Geospiza fortis (medium ground-finch): 102040282
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Entry
102040282 CDS
T03755
Symbol
NEO1
Name
(RefSeq) neogenin 1
KO
K06766
neogenin
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04350
TGF-beta signaling pathway
gfr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102040282 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102040282 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gfr04515
]
102040282 (NEO1)
Cell adhesion molecules [BR:
gfr04515
]
Immunoglobulin superfamily
DCC/UNC5 family
102040282 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Tissue_fac
C2-set_2
SusE
TMEM154
TM_ErbB1
EphA2_TM
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
102040282
NCBI-ProteinID:
XP_005425990
LinkDB
All DBs
Position
Un
AA seq
1399 aa
AA seq
DB search
MVNESLVRTFTPFYFLVEPLDVLAVRGMSVIMNCSAQCESPPRIEWRKDGSFLNLVSDDR
RQLLPDGSLLINSVVHSKHNKPDEGYYQCVATVDSLGTIVSRTAKLTVAGLPRFTSQPEP
TSVRRGGSAVLGCEVTAELAPLLRWERDRQALAPEPRVLQLPGGALLLSNASDSDAGLYR
CALDSPGTPKYSDEAELKVLPDAEEPQKLALLKPPSSLSRLAGQSALFPCVAAGFPPPLV
RWTRNGEELPTDGSGRFQLLPGGVLEIRDVTEADAGTFTCIAESGNDTLEAQAELAVQVP
PTFLKRPGNIYAHESMDIVFECEVTGKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGL
VKSDEGFYQCIAENDVGNAQAGAQLIILDLAAAPAGPLPSAPRDVVATLVSTRFIRLTWR
PPASDPHGDNLTYSIFYTKEGINRERVENTSRPGETQVMIQSLMPETVYVFRVVAQNRHG
PGESSAPLKVATQPEVQLPGPAPNIRAFSSSPTSVTVTWETPLSGNGDIQNYKLYYMEKG
QHTEQDVDVAGLSHTVTGLKKFTEYSFRVVAYNKHGPGVSTHDVVVRTLSDVPSAPPQNL
TLEVRNSKSILLQWQPPPAGTQSGQITGYKIRYRRVARKSDVTESVAGTQLSQLIEGLER
GTEYSFRVAAMTVNGTGPATDWVSAETFESDLDESRVPEVPSSLHVRPLVTSIVVSWTPP
ENQDVVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPL
YESAVTRPHSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPK
NQKITDARFYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTW
SMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAE
IHDWVIEPVVGNRLTHQIQELTLDTPYFFKIQARNSKGMGPMSEAVQFRTPKAESSDKMP
NDQASGSAGKGSRPMDLGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVV
IVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDP
NPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPF
DSQPPQPVISAHPIHSLDPPHHHFHSGSLASPTRSFLQHQLSPWPLGSAMSHSDRADSTE
SVRNTPSTDTMPAGSAVPGAELPEPEGPFLPAEEEPQGPPTGPVRPSSLGRQQRQCPCLT
CPPLSAAPGHPLHAVKTASIGTLGRTRPPMPVVVPSAPEVQETTRMLEDSESSYEPDELT
KEMAHLEGLMKDLNAITTA
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgaatcacttgtgagaaccttcactcctttctacttcctggtggagcccctg
gatgtgctggcagtgcgagggatgtcggtgatcatgaactgctcggcgcagtgcgagagc
ccgccccggatcgagtggaggaaggacggctccttcctcaacctcgtgtccgacgaccgc
cgccagctgctgcccgatggatctttattaattaacagcgtggtgcattccaagcacaat
aaacctgatgagggatattatcagtgtgtggcaactgtggacagcctggggaccatcgtg
agcaggacagcgaagctcaccgtggcaggtctgcccaggttcacgagccagccggagccc
acgtccgtgcgccgcgggggcagcgccgtgctgggctgcgaggtgacggccgagctggcg
ccgctgctgcgctgggagcgcgaccggcaggcactggccccggagccgcgcgtgctgcag
ctgcccgggggggccctgctgctcagcaacgcctcggacagcgacgcggggctctaccgc
tgcgccctggacagccccggcacccccaagtacagcgacgaggccgagctcaaagtcctg
ccagatgcagaggagccacagaagctggcgctgctgaagccgccctcgtccctgagccgc
ctggccgggcagagcgccctgttcccctgcgtggccgccggcttccctcctcccctcgtc
aggtggacacggaacggggaggagcttcccaccgatgggtctggccggttccagctgctg
ccagggggggtgctggagatccgggatgtgaccgaggccgacgccgggaccttcacctgc
atcgctgagagcggcaacgacaccctggaggcccaggcagagctggcagtgcaagttccc
cccacgttcctgaagcgcccgggcaacatctacgcccacgagtccatggacatcgtgttt
