Geospiza fortis (medium ground-finch): 102040374
Help
Entry
102040374 CDS
T03755
Symbol
SREBF2
Name
(RefSeq) sterol regulatory element binding transcription factor 2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102040374 (SREBF2)
04131 Membrane trafficking [BR:
gfr04131
]
102040374 (SREBF2)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
102040374 (SREBF2)
Membrane trafficking [BR:
gfr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102040374 (SREBF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
KH_DTX3L
Motif
Other DBs
NCBI-GeneID:
102040374
NCBI-ProteinID:
XP_005421934
UniProt:
A0A6I9HHQ3
LinkDB
All DBs
Position
Un
AA seq
1088 aa
AA seq
DB search
MLQFVNNQGGDFTDLFMDPLSSTFQGGSSSGSSSGTLEPQLQRPYSQVQLQTFPAPPASP
QLQSLPVKAAPTAPAAPPRSAPVLQPRPSVQPQLQQQAVMITPTFSSAPQTRIIQQPVIY
QNAATSFQVLQPQVQSLVTSSQVQPVTIQQQVQTVQAQRVLTQAANGTIQTLTPATVQTV
AAPQAQQVPVLVQPQIIKTDSLVLTTLKTDGNPVMAAVQNPALTALTAPIQTTALQTLVG
SNGTILTTMPVMVGQEKVPIKQVPGGVKQPEPPKEGERRTTHNIIEKRYRSSINDKIIEL
KDLVMGTDAKMHKSGVLRKAIDYIKYLQQANHKLRQENMVLKLANQKNKLLKGIDLSSLV
DNDVDLKIDDFNQNVLLMSPPASDSGSPAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVA
LGMVDRSRMLLCALTFLCLSFNPLTSLLDVRGSPESDSLVRHGSGRNVLAIKSDAAGWFG
WVMPTLILWLVNGVIVLSVFIKLLVHGEPVTRLHSRSSVTFWRHRKQADLDLARGDFAAA
ASNLQTCLSVLGRALPASRLDLACSLSWNVIRYSLQKLALVRWLLKRTSHQWRAREATAG
FEDEAKTSARDAALAYHKLHQLHITGKLPSSSAYSGLHMALCAVNLAECAEEKIPPSTMA
EIHLTAAVGLKTRCGGKLGFLASYFLSQAQSLCSSERSAIPDSLRWLCHPLGQKFFVERS
WMVKSAAKESLYCTQRNPADPIAQVHQAFCENLLERAVDSLVKPQTRKEVAGQEEEESCE
FSGAMEYLKLLNSFLDSMGSGAPPFASNSVLKSALGPDVVCRWWSAAVAMAIAWLRGDDA
AVRAHFAEVERMPKSLEMSEDALVKATFYMCKAMQASLSGKADGQQSSLGHCERASSHLW
NSLNMSGGTSSTVLNNMIQLLACDLLLSFSTSLWQKQANASQALGETYHASAAELTGFQR
DLGSLRKLAHSFRPAYRKVFLHEATVRLMAGASPTRTHQLLEHSLRRRTPQSSKQGELDT
LPGQRERATAILLACRHLPLSFLSSPGQRAVLLAEAARTLEKVGDKRSCNDCQQMIVKLS
GGTAIAAS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagtttgtcaataaccagggaggagacttcacagacctgtttatggatcccttg
tccagcaccttccagggtggcagcagcagtggcagcagcagcgggaccctggagccgcag
ttgcagcgtccctacagccaggtgcagctgcagaccttccctgcaccccctgcatccccc
cagctccagagcctgccggtgaaggcggcgccgacggcgcctgcagcccctcctcgctcg
gcccctgtcctgcagccacggccctcggtgcagcctcagctccagcagcaggccgtcatg
atcacaccaaccttcagctctgctccccagaccaggattatccagcagccagtcatctac
cagaatgcagccacaagcttccaagttctccagcctcaggtccagagcttggtgacatcc
tcgcaggtccagccggtgacgatccagcagcaggtgcagacggtgcaggcccagcgagtg
ctgacgcaggctgccaacggcaccatccagaccttaacgcctgccacggtccagactgtt
gctgcaccacaggctcagcaggttccagttcttgtccaacctcagatcataaaaacggat
tccctggtcttgacaaccctgaaaacagatggcaatcctgttatggctgcagtacagaac
ccagcactgacagcactcactgctcccattcagaccacagctctgcagacccttgttgga
