Geospiza fortis (medium ground-finch): 102040388
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Entry
102040388 CDS
T03755
Symbol
UBC
Name
(RefSeq) ubiquitin C
KO
K08770
ubiquitin C
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03320
PPAR signaling pathway
gfr04120
Ubiquitin mediated proteolysis
gfr04137
Mitophagy - animal
gfr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102040388 (UBC)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102040388 (UBC)
04137 Mitophagy - animal
102040388 (UBC)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
102040388 (UBC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102040388 (UBC)
Ubiquitin system [BR:
gfr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
102040388 (UBC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
DUF2604
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
102040388
NCBI-ProteinID:
XP_014163868
UniProt:
A0A6I9Z9V4
LinkDB
All DBs
Position
Un
AA seq
565 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGRQIFVKTLTGKTIPLEVEPRDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSVYNIQKEATLHLALRLRGGRQIFVKTLTGKT
IPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSVYNIQKEATLHLALR
LRGGRQIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SVYNIQKEATLHLALRLRGGRQIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
DVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEALCTWCCASGGAVKFLCILL
DPRVASGTCVCTVVLQCLNIKLMQG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagacgggcgcactctgtccgactacaac
atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc
gtgaagaccctgactggcaagaccatcactctggaggtggaacccagtgacaccatcgag
aatgtgaaggccaagatccaggataaggaagggatccctcctgaccagcagaggctgatc
tttgcggggaagcagctggaagacgggcgcaccctgtccgattataacatccagaaagag
tcaactcttcacctggtgctgcgcctcaggggtgggaggcagatcttcgtgaagaccttg
actggcaagaccatccccctggaagtcgagccccgtgacaccattgagaacgtgaaggcc
aagatccaggacaaggagggcattcccccagatcagcagaggctgatctttgcggggaag
cagctggaagacgggcgcaccctgtccgtttataacatccagaaagaggcgactctgcac
ctggcgctgcgcctcaggggtgggaggcagatcttcgtgaagaccttgactggcaagacc
atccccctggaagtcgagccccgtgacaccattgagaacgtgaaggccaagatccaggac
aaggagggcattcccccagatcagcagaggctgatctttgcggggaagcagctggaagac
gggcgcaccctgtccgtttataacatccagaaagaggcgactctgcacctggcgctgcgc
ctcaggggtgggaggcagatcttcgtgaagaccttgactggcaagaccatccccctggaa
gtcgagccccgtgacaccattgagaacgtgaaggccaagatccaggacaaggagggcatt
cccccagatcagcagaggctgatctttgcggggaagcagctggaagacgggcgcaccctg
tccgtttataacatccagaaagaggcgactctgcacctggcgctgcgcctcaggggtggg
aggcagatcttcgtgaagaccttgactggcaagaccatccccctggaagtcgagccccgt
gacaccattgagaacgtgaaggccaagatccaggacaaggagggcattcccccagatcag
cagaggctgatctttgctggcaagcagcttgaagacggacgcactctgtctgactacaac
atccagaaagagtcgactctgcacctggtgctgcgcctcaggggtgggatgcagatcttc
gtgaagaccctgactggcaagaccatcacccttgaggttgagcccagtgacaccattgag
gatgtgaaggccaagatccaggacaaggagggcattccccctgaccagcagaggctgatc
tttgctggcaagcagctggaagacgggcgcactctgtctgactacaacatccagaaagag
gcgctctgcacctggtgctgcgcctcagggggggctgttaagttcttgtgcatcttgctt
gaccccagggttgccagtggcacttgtgtttgcactgtagttcttcaatgtcttaatatt
aagttaatgcaaggttaa
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integrated database retrieval system
