgaagaagaagctaattgtgaggaccatggacatgttact
gagagcatgtcaagcagaagagacactccaaagaagaagaaaaagaaggtgcctaaaaac
aaggcttttcaagcacaggaaggccttccatcagtagctacttctaaaaaagtcaaaaac
tggacaacagaagttttatctgcctcaactgatcagaaagctgatgtgtctgcatggaaa
gacctgtttgtacccgagccagtgctgcaggccttgagctccctggggtttagtgctcca
actcctgtccaagccttagccttgccttctgccattcgggataatatggacgttcttggt
gctgcagaaacaggaagcggcaaaacgcttgcatttgcaattccgatgattcactctgtg
ctgcagtggcaaaaatcaaataactcaacaaccagaaatgacagtgtttctaaagagtcc
catcagcatcatgatgaaccaagatgggaaaatgaggatgaagcagaaaaactaacccat
cagcaggttgaagatagcggagatgaagatgatgcatctttcacaaaaggctgtgtgagg
gtgctggaaaatgttgaatttgattccaatgacgagacactcactgttggatctgataaa
aacagacctctcttaggactggtccttactcctacaagagaattagctgtacaagtaaag
caccacattgatgcagttgcaaagtttacaggcattaagactgcaatcctagtgggaggc
atggctgcacagaagcaagaacgtgtgctgaatcgaaagccagaaattgtaattgcaacc
ccaggccgtctgtgggagttggttaaagagagacatccacatctttcaaatcttcggcag
ctcaggtgccttgtgattgatgaagcagaccgaatggttgagaaaggtcacttcttagag
ctgtctcagctgctggaaatcttaaatgattcacagtataaccctcgacgacagactttt
gttttttctgccactttgactttagtccatcagactcctgcaagagttttacaaaaaaag
aatgctaaaaagatggacaagaagaccaaactagaattgttaatggaaaaagtaggaata
aagggcaaacccaaagtaatagacttaacaaggaaggaggctactgttgagacactgaca
gaaacgagaatccactgtaacacaaatgagaaggactattatctctattactttcttctc
cagtatccaggaagaaccatggtctttgcaaacagcatagactgtgtaaaacgcctcagt
tctctcctcacaatcttaaattgtgatcctcttcctttgcatgccaacatgcaccaaaag
caaaggctgaaaaacctggaaaggtttgctgagcgagagagctgtgtcctcctgacaaca
gatgttgcagctcgtggtcttgatattcctaatgtccagcatgtcatccactaccaggtc
cctcgcacctcggagctctacgtgcaccggagcggccgcacggcccgagctgcccaggag
ggcctcagcctgctgctgattggccccgaggacttgatcaactttcggaaaatctataaa
acactggagaagagcgaagagctgccatttttcccagttgatgccaagtgcatgacttct
attaaggaacggatgaacttggcaaggcagattgagaaggcagaatttttcaacagtcgg
gcaaagcaacacaactcctggctccagcaagctgcagaggctcttgagatggatcttgat
gatgacatgttgatgggcaaaaaagctagtgagcaagaagaaagccagaagcaaaagatg
ctgaaggggatgaaaaaacaactgaaacatatgttgtcccagccactgtttaaagtcctt
atgaaaaccaagtacccaacacagtctggaaaactactcttgcctcagacatcagagagc
atttcagctctaggtgccatgtccaaaaagcaagccaagaagaagaaatcagtaaaataa
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