Geospiza fortis (medium ground-finch): 102040536
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Entry
102040536 CDS
T03755
Symbol
RRP12
Name
(RefSeq) ribosomal RNA processing 12 homolog
KO
K14794
ribosomal RNA-processing protein 12
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102040536 (RRP12)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
90S particles
Other 90S particles
102040536 (RRP12)
Pre-60S particles
Other pre-60S particles
102040536 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
102040536
NCBI-ProteinID:
XP_005417405
LinkDB
All DBs
Position
Un
AA seq
1295 aa
AA seq
DB search
MGQRMLQCLSPCEAPQSHGHTSKCCCGVWYDEERDKLTFSRPHDGEAEKSNLTVDAVKLH
NELQSGSLRLERAGDSAQRMEEGSAEEAATEKSSGTFLSGLSDCTNVTFSKVQRFWESNS
AAHKEICAVLAAVTEVIRSRGGKESETEYFAALMTTLEAVESPESLSAVAYLLNLVLKRV
PSPVLIKKFSDASKAFMSIVSSQACSSSTSALRWVLSCLATLLRKQDLAAWSYPVTLQVY
HGLLSFCVHTKPKVRKAAQHGVCSVLRGSEFMFGDAAPEHHPAAPSTAKFCVQEIEKAGG
AKEATTTLHVLALLRDVLPCFPAAVVKTCCETLLRVMTLSHVLVTACAMQAFHSLFSAQA
SVACLPAELNAQIITALYDYVPSTSDLQPLLTWLSTMERAHINLGRLQKDLCWAHLPRLF
SAAMNCFLSPHSQVVSAAAQTLETILSECIAPHMEDVGTVSASAPAPAAYLCKMFRSVEE
GLTYRFHAAWDEVLRVLEVFFETCGKQCHPIMRKCLQSLCDLRLSPHFPYTAEVDQAVGA
AVSTMGPEVLLEAVPLEINGKEETLDFPRSWLLPVLRDNVQGARLGFFTSYFLPLAATLK
SRALEFTQAGKSVEAKIYDTLQWQVWTLLPGFCTHPTDVLGAFKGLARTLGMAISERPDL
RPTVCQALRTLIHKGCQTDAERAEVGRFAKNFLPILFNVYSQAEEDGGTSAQRRSVLDTV
RAYLTITDPQMVCGFLEKASAKLTSPESSEFARLSILDLVVAMAPYADEQSLDSLYRTIQ
PSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVHSHLQELQAALLDSLKSAASPAKRPRL
KCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSVGARKNAFMLLVEMGHAFIRFGPTPEE
AMQRFLLLIYVGLTGSVTVISCTVLALTRLFFEFKDHLEFSVVEQLLQNICLLLASRTRD
VVKAALGFLKVTLLLVDTKLLAKHVQTMLEAVGNLSDDMRRHFRMKLRNLFIKFIRKFGF
ELVKGLLPAEYHKVLVNIRKAESRSRKQRALKKAAADMDEEEAPAPQPRGDSMEEILADS
EDEEEEEEERHRSKEWRKQARQKGQAWLKEGEDDEPLNFLDPNVSQRVLATKPGPKRSRG
VSHDFQMSEDGRLIIHEEEEELDDDEGKGADEEMADVLQDVGLRSKKSQKRRFREEPDDE
EAEGGASSQYRAGGSGIHRPLNKVPAFGAEYRSKKGKGDVKKKGQLDPYAYIPLNRAKLN
RRKRAKMQGQFKGLMKGAQRGAKAGRRNRLKSQRS
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcgcatgctgcagtgcctgtcgccctgcgaggctccccaaagccatggccat
acgtccaagtgctgctgtggtgtctggtatgatgaggaacgtgacaaactaacattcagc
cggccacatgatggggaagcagagaaaagtaacctgacggtggatgcagtgaagctgcac
aatgagctgcagtcggggtccctgcgtctggagcgggcgggtgacagcgcccagcgtatg
gaggagggcagtgctgaggaggctgccacagagaaatcctccggcaccttcctgagcggg
ctgagcgactgcaccaacgtcaccttcagcaaggtgcagcgcttctgggaatccaactct
gctgctcacaaagagatctgtgccgtgctggcggctgtgacagaggtgatccgctcccgg
ggcggcaaggagagcgagacagaatactttgctgctctgatgaccacgctggaggcagtg
gagtcccccgagtcactgtctgctgtagcctacctgcttaaccttgtcctaaagagggtc
ccgagccctgttcttattaaaaagttctcagatgcctcaaaagccttcatgagtatcgtg
tcctcgcaggcctgcagcagctccacctctgccctgcgatgggtgctctcttgcctggcc
acactgctacggaagcaagacttggcagcctggagctaccctgtcaccctgcaggtctat
catggcttgttgagcttttgtgttcacaccaagcccaaggtgcggaaagcagcgcagcat
ggcgtgtgctctgtcctgaggggcagcgagttcatgtttggtgatgcagcccctgagcat
caccctgcagcaccttccactgccaagttctgtgtgcaggagattgaaaaagctggaggt
gccaaggaggccaccaccaccctgcatgtccttgccctgctgcgggacgtgctgccctgc
ttccctgcagctgtggtgaagacctgctgtgagaccttgctccgagtcatgacccttagc
