Geospiza fortis (medium ground-finch): 102040435
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Entry
102040435 CDS
T03755
Symbol
RMI1
Name
(RefSeq) RecQ mediated genome instability 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102040435 (RMI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102040435 (RMI1)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102040435 (RMI1)
FA (Fanconi anemia) pathway
102040435 (RMI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
102040435
NCBI-ProteinID:
XP_005420902
UniProt:
A0A6I9HI54
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All DBs
Position
Un
AA seq
627 aa
AA seq
DB search
MSTSSIVARVETWLSSTWHVKVPLTWLEACINWIQEENSGSNLSQAQINKQVFEQWLLTD
LRDLEYPILPNCILDTPKGELSGCFSIQIDSLVDVSQPAYSQLQKLRGKSTVNEEVTANT
QTFQKPWEAKPTRMLMLQLTDGVHQIQGMEYQPVPILCSNLPPGTKITVQGNIAYRLGVL
LLKPENVKLLGGEVDALLEDYCQEGVLARLIGEAENPNSVGQAGHEQIFSRPVDELEQTL
GPSDEELLASLDENNEFTLNNRTSLESGYCSKSNNFNTASGSLTAHNGNVLLQKSGSCLP
HSDEQVSPPTEYADDFSNDFPLEDDFLLEEEMQREMEEVPPVEMNRNMGLITGRLPHTSR
SSCNSSLNGAGEEDNVNERDKPREAISNGNNMRRTIFDEDGNSISNFLPHKGLHRTCSSS
AFSLETPPEDRQNYTDLDEGRCKHQHTSDSRVLIDDPVFSLKMDPEGDQQRHDSQIFPCK
AVEAHLDLDSPPFTYISLLLAKKPETVTILKVKCFIVTLTGNLTKSNGSWGIKAKISDGS
AYLEVDFADDILTSFIGFSVPEINKLKKDPTLRLKLKDGLEKCQKQLIDLCCLMTIEFNP
LQSKATVLILQDADARHLEQLKKRLNK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatctagcattgtagcaagagtggaaacctggctttcatccacatggcatgtg
aaagttcctttaacatggctggaagcatgtattaattggatccaggaagaaaacagtggt
agtaatttaagtcaggctcagattaacaagcaggtatttgagcaatggcttcttactgat
ctgagagacttggaatatcccattttgcctaactgcatcttagatactcccaagggagag
ttatcaggctgcttctccatacagattgattcactggtggatgttagccagccagcatat
tctcagttgcagaagctaagagggaaaagcactgtaaatgaagaagtgacagccaatact
cagacatttcagaagccctgggaagcaaagccgactcgaatgctgatgctacaattaaca
gatggcgtacatcaaattcagggcatggagtatcaaccagtgcccattctctgcagtaat
cttcctcctggaacaaaaatcactgtacagggcaatattgcatatcgtcttggagttctt
ctgcttaaaccagaaaacgtgaaactgttgggtggtgaagtggatgctcttcttgaggat
tattgtcaggaaggagtccttgctagattaattggagaagctgaaaaccctaattctgtt
ggacaagctggacatgaacagattttttcaaggcctgtggatgagttagaacaaactctt
ggcccttcagatgaagagcttttagccagccttgatgaaaataatgaatttactttgaac
aacagaacatctttagaaagtggatactgtagtaaaagcaacaattttaatacagcctca
ggttcactgactgcacacaatggaaatgttttgctgcaaaaatctggaagttgtttgcct
cactcagatgagcaagtttcacctcccacagaatatgctgatgacttttcaaatgacttt
cctttagaagatgactttcttctggaagaagagatgcaaagagagatggaagaagtgcca
ccagtggagatgaacagaaacatgggtttaattactggcagacttccacatacatctaga
agctcctgcaattcatctttaaatggcgctggtgaagaagacaatgtgaatgaaagagat
aagcccagagaagctatcagcaatggaaacaacatgagaagaacaatatttgatgaagat
ggaaatagcattagtaactttttgccgcacaagggcttacatcggacctgcagttcatca
gctttctctttggaaactcctcctgaagacaggcagaattatacagacctagatgagggc
agatgtaaacaccaacacacttctgacagcagggtattaattgatgatcctgtattttct
ttaaaaatggatccagaaggagatcagcaaagacatgattcacagatctttccttgcaag
gcagtagaggcacatttagatttagattctccacctttcacatatatttcccttctcctt
gcaaaaaaaccagaaactgttacaattctgaaagttaaatgttttattgtcactctcact
ggaaacctcacaaaaagcaatgggtcctggggtataaaggcaaaaatttctgatggctct
gcttatcttgaagtagattttgctgatgatattctaacaagtttcattggcttttcagtg
cctgaaattaataagctgaaaaaggatcctactttacgtctaaaacttaaggatggttta
gagaaatgtcaaaaacagctgatagatctttgttgtttgatgactattgagtttaatcca
cttcagtctaaagctactgtattaattcttcaggatgctgatgctaggcatctagaacaa
ttgaagaaacgtttgaataaataa
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