Geospiza fortis (medium ground-finch): 102040269
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Entry
102040269 CDS
T03755
Symbol
PATJ, INADL
Name
(RefSeq) PATJ, crumbs cell polarity complex component
KO
K06092
InaD-like protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102040269 (PATJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
UBA
DUF6604
Motif
Other DBs
NCBI-GeneID:
102040269
NCBI-ProteinID:
XP_014163309
UniProt:
A0A6I9ZAG4
LinkDB
All DBs
Position
Un
AA seq
1889 aa
AA seq
DB search
MPENPAADKQQVLQILDRLQAKLQEKRDSQHQENLAVLRNTLRSPLFNQILTLQQSIKQL
KEQLNYMPPDRSVDFDFTKRGLLVFADKSVTAGTPCTLPAPRASAFTPNLAVNEFNMIIQ
QMAKGRQIESITIDKPSVGGLGFSVVALKNPSLGEVGIFVKEVQPGSIADRDQRLRENDH
ILAINCTPLDQNISHQHAIALLQQSTGSLHLVVAREPLQGNSRTALFSDVNPPETIHWGH
VEDVELINDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILQIGGTNVQGMT
SEQVAQVLRNCGNSVRMIVARDPKCEFMEAPPAPLSWPVSTLPSLPNGNDNDNFFDTYDV
ELIKKNGQSLGITIVGYAGTCDLEPSGIFVKSIIPGSAADHNGQIHVHDKIVAVDGVNIQ
GFTNQEVVEALRNTGQTVRLTLLRRRPSFAISSGTPSGRVQPFVPVFVTPGAAGPEISVA
TRSEGKQEQKDNLHNGKQQSLHQAGRVPLPPAHELKSKWENLLGPEYEVMVVNVDMPFKD
DSELQKYSKLLPIHTLRLGVELDTFDGHHYISSIASDGPAAALGLLQLEDELLEVNGVQL
CGRSRREAVTFLKEVPPPFTLVCCRRLFSDGTESWVDEPPVAVSPPEQQVKPEEDFNPEE
EEGELALWSPDVKVIELEKDKNGLGFSILDYQDPLDPAGTAIVISSLVPGGVAERGGQIL
PGDRLVFVNEKHLDGATLAEAVEVLTSVPPGTVSLGICKPLVGDSREEEKMHSVETSSIK
SSPGSPEPIDNTNFSVILEAPQGFRDEVPFKEELVDEPHVDLGRSFQLSQKDEEYGKESW
EMREFLKVRAEDVEEEREMLVDEEYEEDSDFLKGDDASGGEEAASDRNLDTERWAEQLET
GETQDLRSSVSLSAKESLEYPFRKDQMCEENAALRSHISGTTAPSSYQKDIFDAETTQAE
VKTEMNLGTKLQSDSKGPELAADSEAVGKEALKEENYVLPKSQESGRVTTLAQPRAASGS
ELPEREEGEGEETPNFSHWGPPRIVEIFRDPEVSLGISIVGGQTVIKRLKNGEELKGIFI
KQVLEDSPAGRTRALKTGDKILEVSGVDLQNATHKEAVDAIKNAGNPVVFVVQSLANVPK
VVSPAQPKGIKVSKDQDADKENKSDKRKYGAPPPMKLPPPYRALERHHAGEAALGEEEDE
DACAEEKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPDGPAGRD
GRMHIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRSEDAVNQMAVTPFPLPSG
SHSAIEDHSGTEPAGGEEDPSLEVVMKSLTDEESSKADVKCKADTPVVADEQEAEEQLPE
NVLSQIKQPKSSTAAPGSCQESPLEPAAPHLPPEPEATSRGVFPPALPVDPATCPIVPGQ
EMTIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGIDLR
SASHEEAITALRQTPQKVQLVVYRNEAHYKDEENLEIFSVDIQKKTGRGLGLSIAGKRNG
SGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQETVATILKCAQGLVHLELGRL
RAGSWLSSRKTSQNSQASQQSAHSHFHPALAPVLSTLQNFVSTKRSSADTSQRSSGGADM
GPRTVEITRGPYDALGVSIAGGKGSPLGDIPIFIAMIQASGVAARTQRLRVGDRIVSING
QPLDGLSHADAVNLLKNAYGSIILQVVADTNISAIASQLESMSTGCSLSLPSEHPAEDPE
APQPKIITLEKGSDGLGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQIVAVN
GEALEGVTHDQAVAILKRQKGTVTLTVLS
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatccagcagcagataagcagcaggtgctgcagatcctggatcggctgcag
gcaaagctgcaggagaaaagggattcccagcaccaggaaaacctggctgtcctaaggaac
accctcaggagccccctgttcaaccagatcctgactctccagcaatccatcaagcagctg
aaggagcagctcaattacatgcctcccgaccgctcggtggattttgattttaccaagagg