agcaatgggaccattttgaccacaatgccagtgatggtgggacaagaaaaggtgcctatt
aaacaagttcctgggggtgtcaagcaacctgaaccacccaaagaaggagagaggagaaca
actcacaacatcattgaaaagcgctaccggtcatccataaatgacaaaatcattgagctg
aaggacctggtcatggggacagatgccaagatgcacaagtctggcgtcctgagaaaagcc
attgactacattaaatacctgcagcaagctaaccataagctgaggcaggagaacatggtt
ctgaagctggctaaccaaaaaaacaagctgttgaagggcattgacctgagcagtctggtt
gacaacgatgtagacctgaagattgatgacttcaaccagaatgtgctgctgatgtctcct
ccagcgtctgattcaggatctccggctggcttctctccctattccattgattcagagcca
ggaagccctctccttgatgatgcaaaggttaaagatgagcctgactctcctcctgtggca
cttggtatggtggatcgctctcgtatgctcctgtgtgctctcacattcctttgcctttcc
ttcaatccactgacatccctcctggatgtgcgaggaagccccgagtccgacagcctggtg
cgccatggctctggcaggaacgtgctggccatcaagtcagatgcagctggttggttcggt
tgggtgatgcccacgctaatcctgtggctcgtgaatggagtgattgtactgagtgtgttt
ataaagctccttgtgcacggagagccagtgacccggctgcactcaaggtcctcggtcacc
ttctggaggcaccgcaagcaagcggacctggatttggcacggggtgattttgctgcagct
gcgtcaaacctgcagacttgcctgtcagtactcgggcgagcactgccagcttcccgcctg
gacttggcctgcagcctgtcctggaatgtgatccgctacagtctgcagaagctggccctg
gtgcggtggttgctgaagaggacttctcatcagtggcgggcgagggaggccactgcaggg
ttcgaggatgaggccaagaccagtgctcgggatgctgccctggcatatcacaagctccat
cagctccacataacaggtaaacttccctccagctcagcttactcgggcttgcacatggca
ttgtgtgctgtgaatctggctgagtgtgcagaagaaaaaatcccacccagcacaatggca
gaaatccacctgacggctgcagttggcttgaaaacccgctgtggaggcaagcttggtttc
ctggcgagctactttctcagccaggctcagagcctgtgcagctcggagcgaagtgccatt
cctgactcgttgcgttggctctgccaccccctgggacagaagttttttgtggagcgaagc
tggatggtgaagtctgctgcgaaggagagcctgtactgcacgcaaaggaatcctgcggat
cccattgcacaggtccatcaggcattctgtgagaacctgctagagcgagcagtggattca
cttgtgaagcctcagactaggaaagaggtagcaggacaagaggaggaggagtcatgtgaa
ttctcgggtgccatggagtacctgaaattgctcaactccttcttggactcgatgggaagt
ggagccccaccctttgccagcaattccgtactcaagtctgccctgggtcccgacgtggtg
tgccgctggtggtcagcagccgtggccatggcaatcgcttggctcagaggggacgatgca
gctgtgagggcacatttcgcagaagtggagcgcatgccaaagtccctggagatgtcagag
gatgccctggtgaaagctaccttctacatgtgtaaagctatgcaggcctctctgtctgga
aaggcagatggacagcagagctccctgggtcactgtgagagggccagcagtcacttgtgg
aacagcctcaacatgagcggtggcacgtccagcactgtcctcaacaatatgatccagctg
ctggcctgtgacttgctgctctccttcagcaccagcctgtggcagaagcaggccaacgcc
agccaggcgctgggtgagacctaccacgcctcggccgccgagctgacgggcttccaacgc
gacctgggcagcctgcgcaagctggcccacagcttcagacccgcctaccgcaaggtcttc
ctccacgaggccacagtgcgcctgatggcaggtgccagcccgacccgcacccaccagctg
ctggagcacagcctgaggcggcgcacgccccagagcagcaaacaaggtgaactggacacg
ttgccgggccaaagggagcgagccacagccatcctgctggcctgccgccatctccccctg
tccttcctgtcgtcgccgggccagcgcgcggtgctgctggccgaggctgcccgcaccctg
gagaaggtgggggacaagcgctcctgcaacgactgccagcagatgatcgtcaagctcagt
gggggcacagccatcgctgcctcctaa
DBGET
integrated database retrieval system
