Geospiza fortis (medium ground-finch): 102040458
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Entry
102040458 CDS
T03755
Symbol
SIAH1
Name
(RefSeq) siah E3 ubiquitin protein ligase 1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04115
p53 signaling pathway
gfr04120
Ubiquitin mediated proteolysis
gfr04137
Mitophagy - animal
gfr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102040458 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102040458 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102040458 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
102040458 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102040458 (SIAH1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102040458 (SIAH1)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
102040458 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
102040458
NCBI-ProteinID:
XP_005426495
UniProt:
A0A6I9HNS9
LinkDB
All DBs
Position
Un
AA seq
313 aa
AA seq
DB search
MTGRSASSGPYSWKGVWSACLPGSKTCKGKEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcagatccgcctccagcgggccgtactcctggaagggcgtctggtctgcgtgc
ttgccggggagtaaaacctgcaagggaaaagaaatgagccgtcagaccgctacagcacta
cccacaggtacctccaagtgcacgccatcgcagagggtgcccgcgctgacgggcaccaca
gcctccaacaatgacttggccagtctctttgagtgtcccgtgtgctttgactatgtgctg
ccacccatcctgcagtgtcagagtggccacctggtctgtagcaactgtcgccccaagctc
acgtgctgccccacttgccgaggcccgctgggctccatccgtaacctggccatggagaaa
gttgccaattccgtactattcccgtgtaaatacgcctcttccggctgcgagataactttg
ccacacacagaaaaagcagaccacgaggagctgtgtgagtttaggccttactcctgtccc
tgtcctggtgcttcgtgtaaatggcaaggctctctggatgctgtaatgccgcacctgatg
catcagcataagtcaattacgacgctgcagggagaagatatagtgttcctggccacggac
attaatcttcctggtgctgttgactgggttatgatgcagtcttgttttggctttcatttc
atgctagtgttggagaaacaggaaaagtatgatggtcaccagcagttctttgcaattgta
cagctgataggaacgcgcaagcaagcagaaaactttgcttatcgactcgagctaaacggg
cataggcggcgattgacttgggaagcaactcctcgatccattcatgagggaattgcaaca
gccattatgaatagtgactgtctagtctttgacaccagcattgcacagctctttgcagaa
aatggcaatttaggcatcaacgtaactatatccatgtgttga
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