gagtgcgaggtgaccgggaaaccgacgccgactgtcaagtgggtcaagaacggggacgtg
gtgatccccagcgactacttcaaaatcgtgaaagaacataacctgcaagttttggggctg
gtgaagtctgatgaaggattctatcagtgcattgcagaaaacgatgttggaaatgcacag
gctggagcccagctgataatacttgaccttgcagcagccccagcgggacccctgccctcg
gccccgcgggacgtcgtggccaccctggtgtccacccgcttcatccggctcacctggcgc
ccgcccgcctccgacccgcacggggacaacctcacctactccatcttctacaccaaggag
ggcatcaacagggaacgtgtggaaaacacgagtcgtcctggagagacgcaggtgatgatc
cagagcctgatgccagagacagtttatgtgttccgggtggtggcccagaaccggcacggc
cccggcgagagctcggcaccgctcaaggtggcaacgcagcccgaggtccagctgcccggc
cctgctcccaacatccgcgccttctccagctcccccaccagcgtcactgtcacctgggag
acgccgctctcgggcaatggggacatccagaactacaaactctactacatggagaaggga
cagcacacagagcaggatgtggacgtggcagggctgtcacacacggtgacagggctgaag
aagttcaccgagtacagcttccgcgtggtcgcctacaacaagcacggccccggtgtctcc
acccacgacgtcgtggtgcgcaccctgtcagacgtccccagtgctccaccccagaatcta
acgctggaggtccggaattccaagagcatcctgctgcagtggcagccccctcctgccggg
acccagagcgggcagatcacggggtacaaaatccgctaccgcagagtggcccgcaagagc
gacgtcaccgagagcgtggcgggcacccagctctcccagctcatcgagggtttggagcga
ggcaccgagtacagcttccgcgtggccgccatgaccgtcaacggcaccggccccgccacc
gactgggtgtcagctgagaccttcgagagcgacctggacgagagccgtgtgcccgaggtg
cccagctccctgcacgtgcgcccgctggtcaccagcatcgtggtgagctggaccccgccc
gagaaccaggacgtggtggtcaggggctacgccatcggctacggcatcggcagcccccac
gcccagaccatcaaggtggactacaagcagagatactacaccattgagaacctggatccc
agctcccactatgtgataaccctgaaagccttcaacaacgtgggggaggggatccccctg
tacgagagcgctgtgacccggccccactcggacacttccgaggttgatttgtttgttatt
aatgctccatacactccagtgccagatccgtctcccatgatgcccccggtgggagttcag
gcttccatcctgagccatgacaccatcaggatcacttgggcagacaactccctgcccaag
aaccagaagatcacggacgcgcgcttctacaccgtccgctggaaaaccaacatccctgcc
aacaccaagtacaagactgcaaatgccaccaccctgagctatctggtgacggggctgaag
ccaaacaccctctacgagttctcggtgatggtgaccaagggcaggagatccagcacctgg
agcatgacagcacatgggacaacctttgaattagtgccaacctcaccccccaaggacgtg
actgtggtgagcaaggagggcaagccccgcaccatcatcgtcaactggcagccgccctcc
gaggccaacggcaaaatcacaggctacatcatctactacagcacggacgtcaacgccgag
atccacgactgggtcatcgagcccgtggtgggaaacaggctcacacaccagatccaggag
ctcaccctggacaccccctacttcttcaagatccaagcccgcaactccaagggcatgggg
cccatgtccgaggccgtgcagttccgcacccccaaagctgagtcctcagataaaatgccc
aatgaccaagcctcaggatctgctgggaaggggagccgccccatggacctgggcccggac
tacaaacccccgctgggaggcagtaacagtccccatggcagccccacatcccctctggac
agcaacatgctgctggtgatcatcgtgtccgtgggcgtcatcaccatcgtcatcgtcgtc
atcgtcgccgtcttctgcacgcgccgcaccacgtcccaccagaaaaagaaacgagccgcc
tgcaaatccgtgaacggctcccacaagtacaaggggaactccaaagatgtcaaaccccca
gacctctggatccatcacgagaggctggagctcaaacccattgataaatccccagatccc
aaccccatcatgacagacacccccatccctcgcaactcccaggacatcaccccggtggac
aactccatggacagcaacatccatcaaaggaggaattcctacagaggacacgagtcagag
gacagcatgtccacgctggcaggaaggaggggcatgaggcccaagatgatgatgcctttt
gattctcagccacctcagcctgtgattagtgctcatcccatccattccctcgacccccct
caccaccatttccactccggcagcctcgcctctccaacccgcagcttcctgcagcaccag
ctcagcccgtggcccctgggctctgccatgtcccattcggacagggccgactccacagag
tccgtccggaacacgcccagcacggacaccatgccggcgggctcggccgtgcccggcgcg
gagctgccggagcccgaggggccgttcctgcccgcggaggaggagccgcagggccccccc
acgggccccgtgcgcccgagctccctgggcaggcagcagaggcagtgcccgtgcctgacg
tgtccccccctctctgcagcccctgggcaccccctgcacgcagtgaagacggcgtccatc
ggcaccctgggcaggacccggccgcccatgcccgtggtggtgcccagcgcccccgaggtg
caggagaccacgcggatgctggaggactcggagagcagctacgagcccgacgagctgacc
aaagaaatggcgcacctggaaggactcatgaaggacctgaacgccatcaccacggcgtga
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