catgtgctggtgacagcatgtgccatgcaagctttccacagcctcttcagcgcccaggcc
agtgtggcctgcctgccagctgagctcaatgcccagatcatcactgctctctacgactac
gtgcccagtacgagtgacctgcagccactgctgacctggctgtccaccatggagagggct
cacatcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccggctcttc
tctgctgccatgaactgcttcctctccccacactcccaggtggtgtcagcagcagcacag
accctggagaccatcctgagtgagtgtattgctccccacatggaggatgtgggcactgtg
tctgcatctgccccagcccctgctgcctacctgtgcaagatgttcagatcagtggaggaa
gggctgacataccgtttccatgcagcgtgggatgaagttctacgagtgttggaggtcttc
tttgagacatgtgggaagcagtgccatcccatcatgaggaagtgtctccagtccctgtgt
gacctgcgtctctccccacacttcccctacactgctgaagtggaccaggcagtgggggct
gctgtgagcaccatgggtcctgaggtgctcctggaagctgtgcccctggagatcaatggc
aaggaggagacgctggatttcccccgcagctggctcctgccggtgctgcgggacaacgtg
cagggagcacgccttggcttcttcaccagctacttcctgcctttggcagccaccctgaaa
agcagagccctggagtttacccaggctgggaagagtgtggaggccaagatctacgacacg
ctgcagtggcaggtctggactctgcttcctggcttctgcacgcatcccacagatgtgctg
ggggccttcaaggggctggcccgcaccctgggcatggccatcagtgagcgccccgatctc
cgccccacggtgtgccaggccttgcgcaccctcatccacaaaggctgccagacagatgcg
gagcgggcagaagtgggtcgctttgccaaaaatttcctgcccatcctgttcaatgtgtac
agccaagccgaggaggatgggggcacaagtgctcagcgccgctctgtgctggacactgtc
cgtgcttacctgaccatcactgatcctcagatggtgtgtggattcctggagaaagccagt
gcaaagctgaccagtcccgagagctccgagtttgccagactctccatcctggacctggta
gtggcaatggcaccctatgctgatgagcagtccctggactccttgtaccgtaccatccag
ccttccctccagagcaaagagcgcagcatgcagaagaaggcataccgtgtgctggaggag
gtgtgtgctgctccccacgctccctgccaggccttcgtccactcccacctccaggagctg
caggcagcgctgctggactcgctcaagagcgcagcatccccggctaagaggccacggctg
aagtgcctgttccacattgtgaagcagctatctgcagagcacgagccttttgtcactgcc
ctggtcccagaggtcatcctgtgcaccaaggaggtgtcagtgggggcccgcaagaacgcc
ttcatgctgctcgtggagatgggccatgctttcatccgctttgggcccacccctgaagag
gccatgcagcgcttcctgctcctcatctacgtggggctcactggctcagtcaccgtgatc
agctgcaccgtgctggcactgacccgcctgttcttcgagttcaaagatcacctggagttc
agtgtggtggagcagctcctgcagaacatctgcctgttgctggcctcccgcacacgggat
gtggtcaaggcagccctgggattcctgaaggtcacactgctgctggtggacaccaagctc
ctggccaagcatgtccagacaatgctggaggctgtggggaacctctcagatgacatgagg
cgccacttccgtatgaagctgcgaaacctcttcatcaagttcatccgcaagtttggcttt
gagctggtcaaggggctgctgccagctgagtaccataaggtgctggtgaacatccgcaag
gcggagtcccggagccgcaagcagcgtgccctgaagaaggcagctgcagatatggacgag
gaggaggcaccagcaccacagcccagaggagacagtatggaggagatcctggctgactca
gaggacgaggaggaggaagaggaggaacggcatcggagcaaggagtggaggaagcaagca
cggcagaagggccaggcatggctcaaggaaggggaagatgatgagcccctcaacttcctg
gaccctaatgtgtcccagcgggtgctggccaccaagccaggccccaagcggtctagagga
gtgagccatgacttccagatgtctgaggatggacgcctgatcatccatgaagaggaagag
gagctggatgatgatgaaggcaaaggagcagatgaggagatggcagatgtgctgcaggat
gtggggctccgcagtaagaaaagtcagaagcgtcggttcagagaggagccagacgacgag
gaagctgagggtggagcctcttctcagtatagagctggaggctctgggatccatcggccg
ctgaacaaggtgccagcctttggtgcagagtatagatccaagaaaggtaaaggtgatgtg
aagaagaagggccagctcgacccctatgcctacatccccctgaacagagctaaactcaac
agaaggaagcgggcgaaaatgcagggccagttcaagggcctgatgaagggagcccagcgc
ggggccaaggccggccgcaggaaccgtctgaagtcccagcgctcctga
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integrated database retrieval system