gggctcttggtgtttgctgacaaatcagtcactgctgggacaccttgcactttacctgca
cccagagcatcagccttcactccaaacctggcagttaatgaatttaacatgatcatccag
caaatggcaaagggaagacaaatagaatcaattaccattgataaaccttctgttggaggg
cttggattcagtgtggttgcccttaaaaatccgagcctgggagaagttggtatctttgtc
aaggaagtccagccaggaagcatagctgacagggatcaaagactgagggaaaatgaccac
atactggccattaattgcacgccattggatcagaacatttcccatcagcacgccattgcc
ctcctccagcaatccacaggatccctgcatctggtggtggctcgggagccgcttcaaggg
aacagcagaactgccttgttcagtgatgtaaatccacctgagactattcactggggccac
gtcgaagacgttgagctgattaacgatggctcaggattaggctttggaattgtaggagga
aagtcgagtggagtagttgtaagaacaattgttcctgggggattagcagatcgggacggg
aggctgcagacaggagaccacatcttgcagattggagggaccaacgtgcagggcatgacc
agtgagcaggttgcccaggtgctcaggaactgtgggaattctgtcaggatgatcgtggca
agggaccccaagtgtgaattcatggaggctccaccagctcccctgagctggccagtcagc
acattgccttcccttccaaatggaaatgataatgacaacttttttgatacctatgatgtt
gaacttataaaaaagaatgggcaaagcctgggaataacaattgttggatatgctggcaca
tgtgatctagaaccttcagggatttttgtgaaaagtataatacctgggagtgctgctgac
cacaatgggcaaattcatgttcatgacaaaattgttgctgttgatggagtcaacatacag
ggttttaccaaccaagaagtggtggaggcactgcggaacacggggcagactgtacgtctc
accttgcttagaaggagaccttcctttgctatttcctcaggaacaccttcagggagagtg
cagccatttgttccagtctttgtgacccctggagctgcggggcctgaaattagtgtggcc
actaggagtgagggaaaacaagaacagaaggataatcttcacaatggaaagcagcagagt
ctgcatcaagcaggaagagtcccactccctccagcacatgagctgaaatccaaatgggaa
aacctgctgggaccagaatacgaagttatggttgtgaatgtggatatgccctttaaagac
gattcagagctccagaagtactcgaagctgttacccatccacactctgagattaggggtt
gagctggacacttttgatggacatcattatatatcatccattgcttcagatggcccagct
gcagctcttggtcttctgcaactggaggatgaacttctggaggtaaacggggtgcagctg
tgtggcaggtcccggcgtgaggctgtcaccttcctcaaggaggtgccaccccccttcacc
ctggtgtgctgccggcggctcttcagcgacggcaccgagtcctgggtggacgagcccccc
gtggcagtgtcccctccagagcagcaggtgaaacccgaggaagactttaatcctgaggag
gaagaaggggaattggcattatggtctcctgatgtgaaggttattgagctggagaaagac
aaaaatggtttaggattcagcattttggactatcaggaccccttggatccagcaggaaca
gccatagtgatcagctccctggtgcccggtggcgtggccgagcgcggggggcagattttg
ccgggcgaccgcttggtgttcgtcaacgagaaacatctggatggtgccaccttggcagag
gcggtggaagtgctgacatctgtgcccccagggacagtttcccttgggatctgcaagcct
ttagtgggagacagcagagaggaggagaaaatgcacagtgtggaaaccagcagcatcaaa
agcagccctgggtctccagaaccaatagataacacaaatttctcagtaatacttgaagca
ccacagggtttcagagatgaggtgcctttcaaagaagaactcgttgatgagccccatgtg
gacttgggaaggtcatttcagctttctcagaaggatgaggagtatggcaaggagtcctgg
gagatgcgtgagtttctgaaagtcagagcagaggacgtggaggaggaacgggagatgttg
gtggatgaggagtacgaggaggattcagacttcctgaagggggatgatgcatcaggtgga
gaggaggcagcttcagacaggaatctggacacagaacgatgggcagagcaactggagact
ggtgaaacacaagatttaagatccagtgttagcctaagtgccaaagagtccctggaatat
ccattcaggaaagatcaaatgtgtgaagagaatgctgctttaaggtcacacatttctgga
accacagctcccagcagctaccaaaaagacatatttgatgctgaaactacccaggcagaa
gtgaaaactgagatgaatttagggacaaagcttcagagtgactccaaaggacctgagctt
gctgctgattcagaagcagttggaaaggaagccctgaaagaggagaattatgttcttccc
