Geospiza fortis (medium ground-finch): 102040453 Help Entry 102040453         CDS       T03755                                  Symbol VPS8 Name (RefSeq) VPS8, CORVET complex subunit   KO K20178   vacuolar protein sorting-associated protein 8 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr04148   Efferocytosis Brite KEGG Orthology (KO) [BR:gfr00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     102040453 (VPS8)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gfr04131]     102040453 (VPS8) Membrane trafficking [BR:gfr04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     102040453 (VPS8) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_VPS8 TPR_Vps8 zf_RING_Vps8 VPS8_N TPR_VPS8_2 zf-RING_Vps41 WD40_CDC20-Fz TPR_Vps41 zf-RING_11 Clathrin zf_RING_Vps8_fungal zf-RING_2 zf-RING_UBOX Beta-prop_HPS5 WDR55 ANAPC4_WD40 zf-C3HC4 Motif Other DBs NCBI-GeneID:  102040453 NCBI-ProteinID:  XP_014164148 LinkDB All DBs Position Un AA seq 1425 aa AA seqDB search MXACLSLLYRRRISGYCKRSRCTIAAEDHPETAGRGKEGFPWRRACGGNGSLNLQTPVDV HWLFAVVSDVQIDDKEFDIPQVDTPPTLESILNETDDEEESFILEDPFLLNLDNTDTHSY DTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAI AASNLIAVGTSHGLALIFGKDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAK GQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVR TCESRCLFSGSQGEVCCIEPLHAKVDLRDHPITQYSLLAMASLTKILVIGLKPSLKVWMT FPYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVVYFLLVKRDDSGAIHVTKQRQLHL HYDLINFTWINSRTAVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGN VSEALALVGEKACYQSISSCGGQVFYLGTKSVHVMTLRSWRERVDHLLKQERLTDALALA WSFYEGKAKAVVGLTGDTSKRKAVIADRMVEILLHYTDRTLKKCPDQGKIQVMEQHFQDV VPVIVDYCLLLQRMDLLFSQIYDKMSENSVAKGIFLECLEPYILSDKLTGITAQVMKDLL LHFQDKSRLENLEACIVHMDITSLDIQQVVLLCWENRLYDAMIYVYNSGMNDFISPMEKL FKVIAPPLNAGKSLTDEQVVMGNKLLVYISCSLAGRAYPLGDIPEDLVPLVKNQVFEFLI RLHSAEGSVDEEVYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVM VENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLL ELLQAGGIVQFEESRLIQMAEKAEFYQICEFMYERQLRYDKIIGCYLRDPLRKEEVFNYI HNILSMPGYSAEEKQLVWQKALDHIEELLVLSPGKAADLAAIHFSEQLESIISNLQDQFL LFQFLRSLLDPREGINQDLLHLPPCVTEQFIELLCQYSPDQVLETLKVLECCRLEETIQI TQKHQLHEASSYLLEKKGDIHGAFLVMLERLQSKLLMLTQDDESSAEPSLLENIEDTLMK TIALCQRNSHSLDQQQREALWFPLLEAMMSPQKSSGSSQCPHSESLKSLTMQVLNNMAAF IALPSILQRILQDPVYGKGKLGEIQGLVLGMLDTFNYEQTLLETTTSLLNHDLHWSLCNL RASVTRGLTPKQDFCCICLQQYKRRQETADEIIVFSCGHLYHSLCLLSKDCGVVTKGLMR WMCYKCNSSNKGGKLSENFSELKKGTAASLAQMSSESVLDPQQIQAFDQLCRLNRGTSRL ALLTELARGDKHGLLSISHGDPATSSVFQNENFQLHLMPPPLAEE NT seq 4278 nt NT seq  +upstreamnt  +downstreamnt atgtgagcctgtctttctcttttatacaggaggagaattagtggctattgtaagaggagc agatgcaccattgctgcagaagaccatcctgaaacagctggcaggggaaaggaagggttt ccatggaggagagcctgtggtggtaatgggtcactgaaccttcaaacacctgtagatgtg cactggctttttgctgtggtttctgatgtacagattgacgacaaagaattcgacattcct caagttgatacccctccaacgctggagagcatcctaaatgagactgatgatgaagaagag tctttcattttggaggacccctttctcttgaaccttgataacacagatacacactcctat gacacctcttctgtggccagctctgacagtggggacaggacacacctgaaaaggaagaaa aaactcccagattctctctcactccatggatcagtgatccggctctcactcctgaaaggg atttctgcccaaatagtgtctgcagcagacaaagtggatgctggcttgcccactgcaatt gcagcatcaaatctgatagcagtggggacttcccatgggttagcactgatatttggcaaa gatcagaaccaggctctccggctgtgtctgggcagcaccgcagttggggcccagtacggg gccatctctgctctcagcatcaacaatgactgctccaggctgctctgtggctttgcaaaa ggacagatcaccatgtgggatctggccagtgggaagctgctgcgatcaataacagatgcc caccctccaggaacagccattttgcacatcaagtttacagatgatccgacactcgcaatc tgcaatgacagcggaggctccgtgtttgaactgtcatttaagagggttatgggagtgagg