Geospiza fortis (medium ground-finch): 102040428
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Entry
102040428 CDS
T03755
Symbol
SNX13
Name
(RefSeq) sorting nexin 13
KO
K17925
sorting nexin-13
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102040428 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
102040428 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
102040428
NCBI-ProteinID:
XP_014167564
LinkDB
All DBs
Position
Un
AA seq
1024 aa
AA seq
DB search
MPSMEPPGANTGASPAFHKDLAHGPEHNLRNSTDNSELEGVVDRADGSAEIQRDFNGLEK
LDLLNVCAKAGTSLSIWGWGSLGLVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLLFGKS
NSEKYLEQCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLR
DYVQYWYYTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFR
KAQQRIAEKGNPMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLY
ILLPPGDFQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNI
IKLSDNIGELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQS
GKEIDTVKLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTA
QQQLEVLQSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLN
HEDPTPEIFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGE
SFNGSPTSSINLSLDDLSNVPTDETVQLHAYISDTGVCNDHGKTYALYAITVHRRNANSE
EMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAYLQLL
LNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSIPDS
LAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCRVAAPIDDNVDDNIPL
RVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADA
VKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRKGILR
VFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFHKLHSRSKQMQRYKQRLHSTQAPS
LQKR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaatggagcctccaggggccaatactggtgccagtcctgcttttcataaggac
ttggctcatggaccagagcataacctcagaaattccacagacaattcagaattggaagga
gtggttgacagagcagatggttctgctgagattcagagggatttcaatgggctagagaaa
ctggatctactgaatgtgtgtgccaaggctgggaccagtctttccatatggggatgggga
agtcttggccttgtgctttttctagtaacttttggacccttcgctatattttactttgca
ttttatatcctctgctttgtgggtgggggttttgtggttactcttttatttggaaaaagc
aattcagaaaaataccttgagcagtgtgaacattcatttctcccttgtacatcggttggg
atccctaagtgcatagaagaaatgaaacgtgaagccagacctattaagattgacagaaga
ctgacaggtgcaaacataattgatgagcctctgcaacaggtaatccagttttccctgaga
gactatgtgcagtattggtattacacacttagtgatgatgaatcctttcttctggaaatt
aggcaggctcttcagtatgcacttgttcagttttctgccaggtcaaaggaaacagactgg
cagccttatttcactacacgacttgttgatgactttggcactcatcttcgagttttcaga
aaagctcagcaaaggatagcagagaaaggcaatccgatgaaagatcaagctgaggaactt
gtagatacattctttgaggttgaagttgaaatggaaaaagaagtctgtcgtgatctagtc
tgcacttctcccaaagatgaagaaggattcctaagggatctgtgtgaggttttactgtat
atattgctacctcctggagacttccagaacaagatcatgcgatactttgtcagggaaatc
ctctcccgaggaattcttcttccattaataaaccagctcagtgatcctgattatattaat
cagtatgtcatatggatgattcgtgattccaactgtaactatgaggcctttatgaatatt
attaaattaagtgataatataggcgagttggaagctgtgaaagataaagcaagtgaagaa
ttgcaatatcttcgatctctagatacagcaggagatgatatcaacactataaaaaatcaa
ataaacagtttattatatgttattaaagtatgtgattcaagaattcagaggttgcagtca
ggaaaagaaatagatactgtgaaactggcagcaaactttggaaaactttgcacggtccct
ctggaccatattctggtagacaatgttgcactacagttttttatggattacatgcagcaa
actggtggccaagcacatctgtttttctggatgacagtggaaggatacagggttacagca
cagcaacaactggaggtacttcagagtcggcagaaagatggaaaacatcagactaatcag
accaagggtctattaagagcagctgcatttggagtttatgagcaatatttatcagaaaag
gcatctccaagagttaatattgatgacaacttagtagcaaaacttgcagaaacactgaac
catgaggatccaacacccgaaatctttgatgacattcagagaaaggtgtatgagttgatg
ctgcgagatgagaggttctacccttcgttcaagcagaacgtgttgtatgtgcgtatgtta
gctgagctggatatgctgaaggatcccagtttcagaggatcagatgatggtgaaggagaa
tcttttaatgggtctcctactagcagcataaatctgtccttagatgacctttcaaatgtc
cccactgatgagaccgttcagctccatgcatacatctcagatactggagtgtgtaatgac
catggcaagacgtacgccctgtacgccatcaccgtccaccggcgaaatgcaaacagcgag
gagatgtggaagacataccggcgctacagcgacttccatgacttccacatgaggatcact
gagcagtttgaaaaccttgcaaatatactaaaacttcctggcaaaaaaacatttaacaac
atggacagagagtttttggaaaagaggaaaaaagacttaaatgcttatttgcagctcttg
ttaaatcctgaaatgatgaaagcttctccagctttagcccattatgtgtatgacttcctg
gagaataaagcctacagcaaagggaagggagattttgcacggaagatggacacgtttgta
aatccactgcgtaactctatgagaaacgtatcaaatgcagtcaagtctatccctgacagc
ctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtcagagagattggga
caagacataaagcaatcatttttcaaggtgccacctctgatgcagaaaacctattcagat
cctgaccattgccgtgttgcagcaccaattgatgacaacgtggatgacaatattccgctg
agagtaatgctcctacttatggatgaagtctttgatttaaaggagagaaatcagtggtta
agaagaaatataaaaaatctgctccagcaacttattagagcaacatatggtgacacaatt
aatagaaaaatagttgatcacgttgattggatgacatctcctgaacaagtagcagatgca
gtgaaacgcttcagagacgctttttggcctaatggtattttagcagaaactgttccacga
agggacaaagctattagaatgagaacaagagtggcagggaaaaccaaattgctggaggta
atgccagatgaactgaagcacatcataggtgctgagactacacggaagggcattcttcgg
gtcttcgaaatgttccagcatagtcagctgaataagagaatggtgtatgtgtttctggag
agattcctagaaaccttatttccacaaaataagttccctgagctgttccacaaactgcat
tcaaggtcaaagcaaatgcagagatataagcagagactacactctactcaagcgccttct
ctacagaaaaggtga
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