aagagccaggaatctgggagagtaaccaccttagctcagcctagagcagcatcaggcagt
gaattacccgagagagaagaaggagaaggagaagaaactccaaacttcagccactgggga
ccaccacggattgttgagatcttcagagaccctgaggtgtctcttggaatcagcattgtt
ggtggacaaactgtcataaagcgcctgaagaatggagaagaacttaaagggatctttatc
aaacaagttctggaagacagcccagcaggaagaacaagggctttaaaaactggagataaa
atacttgaggtttctggggtagacctacaaaatgccacccacaaggaagcagtagatgcc
atcaagaatgcaggaaatcctgtggtgtttgtagtccagagcttggctaatgtaccaaaa
gtggtttctcctgcccagcctaagggaatcaaagtcagcaaagatcaggatgcagacaaa
gaaaataagagtgataagaggaaatatggggctccacctcccatgaagctgccacctcct
tacagagccctcgaaaggcatcacgcaggggaggctgctctgggtgaagaggaggatgag
gatgcttgtgcagaggaaaaaatcaggcagagatatgcagatctcccgggagaattgcac
attattgagctggagaaagacaagaatgggctggggctcagcctggctggcaacaaggac
cgctccaggatgagcatcttcgtggttgggatcaaccccgacggccccgcgggacgggac
gggcgcatgcacatcggggatgagctcctggagataaacaatcagatattgtatggaaga
agccaccaaaatgcttctgcaatcattaaaactgccccatccaaggtcaagctggttttc
atacgaagtgaagatgcagtcaaccagatggctgtcactcccttcccactgccttcaggc
tcccactctgccattgaggaccactctggcaccgaacctgcaggaggtgaggaagaccca
agtttggaagttgtcatgaaaagcttgactgatgaggagtccagcaaagctgatgtgaag
tgtaaggctgacacaccagtggtggcagatgagcaggaggcagaggagcagctcccagaa
aacgtcctcagccagatcaaacagcccaaatcttccacggcagccccagggagctgccag
gagtcccccctggagccagcagctcctcaccttcctccagagccagaagccaccagccgt
ggtgtcttcccacctgcactgcctgtggatccagccacctgtcccatagttccagggcag
gagatgaccatagagatctccaagggtcgctcaggccttgggctcagcatcgtcgggggc
aaggacactcccctggatgccatagtgatccatgaagtttatgaagaaggggcagcagcc
cgagatggcagactctgggctggtgatcagattctggaggtgaacgggatcgatctgcgc
agcgccagccacgaggaagccatcactgccctccggcagacgccccagaaggtgcagctg
gtggtttacaggaatgaggcacactacaaggatgaggaaaacttggagattttctctgtg
gatatccaaaagaaaacgggcagagggctggggctcagcatagctgggaaacgaaatgga
agtggagtgtttatctctgacattgttaaaggaggagctgcagacctagatggaagatta
attcaaggagatcagattttgtctgtaaatggggaggatatgagaaatgcctcacaagag
actgttgccactatacttaagtgtgcccaaggcctggtgcatcttgagcttgggagattg
cgagctgggtcgtggctgtcatcgaggaaaacatcccagaacagccaggcgagccagcag
agtgcccacagccacttccaccccgcgctcgcccccgtcctctccaccctgcagaacttt
gtcagcacaaagagatcctcagcagacacatcccagagaagctcaggaggcgccgatatg
ggcccgaggactgtggagataacaaggggcccatatgatgccctgggtgtcagcatagca
ggagggaagggcagtcccctgggagacatccccatcttcatcgccatgatccaggccagc
ggagtggctgctcgcacacagaggctcagagttggggatcggattgtcagcattaatggg
caacctttggatgggctgtctcatgcagatgcagttaatctactaaagaatgcttatggg
agcattatcctgcaggtggtggctgacaccaacatcagtgccattgccagccagctggag
agcatgtccacgggctgcagcctcagcctgccctccgagcatcccgccgaggatcccgaa
gcacctcagcctaagattattactttggagaaaggctctgatggactgggatttagtatt
gtggggggctatggaagtccccatggagacctgcccatttatgtcaagactatatttgcc
aagggtgcggcggccgacgacggccggctgaagcgcggggaccagatcgtggccgtcaac
ggggaggccctggaaggcgtcacccacgaccaggccgtggccatcctgaagcgccagaag
gggacagtgaccctgacagtgctgtcctga
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integrated database retrieval system