acgtgcgagtctcggtgtctcttcagtggctcccagggggaagtttgctgtattgagcca ttacatgcaaaggttgatttgagagaccatcctatcacccagtattcactgctggccatg gcctccctcaccaagatcctggttattggcctgaagccatctttgaaagtgtggatgacc tttccctatggccgtatggacccttcgagtgtccctctgctggcgtggcactttgtggct gtgcagaactcggtgaaccccatgcttgccttctgtcgaggagatgtcgtgtacttcctt ctggtcaagagggatgatagtggtgcaatacatgtcacaaagcagaggcagcttcatctg cactatgatctcatcaactttacttggatcaactcacggacagcagtgctgctggacagt gtggagaagctgcacgtcatagaccgccagactcaggaggagctggagaccatcgagatc tcagaggttcagctggtctacaacagcagccacttcaagtctctggccacggggggcaat gtcagcgaggccttggcactggttggagagaaggcttgttaccagtccatcagcagctgt ggtggtcaggtcttttaccttggaactaagtccgttcatgtcatgacattgagaagctgg agagagagagttgaccaccttctgaaacaagaacgtctcacagatgctctggctcttgct tggtccttttatgaaggtaaagcaaaggctgttgtaggcttgactggggacacgagcaag aggaaagcagtcattgctgacagaatggttgaaatccttctccattacactgatcggact ctgaagaaatgtcctgaccaaggaaaaatccaggttatggagcagcactttcaggatgtg gtgcctgtcatcgtggattactgtctcctgctgcagcgcatggatctattatttagccag atatatgacaagatgagtgagaactctgtagccaaaggcatctttctggagtgcttggag ccctatatcttgagtgataagctgacgggaatcacagctcaagtgatgaaagacttgctg cttcacttccaagacaagagcaggttggaaaacttggaagcctgcattgtgcatatggat atcaccagtttagacatccagcaggtggttctgctgtgctgggagaaccgcctgtacgat gccatgatctacgtctacaacagtgggatgaatgacttcatcagccccatggagaagctg ttcaaagtcattgctcctccactgaatgctggaaagtctctcacagatgagcaggtggtg atgggcaacaagctgcttgtgtatataagctgctccttggcaggccgtgcatatccattg ggtgatattcctgaagatctggtacctctggtgaaaaatcaggtgtttgagttcctgatc aggctgcactcagctgagggctctgtggatgaggaggtgtatccctacgttcggaccctg ctgcactttgacacacgggaattcctcaacgtgctggctctgacttttgaagacttcaag aatgataagcaagctgtggagtatcaacagagaattgtggacattcttctgaaagtcatg gtggagaattctgacttcaccccatcacaggttggctgtctctttaccttccttgcccgg cagctcgccaagcccaacaacaccttgtttgtcaacaggacactgtttgaccaggtgctg gagttcctgtgcagcccggatgacgactcccggcattccgagaggcagcaggtccttttg gagctgctccaggcaggagggatcgtgcagtttgaagagagccgccttatccaaatggca gagaaggctgagttctatcagatctgtgagttcatgtatgagcggcagcttcgctatgac aaaatcatcggctgttacctgcgggatcccctgaggaaggaagaagttttcaactacatt cacaacatcctgtccatgcctggctacagtgcagaggagaagcagctggtgtggcagaaa gctttggaccatatagaggagctgctggtgctgagcccaggtaaagcagctgacctggca gccattcacttcagtgagcagctcgagagcatcatctccaacctgcaggaccagttcttg ctcttccagttcctgaggagtcttcttgatccgagagaaggcattaaccaggacctgcta cacctcccaccctgtgtcactgagcagttcatcgagctgctctgtcagtacagcccagac caggttttggagacactcaaggttctggaatgctgcagactggaggaaaccatccagata acccaaaaacatcagctccatgaagcttcctcatatttactagagaagaagggagatatc catggtgcctttttggttatgcttgagcgattgcagagcaagttgctgatgcttactcaa gatgatgaaagctcagctgaaccctccttgctagaaaatattgaagatactttaatgaaa acaattgctctttgccagaggaattcacacagtttagaccagcaacagcgagaggccctc tggtttcccctgcttgaggccatgatgtccccacagaaatcctctggttcatcacagtgt ccacactctgaatctttgaagagtttgacaatgcaagtgctgaacaacatggctgcattt attgctctgccctcaatcctgcagagaattctccaggatccagtttatggaaaagggaaa cttggagaaattcaagggcttgtcctgggaatgctggacacttttaactatgaacaaacc ctgctagagacaaccacgagccttttaaaccacgatctccactggtccctgtgtaacctg agagcctctgtcaccagaggccttaccccaaagcaggatttctgctgcatctgtctccag cagtacaaaaggaggcaagaaactgcggatgaaatcattgttttcagctgtggccacttg taccactcgctgtgcctgctgagtaaggactgtggggtggtcaccaagggcctcatgagg tggatgtgctacaaatgcaactccagcaacaagggagggaagctgagtgagaacttctca gagctgaagaaagggactgcagcctccctggcacagatgagttcagagtctgtattggat cctcagcaaatccaagcttttgaccagctctgccgactcaaccgaggcacttcccgactg gctctcctgacggagctggcacgtggtgacaagcacgggctgctcagcatttcccacggg gacccggccaccagcagcgtcttccagaatgagaacttccagctgcacctgatgccccct ccgctggctgaagagtag

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