Geospiza fortis (medium ground-finch): 102040388
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Entry
102040388 CDS
T03755
Symbol
UBC
Name
(RefSeq) ubiquitin C
KO
K08770
ubiquitin B/C
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03320
PPAR signaling pathway
gfr04120
Ubiquitin mediated proteolysis
gfr04137
Mitophagy - animal
gfr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102040388 (UBC)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102040388 (UBC)
04137 Mitophagy - animal
102040388 (UBC)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
102040388 (UBC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102040388 (UBC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102040388 (UBC)
Ubiquitin system [BR:
gfr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
102040388 (UBC)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
102040388 (UBC)
Exosomal proteins of other body fluids (saliva and urine)
102040388 (UBC)
Exosomal proteins of colorectal cancer cells
102040388 (UBC)
Exosomal proteins of bladder cancer cells
102040388 (UBC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
DUF2604
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
102040388
NCBI-ProteinID:
XP_014163868
UniProt:
A0A6I9Z9V4
LinkDB
All DBs
Position
Un
AA seq
565 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGRQIFVKTLTGKTIPLEVEPRDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSVYNIQKEATLHLALRLRGGRQIFVKTLTGKT
IPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSVYNIQKEATLHLALR
LRGGRQIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SVYNIQKEATLHLALRLRGGRQIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
DVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEALCTWCCASGGAVKFLCILL
DPRVASGTCVCTVVLQCLNIKLMQG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagacgggcgcactctgtccgactacaac
atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc
gtgaagaccctgactggcaagaccatcactctggaggtggaacccagtgacaccatcgag
aatgtgaaggccaagatccaggataaggaagggatccctcctgaccagcagaggctgatc
tttgcggggaagcagctggaagacgggcgcaccctgtccgattataacatccagaaagag
tcaactcttcacctggtgctgcgcctcaggggtgggaggcagatcttcgtgaagaccttg
actggcaagaccatccccctggaagtcgagccccgtgacaccattgagaacgtgaaggcc
aagatccaggacaaggagggcattcccccagatcagcagaggctgatctttgcggggaag
cagctggaagacgggcgcaccctgtccgtttataacatccagaaagaggcgactctgcac
ctggcgctgcgcctcaggggtgggaggcagatcttcgtgaagaccttgactggcaagacc
atccccctggaagtcgagccccgtgacaccattgagaacgtgaaggccaagatccaggac
aaggagggcattcccccagatcagcagaggctgatctttgcggggaagcagctggaagac
gggcgcaccctgtccgtttataacatccagaaagaggcgactctgcacctggcgctgcgc
ctcaggggtgggaggcagatcttcgtgaagaccttgactggcaagaccatccccctggaa
gtcgagccccgtgacaccattgagaacgtgaaggccaagatccaggacaaggagggcatt
cccccagatcagcagaggctgatctttgcggggaagcagctggaagacgggcgcaccctg
tccgtttataacatccagaaagaggcgactctgcacctggcgctgcgcctcaggggtggg
aggcagatcttcgtgaagaccttgactggcaagaccatccccctggaagtcgagccccgt
gacaccattgagaacgtgaaggccaagatccaggacaaggagggcattcccccagatcag
cagaggctgatctttgctggcaagcagcttgaagacggacgcactctgtctgactacaac
atccagaaagagtcgactctgcacctggtgctgcgcctcaggggtgggatgcagatcttc
gtgaagaccctgactggcaagaccatcacccttgaggttgagcccagtgacaccattgag
gatgtgaaggccaagatccaggacaaggagggcattccccctgaccagcagaggctgatc
tttgctggcaagcagctggaagacgggcgcactctgtctgactacaacatccagaaagag
gcgctctgcacctggtgctgcgcctcagggggggctgttaagttcttgtgcatcttgctt
gaccccagggttgccagtggcacttgtgtttgcactgtagttcttcaatgtcttaatatt
aagttaatgcaaggttaa
DBGET
integrated database retrieval system
