Geospiza fortis (medium ground-finch): 102040548
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Entry
102040548 CDS
T03755
Symbol
USP5
Name
(RefSeq) ubiquitin specific peptidase 5
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102040548 (USP5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102040548 (USP5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102040548 (USP5)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102040548 (USP5)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102040548 (USP5)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102040548 (USP5)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102040548 (USP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP
zf-UBP_var
UCH_1
UBA_9
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
102040548
NCBI-ProteinID:
XP_014162330
UniProt:
A0A6I9Z991
LinkDB
All DBs
Position
Un
AA seq
810 aa
AA seq
DB search
MNTFLGFGKQYVEKHYQKTGQRVYLHLKRTRKPKEEDTNSSAGDPPRKKPTRLAIGVEGG
FDITEEKFEYDEDVKIVILPDHLDIPRDGLEGLPDMVKDRIASAIEAILTADSASRKQEV
QAWDGEVRRVSKHAFSLHQLQNDVRIPPCGWKCSKCDMKENLWLNMTDGAILCGRRYFDG
SGGNNHAVEHYRETGYPLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLAHFGIDMLKM
QKTDKTMTELEIDMNQRIGEWELIQESGVQLKPLYGPGYTGIRNLGNSCYLNSVMQVLFS
IPDFQRKYVDKLEKIFQSAPSDPTQDFSTQVAKLGHGLLSGEYSRPASADGEQQPDQKGM
QNGIAPRMFKSLIGKGHPEFSTNRQQDAQEFFLHFINMVERNCRSSENPNEVFRFLVEEK
LKCLATEKVKYTQRVDYIMQLPVPMDAALNKDELLEYEEKKRQAEEEKQPLPELVRAKVP
FSSCLEAYGAPEQVDDFWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLD
VSIEMPEELDISALQGTGLQEGEEEMPDIAPPLVTPDEPKGSLGFYGNEDDDSFCSPHFS
SPTSPMLDESVIIQLVEMGFPMDACRKAVYYTGNSGVEAAMNWVMSHMDDPDFANPLVLP
GSSGPGSTIACPDPPSEDSVATIVSMGFSRDQAMKALRATNNSLERAVDWIFSHIDDLDA
EAAMDISEGRSAAESISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKDGR
WVIYNDQKVCASEKPPKDLGYIYFYQRIPS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgttcctgggctttgggaagcagtatgtggaaaagcactatcagaaaacaggc
cagcgggtctacctgcacctcaaaagaacacgtaaaccgaaggaagaagacaccaactcc
agtgctggggaccctccaaggaagaaaccaactcgcttggccattggtgtagaaggcgga
tttgacatcacagaagaaaagtttgaatatgatgaagatgtaaaaatagtgattttgcca
gaccatttggatattccacgtgatgggctggagggactaccagacatggtcaaagacagg
attgccagtgcaattgaggccatcctgacagcagattcagcctcacggaagcaggaggtg
caggcctgggatggggaggttcgccgtgtttccaagcacgctttttccctgcaccagctt
cagaacgatgtccgcatcccaccgtgtggctggaagtgcagcaagtgtgacatgaaggag
aacctgtggctgaacatgactgacggagccatcctctgtggtcggcgctacttcgacggc
agcggcggcaacaaccacgcggtcgagcactaccgagaaaccggctaccctctggctgtg
aaactgggaacaatcactcctgatggggcagatgtctactcctatgatgaggatgacatg
gtgttggatcccaacctggcagaacacctggcacactttgggattgacatgcttaagatg
cagaagacagacaagacaatgacagaactggaaatagacatgaaccagcgcattggcgag
tgggagctcatccaggagtctggtgttcagctcaagcccctctatgggcctgggtacact
ggcatccgtaacctgggcaacagttgctacctcaattctgtgatgcaggtgctgttcagt
atcccagacttccagagaaagtatgtggacaagctggagaagatattccaaagtgcacct
tcggaccccacgcaggatttcagcacacaagtagccaaactgggccatggcctgctttct
ggggagtattcaaggccagcttctgcagatggggagcagcagcctgatcagaagggtatg
caaaatggcattgctccacgcatgtttaagtccctcatcggaaaggggcacccagaattt
tccactaaccgacagcaggatgcccaggaattctttctgcacttcatcaacatggtggag
aggaactgccgcagctcggagaaccctaacgaggtcttccgttttctggtggaggagaag
ctgaagtgcctggccacagaaaaggtgaaatatacccagcgtgtggactacattatgcag
ctgcctgtgcccatggatgctgcactcaacaaagatgaactgctggagtatgaggagaag
aagaggcaggcagaagaggagaagcagccgctgcctgagctggtgcgagccaaggtgcct
ttcagctcctgcctagaggcctatggagctccagagcaggtggatgatttctggagcaca
gccttgcaggccaagtctgtggctctcaaaacgacgcggttcgcctctttcccagattat
ctggtcatccagatcaagaagttcactttcggtctggactgggtgcccaaaaagctcgat
gtttccattgaaatgccagaggagctggatatctctgcactgcagggaacggggctgcaa
gaaggagaagaggaaatgccagacatcgcacccccactggtgacaccagatgagcccaaa
ggtagcctggggttctatggcaacgaggacgacgactccttctgctcccctcacttctcc
tctccgacatcacccatgctggacgagtcggtgattatccagctagtggaaatgggcttt
cccatggatgcctgccgcaaagccgtgtattacacagggaacagtggggttgaggcggcc
atgaactgggtcatgtcacatatggacgatccagactttgctaacccgttagttctccct
ggatccagtgggccagggtcaactattgcctgcccagaccctccttcagaagacagtgtg
gccaccattgtctccatgggcttctcccgggaccaggcgatgaaagcgcttagagccacg
aacaacagtctggagcgtgctgtggattggatcttcagtcacattgatgaccttgatgca
gaagctgctatggatatctcagaggggcgctcggcagccgagtccatctctgagtccgtc
cccgtgggtcccaaagtgcgcgatgggcctggaaaatatcagctgtttgccttcatcagc
cacatgggcacttcaactatgtgcggacattatgtttgtcacatcaagaaagatggcagg
tgggtgatctacaacgaccagaaagtctgtgcttctgagaagccccccaaggacctgggc
tacatctacttctaccagcggattcccagctag
DBGET
integrated database retrieval system
